Protein–RNA interactions for Protein: Q9UKX7

NUP50, Nuclear pore complex protein Nup50, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50Q9UKX7 MIR4464-201ENST00000580818 92 ntBASIC-1.33□□□□□ -2.62
NUP50Q9UKX7 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.34□□□□□ -2.62
NUP50Q9UKX7 MIR5009-201ENST00000578736 100 ntBASIC-1.34□□□□□ -2.62
NUP50Q9UKX7 AL353803.5-201ENST00000599815 141 ntBASIC-1.34□□□□□ -2.62
NUP50Q9UKX7 SNORD114-17-201ENST00000364699 75 ntBASIC-1.35□□□□□ -2.63
NUP50Q9UKX7 RNU6-382P-201ENST00000365181 106 ntBASIC-1.35□□□□□ -2.63
NUP50Q9UKX7 snoU13.17-201ENST00000458802 104 ntBASIC-1.35□□□□□ -2.63
NUP50Q9UKX7 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.35□□□□□ -2.63
NUP50Q9UKX7 SNORA18.5-201ENST00000516616 101 ntBASIC-1.35□□□□□ -2.63
NUP50Q9UKX7 MIR4777-201ENST00000583710 86 ntBASIC-1.35□□□□□ -2.63
NUP50Q9UKX7 AC006254.2-201ENST00000603259 279 ntBASIC-1.35□□□□□ -2.63
NUP50Q9UKX7 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.36□□□□□ -2.63
NUP50Q9UKX7 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.36□□□□□ -2.63
NUP50Q9UKX7 MT-TG-201ENST00000387429 68 ntBASIC-1.36□□□□□ -2.63
NUP50Q9UKX7 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.36□□□□□ -2.63
NUP50Q9UKX7 AC138207.3-201ENST00000585289 166 ntBASIC-1.36□□□□□ -2.63
NUP50Q9UKX7 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.37□□□□□ -2.63
NUP50Q9UKX7 RNU7-107P-201ENST00000459121 61 ntBASIC-1.37□□□□□ -2.63
NUP50Q9UKX7 AL353621.2-201ENST00000605340 133 ntBASIC-1.37□□□□□ -2.63
NUP50Q9UKX7 MIR1246-201ENST00000636535 73 ntBASIC-1.37□□□□□ -2.63
NUP50Q9UKX7 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.38□□□□□ -2.63
NUP50Q9UKX7 RNU6-260P-201ENST00000384092 107 ntBASIC-1.38□□□□□ -2.63
NUP50Q9UKX7 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.38□□□□□ -2.63
NUP50Q9UKX7 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.38□□□□□ -2.63
NUP50Q9UKX7 MTATP6P29-201ENST00000415057 132 ntBASIC-1.38□□□□□ -2.63
NUP50Q9UKX7 MIR6888-201ENST00000621977 67 ntBASIC-1.38□□□□□ -2.63
NUP50Q9UKX7 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.39□□□□□ -2.63
NUP50Q9UKX7 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.39□□□□□ -2.63
NUP50Q9UKX7 SNORA40-201ENST00000388090 126 ntBASIC-1.39□□□□□ -2.63
NUP50Q9UKX7 MIR548I1-201ENST00000408810 149 ntBASIC-1.39□□□□□ -2.63
NUP50Q9UKX7 RNU6-795P-201ENST00000516323 103 ntBASIC-1.39□□□□□ -2.63
NUP50Q9UKX7 AL445584.3-201ENST00000617173 78 ntBASIC-1.39□□□□□ -2.63
NUP50Q9UKX7 RNU6-824P-201ENST00000363724 104 ntBASIC-1.4□□□□□ -2.63
NUP50Q9UKX7 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.4□□□□□ -2.63
NUP50Q9UKX7 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.4□□□□□ -2.63
NUP50Q9UKX7 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.4□□□□□ -2.63
NUP50Q9UKX7 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.4□□□□□ -2.63
NUP50Q9UKX7 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.4□□□□□ -2.63
NUP50Q9UKX7 RNA5SP147-201ENST00000516493 109 ntBASIC-1.4□□□□□ -2.63
NUP50Q9UKX7 AC012531.4-201ENST00000616509 177 ntBASIC-1.4□□□□□ -2.63
NUP50Q9UKX7 MIR4773-1-201ENST00000637203 78 ntBASIC-1.4□□□□□ -2.63
NUP50Q9UKX7 SNORA33.1-201ENST00000364957 130 ntBASIC-1.41□□□□□ -2.64
NUP50Q9UKX7 RNU6-886P-201ENST00000384319 105 ntBASIC-1.41□□□□□ -2.64
NUP50Q9UKX7 RNU6-257P-201ENST00000410238 98 ntBASIC-1.41□□□□□ -2.64
NUP50Q9UKX7 RNU6-182P-201ENST00000516970 105 ntBASIC-1.41□□□□□ -2.64
NUP50Q9UKX7 snoU83B.1-201ENST00000517136 88 ntBASIC-1.41□□□□□ -2.64
NUP50Q9UKX7 MIR3914-2-201ENST00000637339 95 ntBASIC-1.41□□□□□ -2.64
NUP50Q9UKX7 RNU5F-1-201ENST00000362507 117 ntBASIC-1.42□□□□□ -2.64
NUP50Q9UKX7 RNY4P27-201ENST00000363341 96 ntBASIC-1.42□□□□□ -2.64
NUP50Q9UKX7 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.42□□□□□ -2.64
NUP50Q9UKX7 MIR203A-201ENST00000384836 110 ntBASIC-1.42□□□□□ -2.64
NUP50Q9UKX7 SNORD33.1-201ENST00000516213 88 ntBASIC-1.42□□□□□ -2.64
NUP50Q9UKX7 MIR6509-201ENST00000614603 85 ntBASIC-1.42□□□□□ -2.64
NUP50Q9UKX7 SNORA2.1-201ENST00000363089 137 ntBASIC-1.43□□□□□ -2.64
NUP50Q9UKX7 MIR1255B2-201ENST00000408618 67 ntBASIC-1.43□□□□□ -2.64
NUP50Q9UKX7 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.43□□□□□ -2.64
NUP50Q9UKX7 MIR3657-201ENST00000584818 117 ntBASIC-1.43□□□□□ -2.64
NUP50Q9UKX7 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.44□□□□□ -2.64
NUP50Q9UKX7 HLA-S-202ENST00000425174 53 ntBASIC-1.44□□□□□ -2.64
NUP50Q9UKX7 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.44□□□□□ -2.64
NUP50Q9UKX7 RNU7-200P-201ENST00000516105 62 ntBASIC-1.45□□□□□ -2.64
NUP50Q9UKX7 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.46□□□□□ -2.64
NUP50Q9UKX7 RNU6-479P-201ENST00000516348 105 ntBASIC-1.46□□□□□ -2.64
NUP50Q9UKX7 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.46□□□□□ -2.64
NUP50Q9UKX7 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.47□□□□□ -2.64
NUP50Q9UKX7 SNORD58A-201ENST00000383875 65 ntBASIC-1.47□□□□□ -2.64
NUP50Q9UKX7 RNU6-971P-201ENST00000516920 106 ntBASIC-1.47□□□□□ -2.64
NUP50Q9UKX7 CYP3A54P-201ENST00000566950 75 ntBASIC-1.47□□□□□ -2.64
NUP50Q9UKX7 U6.81-201ENST00000612550 106 ntBASIC-1.47□□□□□ -2.64
NUP50Q9UKX7 AC132825.6-201ENST00000638861 357 ntBASIC-1.47□□□□□ -2.64
NUP50Q9UKX7 RNU6-226P-201ENST00000363778 107 ntBASIC-1.48□□□□□ -2.65
NUP50Q9UKX7 MIR548A3-201ENST00000385297 97 ntBASIC-1.48□□□□□ -2.65
NUP50Q9UKX7 RNU6-972P-201ENST00000391208 107 ntBASIC-1.48□□□□□ -2.65
NUP50Q9UKX7 AL691482.2-201ENST00000457453 84 ntBASIC-1.48□□□□□ -2.65
NUP50Q9UKX7 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.49□□□□□ -2.65
NUP50Q9UKX7 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.49□□□□□ -2.65
NUP50Q9UKX7 RNU6-887P-201ENST00000410660 100 ntBASIC-1.49□□□□□ -2.65
NUP50Q9UKX7 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.49□□□□□ -2.65
NUP50Q9UKX7 U6.95-201ENST00000636931 70 ntBASIC-1.49□□□□□ -2.65
NUP50Q9UKX7 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.5□□□□□ -2.65
NUP50Q9UKX7 SNORA19.1-201ENST00000410656 129 ntBASIC-1.5□□□□□ -2.65
NUP50Q9UKX7 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.5□□□□□ -2.65
NUP50Q9UKX7 RNU7-134P-201ENST00000458997 64 ntBASIC-1.5□□□□□ -2.65
NUP50Q9UKX7 SCARNA23-201ENST00000516060 130 ntBASIC-1.5□□□□□ -2.65
NUP50Q9UKX7 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.5□□□□□ -2.65
NUP50Q9UKX7 RNU6-924P-201ENST00000362926 108 ntBASIC-1.51□□□□□ -2.65
NUP50Q9UKX7 RNU6-80P-201ENST00000384195 107 ntBASIC-1.51□□□□□ -2.65
NUP50Q9UKX7 RNU6-904P-201ENST00000516206 101 ntBASIC-1.51□□□□□ -2.65
NUP50Q9UKX7 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.51□□□□□ -2.65
NUP50Q9UKX7 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.51□□□□□ -2.65
NUP50Q9UKX7 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.51□□□□□ -2.65
NUP50Q9UKX7 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.52□□□□□ -2.65
NUP50Q9UKX7 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.52□□□□□ -2.65
NUP50Q9UKX7 MIR5591-201ENST00000578248 65 ntBASIC-1.52□□□□□ -2.65
NUP50Q9UKX7 MIR4770-201ENST00000579149 58 ntBASIC-1.52□□□□□ -2.65
NUP50Q9UKX7 MIR4796-201ENST00000580742 81 ntBASIC-1.52□□□□□ -2.65
NUP50Q9UKX7 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.53□□□□□ -2.65
NUP50Q9UKX7 MIR521-2-201ENST00000384818 87 ntBASIC-1.53□□□□□ -2.65
NUP50Q9UKX7 MIR29B1-201ENST00000385015 81 ntBASIC-1.53□□□□□ -2.65
NUP50Q9UKX7 RNU7-154P-201ENST00000516194 62 ntBASIC-1.53□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms