Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AC243829.6-201ENST00000612652 106 ntBASIC1.19□□□□□ -2.22
PCDHGC3Q9UN70 RNU6-110P-201ENST00000384508 104 ntBASIC1.18□□□□□ -2.22
PCDHGC3Q9UN70 RNU6-1053P-201ENST00000515930 101 ntBASIC1.18□□□□□ -2.22
PCDHGC3Q9UN70 SNORA75.1-201ENST00000391130 148 ntBASIC1.17□□□□□ -2.22
PCDHGC3Q9UN70 RNU6-229P-201ENST00000516614 102 ntBASIC1.17□□□□□ -2.22
PCDHGC3Q9UN70 RNU1-29P-201ENST00000606574 126 ntBASIC1.17□□□□□ -2.22
PCDHGC3Q9UN70 MIR6078-201ENST00000611069 100 ntBASIC1.17□□□□□ -2.22
PCDHGC3Q9UN70 Y_RNA.246-201ENST00000364495 108 ntBASIC1.16□□□□□ -2.22
PCDHGC3Q9UN70 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
PCDHGC3Q9UN70 SNORA25.18-201ENST00000607153 114 ntBASIC1.16□□□□□ -2.22
PCDHGC3Q9UN70 U4.4-201ENST00000620626 117 ntBASIC1.16□□□□□ -2.22
PCDHGC3Q9UN70 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
PCDHGC3Q9UN70 RNY1P8-201ENST00000383970 114 ntBASIC1.15□□□□□ -2.23
PCDHGC3Q9UN70 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.15□□□□□ -2.23
PCDHGC3Q9UN70 Y_RNA.327-201ENST00000365201 102 ntBASIC1.14□□□□□ -2.23
PCDHGC3Q9UN70 RNU6-321P-201ENST00000410912 106 ntBASIC1.14□□□□□ -2.23
PCDHGC3Q9UN70 ACA64.5-201ENST00000516207 127 ntBASIC1.14□□□□□ -2.23
PCDHGC3Q9UN70 AL590095.2-201ENST00000604136 117 ntBASIC1.14□□□□□ -2.23
PCDHGC3Q9UN70 RNU6-392P-201ENST00000364926 101 ntBASIC1.13□□□□□ -2.23
PCDHGC3Q9UN70 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
PCDHGC3Q9UN70 MIR518A1-201ENST00000385068 85 ntBASIC1.12□□□□□ -2.23
PCDHGC3Q9UN70 RNU6-520P-201ENST00000384717 104 ntBASIC1.11□□□□□ -2.23
PCDHGC3Q9UN70 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
PCDHGC3Q9UN70 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
PCDHGC3Q9UN70 SNORD114-21-201ENST00000606412 72 ntBASIC1.11□□□□□ -2.23
PCDHGC3Q9UN70 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
PCDHGC3Q9UN70 TRMT112P2-201ENST00000512910 132 ntBASIC1.1□□□□□ -2.23
PCDHGC3Q9UN70 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.09□□□□□ -2.23
PCDHGC3Q9UN70 RNU6-446P-201ENST00000362827 106 ntBASIC1.09□□□□□ -2.23
PCDHGC3Q9UN70 Y_RNA.423-201ENST00000384057 113 ntBASIC1.09□□□□□ -2.23
PCDHGC3Q9UN70 RNU6-518P-201ENST00000516056 96 ntBASIC1.09□□□□□ -2.23
PCDHGC3Q9UN70 AC243829.3-201ENST00000622177 108 ntBASIC1.09□□□□□ -2.23
PCDHGC3Q9UN70 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
PCDHGC3Q9UN70 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
PCDHGC3Q9UN70 RNU6-863P-201ENST00000515989 104 ntBASIC1.08□□□□□ -2.24
PCDHGC3Q9UN70 Y_RNA.676-201ENST00000516393 96 ntBASIC1.08□□□□□ -2.24
PCDHGC3Q9UN70 AC211469.2-201ENST00000605461 205 ntBASIC1.08□□□□□ -2.24
PCDHGC3Q9UN70 Y_RNA.74-201ENST00000362911 99 ntBASIC1.07□□□□□ -2.24
PCDHGC3Q9UN70 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
PCDHGC3Q9UN70 Y_RNA.325-201ENST00000365171 122 ntBASIC1.06□□□□□ -2.24
PCDHGC3Q9UN70 MIR1255B2-201ENST00000408618 67 ntBASIC1.06□□□□□ -2.24
PCDHGC3Q9UN70 RNU7-119P-201ENST00000459279 63 ntBASIC1.06□□□□□ -2.24
PCDHGC3Q9UN70 RNA5SP470-201ENST00000516463 106 ntBASIC1.06□□□□□ -2.24
PCDHGC3Q9UN70 RNU7-188P-201ENST00000517063 64 ntBASIC1.06□□□□□ -2.24
PCDHGC3Q9UN70 RNU6-808P-201ENST00000391233 108 ntBASIC1.05□□□□□ -2.24
PCDHGC3Q9UN70 Y_RNA.722-201ENST00000517279 114 ntBASIC1.05□□□□□ -2.24
PCDHGC3Q9UN70 MIR4677-201ENST00000584153 80 ntBASIC1.05□□□□□ -2.24
PCDHGC3Q9UN70 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
PCDHGC3Q9UN70 AC084368.1-201ENST00000620935 65 ntBASIC1.05□□□□□ -2.24
PCDHGC3Q9UN70 Y_RNA.164-201ENST00000363709 102 ntBASIC1.04□□□□□ -2.24
PCDHGC3Q9UN70 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.04□□□□□ -2.24
PCDHGC3Q9UN70 AC098934.3-201ENST00000430450 190 ntBASIC1.04□□□□□ -2.24
PCDHGC3Q9UN70 SNORA9.1-201ENST00000362412 131 ntBASIC1.03□□□□□ -2.24
PCDHGC3Q9UN70 MIR548AD-201ENST00000584780 82 ntBASIC1.02□□□□□ -2.25
PCDHGC3Q9UN70 MIR6773-201ENST00000612812 74 ntBASIC1.02□□□□□ -2.25
PCDHGC3Q9UN70 MIR519A2-201ENST00000384990 87 ntBASIC1.01□□□□□ -2.25
PCDHGC3Q9UN70 MIR760-201ENST00000390220 80 ntBASIC1.01□□□□□ -2.25
PCDHGC3Q9UN70 PSMC1P5-201ENST00000512850 177 ntBASIC1.01□□□□□ -2.25
PCDHGC3Q9UN70 RNU7-154P-201ENST00000516194 62 ntBASIC1.01□□□□□ -2.25
PCDHGC3Q9UN70 AC090617.8-201ENST00000623339 167 ntBASIC1.01□□□□□ -2.25
PCDHGC3Q9UN70 SNORA41B-201ENST00000384785 128 ntBASIC1□□□□□ -2.25
PCDHGC3Q9UN70 MIR501-201ENST00000390204 84 ntBASIC1□□□□□ -2.25
PCDHGC3Q9UN70 SNORD116-16-201ENST00000384533 92 ntBASIC0.99□□□□□ -2.25
PCDHGC3Q9UN70 MIR527-201ENST00000385244 85 ntBASIC0.99□□□□□ -2.25
PCDHGC3Q9UN70 RNU4-54P-201ENST00000516428 129 ntBASIC0.99□□□□□ -2.25
PCDHGC3Q9UN70 MIR6755-201ENST00000619993 66 ntBASIC0.99□□□□□ -2.25
PCDHGC3Q9UN70 RNA5SP128-201ENST00000365305 116 ntBASIC0.98□□□□□ -2.25
PCDHGC3Q9UN70 MIR532-201ENST00000385025 91 ntBASIC0.98□□□□□ -2.25
PCDHGC3Q9UN70 RNU6-1232P-201ENST00000516299 86 ntBASIC0.98□□□□□ -2.25
PCDHGC3Q9UN70 RNU6-175P-201ENST00000516896 107 ntBASIC0.98□□□□□ -2.25
PCDHGC3Q9UN70 MIR8070-201ENST00000616510 88 ntBASIC0.98□□□□□ -2.25
PCDHGC3Q9UN70 MIR429-201ENST00000362106 83 ntBASIC0.97□□□□□ -2.25
PCDHGC3Q9UN70 RNU6-337P-201ENST00000391243 106 ntBASIC0.97□□□□□ -2.25
PCDHGC3Q9UN70 SNORD115-25-201ENST00000362619 82 ntBASIC0.96□□□□□ -2.26
PCDHGC3Q9UN70 RNU6-1246P-201ENST00000391064 107 ntBASIC0.96□□□□□ -2.26
PCDHGC3Q9UN70 MIR499A-201ENST00000384903 122 ntBASIC0.95□□□□□ -2.26
PCDHGC3Q9UN70 SNORA49-201ENST00000386157 136 ntBASIC0.95□□□□□ -2.26
PCDHGC3Q9UN70 MIR1276-201ENST00000408707 83 ntBASIC0.95□□□□□ -2.26
PCDHGC3Q9UN70 RNA5SP247-201ENST00000411181 105 ntBASIC0.95□□□□□ -2.26
PCDHGC3Q9UN70 MIR6857-201ENST00000613267 93 ntBASIC0.95□□□□□ -2.26
PCDHGC3Q9UN70 Y_RNA.226-201ENST00000364337 114 ntBASIC0.94□□□□□ -2.26
PCDHGC3Q9UN70 Y_RNA.282-201ENST00000364793 102 ntBASIC0.94□□□□□ -2.26
PCDHGC3Q9UN70 RNU6-1036P-201ENST00000383959 104 ntBASIC0.94□□□□□ -2.26
PCDHGC3Q9UN70 MIR7978-201ENST00000636158 59 ntBASIC0.94□□□□□ -2.26
PCDHGC3Q9UN70 MIR6767-201ENST00000637302 66 ntBASIC0.94□□□□□ -2.26
PCDHGC3Q9UN70 SNORD113-4-201ENST00000364802 75 ntBASIC0.93□□□□□ -2.26
PCDHGC3Q9UN70 MIRLET7B-201ENST00000385140 83 ntBASIC0.93□□□□□ -2.26
PCDHGC3Q9UN70 MIR876-201ENST00000401147 81 ntBASIC0.93□□□□□ -2.26
PCDHGC3Q9UN70 RNU6-231P-201ENST00000517122 103 ntBASIC0.93□□□□□ -2.26
PCDHGC3Q9UN70 RNU6-936P-201ENST00000384005 107 ntBASIC0.92□□□□□ -2.26
PCDHGC3Q9UN70 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
PCDHGC3Q9UN70 RNA5SP102-201ENST00000516865 106 ntBASIC0.92□□□□□ -2.26
PCDHGC3Q9UN70 MIR4653-201ENST00000585107 83 ntBASIC0.92□□□□□ -2.26
PCDHGC3Q9UN70 MIR6504-201ENST00000613520 61 ntBASIC0.92□□□□□ -2.26
PCDHGC3Q9UN70 MIR96-201ENST00000362288 78 ntBASIC0.91□□□□□ -2.26
PCDHGC3Q9UN70 RNU6-502P-201ENST00000362419 108 ntBASIC0.91□□□□□ -2.26
PCDHGC3Q9UN70 MIR1287-201ENST00000408492 90 ntBASIC0.91□□□□□ -2.26
PCDHGC3Q9UN70 MIR373-201ENST00000362273 69 ntBASIC0.9□□□□□ -2.27
PCDHGC3Q9UN70 SNORD114-27-201ENST00000363766 70 ntBASIC0.9□□□□□ -2.27
PCDHGC3Q9UN70 RNU6-246P-201ENST00000384702 107 ntBASIC0.9□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 237.7 ms