Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 RNA5SP192-201ENST00000364404 120 ntBASIC-1.12□□□□□ -2.59
BLOC1S4Q9NUP1 SNORA24B-201ENST00000384176 131 ntBASIC-1.12□□□□□ -2.59
BLOC1S4Q9NUP1 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.12□□□□□ -2.59
BLOC1S4Q9NUP1 MIR548I1-201ENST00000408810 149 ntBASIC-1.12□□□□□ -2.59
BLOC1S4Q9NUP1 HAR1A.1-201ENST00000459583 118 ntBASIC-1.12□□□□□ -2.59
BLOC1S4Q9NUP1 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.12□□□□□ -2.59
BLOC1S4Q9NUP1 AC006254.2-201ENST00000603259 279 ntBASIC-1.12□□□□□ -2.59
BLOC1S4Q9NUP1 SNORD58A-201ENST00000383875 65 ntBASIC-1.13□□□□□ -2.59
BLOC1S4Q9NUP1 RNU6-905P-201ENST00000384434 107 ntBASIC-1.13□□□□□ -2.59
BLOC1S4Q9NUP1 MIR1302-5-201ENST00000408164 150 ntBASIC-1.13□□□□□ -2.59
BLOC1S4Q9NUP1 RNU7-134P-201ENST00000458997 64 ntBASIC-1.13□□□□□ -2.59
BLOC1S4Q9NUP1 snoU13.19-201ENST00000459148 104 ntBASIC-1.13□□□□□ -2.59
BLOC1S4Q9NUP1 MIR3133-201ENST00000583157 78 ntBASIC-1.13□□□□□ -2.59
BLOC1S4Q9NUP1 RNU5F-1-201ENST00000362507 117 ntBASIC-1.14□□□□□ -2.59
BLOC1S4Q9NUP1 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.14□□□□□ -2.59
BLOC1S4Q9NUP1 RNU6-30P-201ENST00000384561 107 ntBASIC-1.14□□□□□ -2.59
BLOC1S4Q9NUP1 RNU6-476P-201ENST00000384726 107 ntBASIC-1.14□□□□□ -2.59
BLOC1S4Q9NUP1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.14□□□□□ -2.59
BLOC1S4Q9NUP1 SNORD116-10-201ENST00000363791 102 ntBASIC-1.15□□□□□ -2.59
BLOC1S4Q9NUP1 RNU6-746P-201ENST00000384112 109 ntBASIC-1.15□□□□□ -2.59
BLOC1S4Q9NUP1 MIR587-201ENST00000384845 96 ntBASIC-1.15□□□□□ -2.59
BLOC1S4Q9NUP1 SNORA18.5-201ENST00000516616 101 ntBASIC-1.15□□□□□ -2.59
BLOC1S4Q9NUP1 RNY1P9-201ENST00000532431 109 ntBASIC-1.15□□□□□ -2.59
BLOC1S4Q9NUP1 MIR6773-201ENST00000612812 74 ntBASIC-1.15□□□□□ -2.59
BLOC1S4Q9NUP1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.15□□□□□ -2.59
BLOC1S4Q9NUP1 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.16□□□□□ -2.6
BLOC1S4Q9NUP1 MIR8485-201ENST00000401372 91 ntBASIC-1.16□□□□□ -2.6
BLOC1S4Q9NUP1 AC008267.6-201ENST00000441664 139 ntBASIC-1.16□□□□□ -2.6
BLOC1S4Q9NUP1 AC097510.1-201ENST00000510945 133 ntBASIC-1.16□□□□□ -2.6
BLOC1S4Q9NUP1 AC026421.1-201ENST00000519101 163 ntBASIC-1.17□□□□□ -2.6
BLOC1S4Q9NUP1 RNA5SP292-201ENST00000390974 118 ntBASIC-1.18□□□□□ -2.6
BLOC1S4Q9NUP1 AC021146.9-201ENST00000512503 156 ntBASIC-1.18□□□□□ -2.6
BLOC1S4Q9NUP1 MIR6854-201ENST00000614935 69 ntBASIC-1.18□□□□□ -2.6
BLOC1S4Q9NUP1 SNORD74.6-201ENST00000364796 70 ntBASIC-1.19□□□□□ -2.6
