Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNA5SP268-201ENST00000516828 124 ntBASIC2□□□□□ -2.09
TRIM35Q9UPQ4 BX248123.2-201ENST00000606318 124 ntBASIC1.99□□□□□ -2.09
TRIM35Q9UPQ4 SNORA70.25-201ENST00000612741 95 ntBASIC1.99□□□□□ -2.09
TRIM35Q9UPQ4 SNORA36.1-201ENST00000363424 132 ntBASIC1.98□□□□□ -2.09
TRIM35Q9UPQ4 RNU6-742P-201ENST00000365289 107 ntBASIC1.98□□□□□ -2.09
TRIM35Q9UPQ4 RNU6-721P-201ENST00000410155 105 ntBASIC1.98□□□□□ -2.09
TRIM35Q9UPQ4 AC098934.3-201ENST00000430450 190 ntBASIC1.98□□□□□ -2.09
TRIM35Q9UPQ4 MIR125B1-201ENST00000385236 88 ntBASIC1.97□□□□□ -2.09
TRIM35Q9UPQ4 RNU6-995P-201ENST00000391244 107 ntBASIC1.97□□□□□ -2.09
TRIM35Q9UPQ4 HMGN2P22-201ENST00000427588 175 ntBASIC1.97□□□□□ -2.09
TRIM35Q9UPQ4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.97□□□□□ -2.09
TRIM35Q9UPQ4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
TRIM35Q9UPQ4 RNU6-945P-201ENST00000383947 107 ntBASIC1.96□□□□□ -2.1
TRIM35Q9UPQ4 MIR320A-201ENST00000385302 82 ntBASIC1.96□□□□□ -2.1
TRIM35Q9UPQ4 SNORA25-201ENST00000384384 134 ntBASIC1.95□□□□□ -2.1
TRIM35Q9UPQ4 MIRLET7B-201ENST00000385140 83 ntBASIC1.95□□□□□ -2.1
TRIM35Q9UPQ4 MIR7107-201ENST00000611489 80 ntBASIC1.95□□□□□ -2.1
TRIM35Q9UPQ4 RNY1P8-201ENST00000383970 114 ntBASIC1.94□□□□□ -2.1
TRIM35Q9UPQ4 MIR548AA1-201ENST00000384971 97 ntBASIC1.94□□□□□ -2.1
TRIM35Q9UPQ4 MIR3122-201ENST00000577243 73 ntBASIC1.94□□□□□ -2.1
TRIM35Q9UPQ4 MIR676-201ENST00000390702 67 ntBASIC1.93□□□□□ -2.1
TRIM35Q9UPQ4 MIR1304-201ENST00000408243 91 ntBASIC1.93□□□□□ -2.1
TRIM35Q9UPQ4 RNA5SP458-201ENST00000516188 119 ntBASIC1.93□□□□□ -2.1
TRIM35Q9UPQ4 SNORD53B-201ENST00000577887 78 ntBASIC1.93□□□□□ -2.1
TRIM35Q9UPQ4 AL096840.1-201ENST00000603287 93 ntBASIC1.93□□□□□ -2.1
TRIM35Q9UPQ4 SNORA49-201ENST00000386157 136 ntBASIC1.92□□□□□ -2.1
TRIM35Q9UPQ4 AP1B1P2-201ENST00000416196 106 ntBASIC1.92□□□□□ -2.1
TRIM35Q9UPQ4 AL354695.1-201ENST00000427935 228 ntBASIC1.92□□□□□ -2.1
TRIM35Q9UPQ4 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
TRIM35Q9UPQ4 SNORD45.2-201ENST00000363552 72 ntBASIC1.91□□□□□ -2.1
TRIM35Q9UPQ4 SNORD114-29-201ENST00000364819 70 ntBASIC1.91□□□□□ -2.1
TRIM35Q9UPQ4 SNORA67.6-201ENST00000391093 99 ntBASIC1.91□□□□□ -2.1
TRIM35Q9UPQ4 RNU7-95P-201ENST00000459222 64 ntBASIC1.91□□□□□ -2.1
TRIM35Q9UPQ4 MIR18A-201ENST00000362310 71 ntBASIC1.9□□□□□ -2.11
TRIM35Q9UPQ4 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
TRIM35Q9UPQ4 RNU6-1262P-201ENST00000516217 96 ntBASIC1.9□□□□□ -2.11
TRIM35Q9UPQ4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
TRIM35Q9UPQ4 SNORA31.24-201ENST00000517232 57 ntBASIC1.89□□□□□ -2.11
TRIM35Q9UPQ4 MIR4752-201ENST00000579672 72 ntBASIC1.89□□□□□ -2.11
TRIM35Q9UPQ4 MIR5706-201ENST00000579841 80 ntBASIC1.89□□□□□ -2.11
TRIM35Q9UPQ4 Y_RNA.139-201ENST00000363464 102 ntBASIC1.88□□□□□ -2.11
TRIM35Q9UPQ4 MIR7111-201ENST00000619751 72 ntBASIC1.88□□□□□ -2.11
TRIM35Q9UPQ4 RNU6-59P-201ENST00000384787 107 ntBASIC1.87□□□□□ -2.11
TRIM35Q9UPQ4 MIR19B1-201ENST00000384829 87 ntBASIC1.87□□□□□ -2.11
TRIM35Q9UPQ4 RNU6-782P-201ENST00000516852 104 ntBASIC1.87□□□□□ -2.11
TRIM35Q9UPQ4 RNA5SP94-201ENST00000516917 108 ntBASIC1.87□□□□□ -2.11
TRIM35Q9UPQ4 RNU6-894P-201ENST00000517094 105 ntBASIC1.87□□□□□ -2.11
TRIM35Q9UPQ4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.87□□□□□ -2.11
TRIM35Q9UPQ4 RNU4-45P-201ENST00000365469 141 ntBASIC1.86□□□□□ -2.11
TRIM35Q9UPQ4 MIR200A-201ENST00000384875 90 ntBASIC1.86□□□□□ -2.11
TRIM35Q9UPQ4 RNA5SP61-201ENST00000516453 100 ntBASIC1.86□□□□□ -2.11
TRIM35Q9UPQ4 RNU6-502P-201ENST00000362419 108 ntBASIC1.85□□□□□ -2.11
TRIM35Q9UPQ4 Y_RNA.338-201ENST00000365320 114 ntBASIC1.85□□□□□ -2.11
TRIM35Q9UPQ4 RNU6-1008P-201ENST00000384160 104 ntBASIC1.85□□□□□ -2.11
TRIM35Q9UPQ4 MIR29B1-201ENST00000385015 81 ntBASIC1.85□□□□□ -2.11
TRIM35Q9UPQ4 RNA5SP327-201ENST00000362494 101 ntBASIC1.84□□□□□ -2.11
TRIM35Q9UPQ4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.84□□□□□ -2.11
TRIM35Q9UPQ4 RNU6-1267P-201ENST00000410747 107 ntBASIC1.84□□□□□ -2.11
TRIM35Q9UPQ4 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TRIM35Q9UPQ4 AL353803.5-201ENST00000599815 141 ntBASIC1.83□□□□□ -2.12
TRIM35Q9UPQ4 RNU1-29P-201ENST00000606574 126 ntBASIC1.83□□□□□ -2.12
TRIM35Q9UPQ4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.83□□□□□ -2.12
TRIM35Q9UPQ4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.83□□□□□ -2.12
TRIM35Q9UPQ4 MIR378A-201ENST00000362177 66 ntBASIC1.82□□□□□ -2.12
TRIM35Q9UPQ4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.82□□□□□ -2.12
TRIM35Q9UPQ4 SNORD124-201ENST00000459577 104 ntBASIC1.82□□□□□ -2.12
TRIM35Q9UPQ4 RNU7-188P-201ENST00000517063 64 ntBASIC1.82□□□□□ -2.12
TRIM35Q9UPQ4 AC138207.3-201ENST00000585289 166 ntBASIC1.82□□□□□ -2.12
TRIM35Q9UPQ4 Y_RNA.226-201ENST00000364337 114 ntBASIC1.81□□□□□ -2.12
TRIM35Q9UPQ4 MIR4421-201ENST00000578133 69 ntBASIC1.81□□□□□ -2.12
TRIM35Q9UPQ4 AC011195.1-201ENST00000578177 177 ntBASIC1.81□□□□□ -2.12
TRIM35Q9UPQ4 MIR548H4-201ENST00000408689 111 ntBASIC1.8□□□□□ -2.12
TRIM35Q9UPQ4 RNU6-175P-201ENST00000516896 107 ntBASIC1.8□□□□□ -2.12
TRIM35Q9UPQ4 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
TRIM35Q9UPQ4 SNORD57-201ENST00000448188 72 ntBASIC1.78□□□□□ -2.12
TRIM35Q9UPQ4 AC068338.1-201ENST00000565567 176 ntBASIC1.78□□□□□ -2.12
TRIM35Q9UPQ4 AC108676.2-201ENST00000605225 163 ntBASIC1.78□□□□□ -2.12
TRIM35Q9UPQ4 RNU6-974P-201ENST00000384099 108 ntBASIC1.77□□□□□ -2.13
TRIM35Q9UPQ4 MIR1287-201ENST00000408492 90 ntBASIC1.76□□□□□ -2.13
TRIM35Q9UPQ4 SNORD99-201ENST00000408612 74 ntBASIC1.76□□□□□ -2.13
TRIM35Q9UPQ4 MIR4498-201ENST00000577599 66 ntBASIC1.76□□□□□ -2.13
TRIM35Q9UPQ4 MIR4432-201ENST00000581823 84 ntBASIC1.76□□□□□ -2.13
TRIM35Q9UPQ4 MIR3660-201ENST00000584845 100 ntBASIC1.76□□□□□ -2.13
TRIM35Q9UPQ4 snoU13.31-201ENST00000607291 104 ntBASIC1.76□□□□□ -2.13
TRIM35Q9UPQ4 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
TRIM35Q9UPQ4 U7.6-201ENST00000610841 64 ntBASIC1.75□□□□□ -2.13
TRIM35Q9UPQ4 RNU6-1036P-201ENST00000383959 104 ntBASIC1.74□□□□□ -2.13
TRIM35Q9UPQ4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.74□□□□□ -2.13
TRIM35Q9UPQ4 RNA5SP255-201ENST00000516370 107 ntBASIC1.74□□□□□ -2.13
TRIM35Q9UPQ4 Y_RNA.118-201ENST00000363300 101 ntBASIC1.73□□□□□ -2.13
TRIM35Q9UPQ4 SNORD115-23-201ENST00000364461 82 ntBASIC1.73□□□□□ -2.13
TRIM35Q9UPQ4 RNU6-997P-201ENST00000384725 107 ntBASIC1.72□□□□□ -2.13
TRIM35Q9UPQ4 Y_RNA.698-201ENST00000516798 118 ntBASIC1.72□□□□□ -2.13
TRIM35Q9UPQ4 MTRNR2L9-201ENST00000622562 75 ntBASIC1.72□□□□□ -2.13
TRIM35Q9UPQ4 U7.5-201ENST00000517224 61 ntBASIC1.71□□□□□ -2.14
TRIM35Q9UPQ4 SNORD114-24-201ENST00000365029 72 ntBASIC1.7□□□□□ -2.14
TRIM35Q9UPQ4 AC069271.1-201ENST00000445577 156 ntBASIC1.7□□□□□ -2.14
TRIM35Q9UPQ4 MIR4285-201ENST00000581001 85 ntBASIC1.7□□□□□ -2.14
TRIM35Q9UPQ4 SNORD63.1-201ENST00000516178 80 ntBASIC1.69□□□□□ -2.14
TRIM35Q9UPQ4 RNU6-530P-201ENST00000391180 107 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 208.3 ms