BLOC1S4Q9NUP1 MIR3165-201ENST00000579874 75 ntBASIC-1.19□□□□□ -2.6
BLOC1S4Q9NUP1 RNU4-32P-201ENST00000363404 141 ntBASIC-1.2□□□□□ -2.6
BLOC1S4Q9NUP1 RNU6-959P-201ENST00000384671 107 ntBASIC-1.21□□□□□ -2.6
BLOC1S4Q9NUP1 MIRLET7B-201ENST00000385140 83 ntBASIC-1.21□□□□□ -2.6
BLOC1S4Q9NUP1 RNA5SP461-201ENST00000516451 104 ntBASIC-1.21□□□□□ -2.6
BLOC1S4Q9NUP1 RNU6-706P-201ENST00000517229 104 ntBASIC-1.21□□□□□ -2.6
BLOC1S4Q9NUP1 RNA5SP67-201ENST00000516422 131 ntBASIC-1.22□□□□□ -2.6
BLOC1S4Q9NUP1 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.23□□□□□ -2.61
BLOC1S4Q9NUP1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
BLOC1S4Q9NUP1 SNORA19.1-201ENST00000410656 129 ntBASIC-1.23□□□□□ -2.61
BLOC1S4Q9NUP1 RNU6-479P-201ENST00000516348 105 ntBASIC-1.23□□□□□ -2.61
BLOC1S4Q9NUP1 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.24□□□□□ -2.61
BLOC1S4Q9NUP1 U6.96-201ENST00000636425 70 ntBASIC-1.24□□□□□ -2.61
BLOC1S4Q9NUP1 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.25□□□□□ -2.61
BLOC1S4Q9NUP1 RNU6-226P-201ENST00000363778 107 ntBASIC-1.25□□□□□ -2.61
BLOC1S4Q9NUP1 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.25□□□□□ -2.61
BLOC1S4Q9NUP1 SNORD114-17-201ENST00000364699 75 ntBASIC-1.25□□□□□ -2.61
BLOC1S4Q9NUP1 SNORD57-201ENST00000448188 72 ntBASIC-1.25□□□□□ -2.61
BLOC1S4Q9NUP1 snoU83B.1-201ENST00000517136 88 ntBASIC-1.25□□□□□ -2.61
BLOC1S4Q9NUP1 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.25□□□□□ -2.61
BLOC1S4Q9NUP1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.25□□□□□ -2.61
BLOC1S4Q9NUP1 RNU6-990P-201ENST00000364385 104 ntBASIC-1.26□□□□□ -2.61
BLOC1S4Q9NUP1 SNORA62.4-201ENST00000365504 151 ntBASIC-1.26□□□□□ -2.61
BLOC1S4Q9NUP1 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.26□□□□□ -2.61
BLOC1S4Q9NUP1 RNU6-592P-201ENST00000411333 103 ntBASIC-1.26□□□□□ -2.61
BLOC1S4Q9NUP1 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.27□□□□□ -2.61
BLOC1S4Q9NUP1 RNU6-774P-201ENST00000363238 107 ntBASIC-1.27□□□□□ -2.61
BLOC1S4Q9NUP1 RNU6-382P-201ENST00000365181 106 ntBASIC-1.27□□□□□ -2.61
BLOC1S4Q9NUP1 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.27□□□□□ -2.61
BLOC1S4Q9NUP1 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.27□□□□□ -2.61
BLOC1S4Q9NUP1 MIR889-201ENST00000401280 79 ntBASIC-1.27□□□□□ -2.61
BLOC1S4Q9NUP1 MIR1236-201ENST00000408340 102 ntBASIC-1.27□□□□□ -2.61
BLOC1S4Q9NUP1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.27□□□□□ -2.61
BLOC1S4Q9NUP1 SNORD115-23-201ENST00000364461 82 ntBASIC-1.28□□□□□ -2.61
BLOC1S4Q9NUP1 RNU6-260P-201ENST00000384092 107 ntBASIC-1.28□□□□□ -2.61
BLOC1S4Q9NUP1 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.28□□□□□ -2.61
BLOC1S4Q9NUP1 RNU6-337P-201ENST00000391243 106 ntBASIC-1.28□□□□□ -2.61
BLOC1S4Q9NUP1 HLA-S-202ENST00000425174 53 ntBASIC-1.28□□□□□ -2.61
BLOC1S4Q9NUP1 RNU6-537P-201ENST00000517277 103 ntBASIC-1.28□□□□□ -2.61
BLOC1S4Q9NUP1 MIR6129-201ENST00000616087 109 ntBASIC-1.28□□□□□ -2.61
BLOC1S4Q9NUP1 MIR4773-1-201ENST00000637203 78 ntBASIC-1.28□□□□□ -2.61
BLOC1S4Q9NUP1 AC132825.6-201ENST00000638861 357 ntBASIC-1.28□□□□□ -2.61
BLOC1S4Q9NUP1 MIR590-201ENST00000385008 97 ntBASIC-1.29□□□□□ -2.62
BLOC1S4Q9NUP1 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.29□□□□□ -2.62
BLOC1S4Q9NUP1 RNU2-51P-201ENST00000410708 197 ntBASIC-1.29□□□□□ -2.62
BLOC1S4Q9NUP1 YWHAEP3-201ENST00000582767 121 ntBASIC-1.29□□□□□ -2.62
BLOC1S4Q9NUP1 AC138207.3-201ENST00000585289 166 ntBASIC-1.29□□□□□ -2.62
BLOC1S4Q9NUP1 MIR4320-201ENST00000636981 65 ntBASIC-1.29□□□□□ -2.62
BLOC1S4Q9NUP1 RNU6-834P-201ENST00000362367 110 ntBASIC-1.3□□□□□ -2.62
BLOC1S4Q9NUP1 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.3□□□□□ -2.62
BLOC1S4Q9NUP1 SNORD18.2-201ENST00000459604 70 ntBASIC-1.3□□□□□ -2.62
BLOC1S4Q9NUP1 RNU7-61P-201ENST00000515897 61 ntBASIC-1.3□□□□□ -2.62
BLOC1S4Q9NUP1 MIR5591-201ENST00000578248 65 ntBASIC-1.3□□□□□ -2.62
BLOC1S4Q9NUP1 MIR4796-201ENST00000580742 81 ntBASIC-1.3□□□□□ -2.62
BLOC1S4Q9NUP1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.3□□□□□ -2.62
BLOC1S4Q9NUP1 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.31□□□□□ -2.62
BLOC1S4Q9NUP1 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.31□□□□□ -2.62
BLOC1S4Q9NUP1 RNU6-81P-201ENST00000365608 104 ntBASIC-1.31□□□□□ -2.62
BLOC1S4Q9NUP1 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.31□□□□□ -2.62
BLOC1S4Q9NUP1 SNORD90-201ENST00000391145 111 ntBASIC-1.31□□□□□ -2.62
BLOC1S4Q9NUP1 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.31□□□□□ -2.62
BLOC1S4Q9NUP1 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.32□□□□□ -2.62
BLOC1S4Q9NUP1 MIR6509-201ENST00000614603 85 ntBASIC-1.32□□□□□ -2.62
BLOC1S4Q9NUP1 SNORA2.1-201ENST00000363089 137 ntBASIC-1.33□□□□□ -2.62
BLOC1S4Q9NUP1 AL691482.2-201ENST00000457453 84 ntBASIC-1.33□□□□□ -2.62
BLOC1S4Q9NUP1 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.33□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms