Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 MALAT1.1-201ENST00000618249 95 ntBASIC-0.35□□□□□ -2.47
SLC6A13Q9NSD5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.36□□□□□ -2.47
SLC6A13Q9NSD5 MIR101-1-201ENST00000362265 75 ntBASIC-0.36□□□□□ -2.47
SLC6A13Q9NSD5 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.36□□□□□ -2.47
SLC6A13Q9NSD5 MIR519C-201ENST00000385053 87 ntBASIC-0.36□□□□□ -2.47
SLC6A13Q9NSD5 RNU6-758P-201ENST00000516292 89 ntBASIC-0.36□□□□□ -2.47
SLC6A13Q9NSD5 MIR4668-201ENST00000582284 70 ntBASIC-0.36□□□□□ -2.47
SLC6A13Q9NSD5 AL590491.3-201ENST00000610731 82 ntBASIC-0.36□□□□□ -2.47
SLC6A13Q9NSD5 SNORA63.6-201ENST00000364921 119 ntBASIC-0.37□□□□□ -2.47
SLC6A13Q9NSD5 RNU6-900P-201ENST00000384498 102 ntBASIC-0.37□□□□□ -2.47
SLC6A13Q9NSD5 RNU6-320P-201ENST00000516511 106 ntBASIC-0.37□□□□□ -2.47
SLC6A13Q9NSD5 RNU6-640P-201ENST00000363693 105 ntBASIC-0.38□□□□□ -2.47
SLC6A13Q9NSD5 MIR604-201ENST00000384880 94 ntBASIC-0.38□□□□□ -2.47
SLC6A13Q9NSD5 RNU6-633P-201ENST00000362612 103 ntBASIC-0.39□□□□□ -2.47
SLC6A13Q9NSD5 SNORD114-11-201ENST00000363738 75 ntBASIC-0.39□□□□□ -2.47
SLC6A13Q9NSD5 MIR488-201ENST00000365739 83 ntBASIC-0.39□□□□□ -2.47
SLC6A13Q9NSD5 RNU6-905P-201ENST00000384434 107 ntBASIC-0.39□□□□□ -2.47
SLC6A13Q9NSD5 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
SLC6A13Q9NSD5 RNA5SP25-201ENST00000410815 110 ntBASIC-0.39□□□□□ -2.47
SLC6A13Q9NSD5 snoU13.13-201ENST00000458842 104 ntBASIC-0.39□□□□□ -2.47
SLC6A13Q9NSD5 AC021146.9-201ENST00000512503 156 ntBASIC-0.39□□□□□ -2.47
SLC6A13Q9NSD5 RNU6-502P-201ENST00000362419 108 ntBASIC-0.4□□□□□ -2.47
SLC6A13Q9NSD5 SNORD116-22-201ENST00000384430 92 ntBASIC-0.4□□□□□ -2.47
SLC6A13Q9NSD5 RNU6-901P-201ENST00000384593 106 ntBASIC-0.4□□□□□ -2.47
SLC6A13Q9NSD5 MIR203A-201ENST00000384836 110 ntBASIC-0.4□□□□□ -2.47
SLC6A13Q9NSD5 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
SLC6A13Q9NSD5 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.4□□□□□ -2.47
SLC6A13Q9NSD5 AL445193.1-201ENST00000441183 141 ntBASIC-0.4□□□□□ -2.47
SLC6A13Q9NSD5 RNU7-55P-201ENST00000459426 62 ntBASIC-0.4□□□□□ -2.47
SLC6A13Q9NSD5 RNA5SP66-201ENST00000517178 101 ntBASIC-0.4□□□□□ -2.47
SLC6A13Q9NSD5 SNORA40.17-201ENST00000517256 115 ntBASIC-0.4□□□□□ -2.47
SLC6A13Q9NSD5 U6.81-201ENST00000612550 106 ntBASIC-0.4□□□□□ -2.47
SLC6A13Q9NSD5 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.4□□□□□ -2.47
SLC6A13Q9NSD5 MIR6509-201ENST00000614603 85 ntBASIC-0.4□□□□□ -2.47
SLC6A13Q9NSD5 uc_338.36-201ENST00000622331 158 ntBASIC-0.4□□□□□ -2.47
SLC6A13Q9NSD5 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.41□□□□□ -2.48
SLC6A13Q9NSD5 SNORD56B-201ENST00000384713 71 ntBASIC-0.41□□□□□ -2.48
SLC6A13Q9NSD5 AL450471.1-201ENST00000447509 127 ntBASIC-0.41□□□□□ -2.48
SLC6A13Q9NSD5 RNU6-274P-201ENST00000459566 107 ntBASIC-0.41□□□□□ -2.48
SLC6A13Q9NSD5 MIR6773-201ENST00000612812 74 ntBASIC-0.41□□□□□ -2.48
SLC6A13Q9NSD5 SNORD115-37-201ENST00000363768 82 ntBASIC-0.42□□□□□ -2.48
SLC6A13Q9NSD5 RNA5SP368-201ENST00000364298 116 ntBASIC-0.42□□□□□ -2.48
SLC6A13Q9NSD5 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.42□□□□□ -2.48
SLC6A13Q9NSD5 RNU6-260P-201ENST00000384092 107 ntBASIC-0.42□□□□□ -2.48
SLC6A13Q9NSD5 RNY1P7-201ENST00000384743 110 ntBASIC-0.42□□□□□ -2.48
SLC6A13Q9NSD5 RNU6-402P-201ENST00000410678 103 ntBASIC-0.42□□□□□ -2.48
SLC6A13Q9NSD5 AC096531.1-201ENST00000419107 107 ntBASIC-0.42□□□□□ -2.48
SLC6A13Q9NSD5 AL691482.2-201ENST00000457453 84 ntBASIC-0.42□□□□□ -2.48
SLC6A13Q9NSD5 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.42□□□□□ -2.48
SLC6A13Q9NSD5 RNA5SP147-201ENST00000516493 109 ntBASIC-0.42□□□□□ -2.48
SLC6A13Q9NSD5 AC108676.2-201ENST00000605225 163 ntBASIC-0.42□□□□□ -2.48
SLC6A13Q9NSD5 RNU6-208P-201ENST00000362431 107 ntBASIC-0.43□□□□□ -2.48
SLC6A13Q9NSD5 RNA5SP275-201ENST00000363936 118 ntBASIC-0.43□□□□□ -2.48
SLC6A13Q9NSD5 RNU6-219P-201ENST00000364728 107 ntBASIC-0.43□□□□□ -2.48
SLC6A13Q9NSD5 RNU6-267P-201ENST00000516714 103 ntBASIC-0.43□□□□□ -2.48
SLC6A13Q9NSD5 RNU6-337P-201ENST00000391243 106 ntBASIC-0.44□□□□□ -2.48
SLC6A13Q9NSD5 MIR3657-201ENST00000584818 117 ntBASIC-0.44□□□□□ -2.48
SLC6A13Q9NSD5 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.44□□□□□ -2.48
SLC6A13Q9NSD5 SNORD95.1-201ENST00000364099 68 ntBASIC-0.45□□□□□ -2.48
SLC6A13Q9NSD5 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.45□□□□□ -2.48
SLC6A13Q9NSD5 RNU6-973P-201ENST00000364690 107 ntBASIC-0.45□□□□□ -2.48
SLC6A13Q9NSD5 SNORD77.2-201ENST00000391045 68 ntBASIC-0.45□□□□□ -2.48
SLC6A13Q9NSD5 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.45□□□□□ -2.48
SLC6A13Q9NSD5 RNA5SP451-201ENST00000410588 110 ntBASIC-0.45□□□□□ -2.48
SLC6A13Q9NSD5 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.45□□□□□ -2.48
SLC6A13Q9NSD5 SNORD126-201ENST00000459475 77 ntBASIC-0.45□□□□□ -2.48
SLC6A13Q9NSD5 AC093729.1-201ENST00000513074 128 ntBASIC-0.45□□□□□ -2.48
SLC6A13Q9NSD5 RNU6-168P-201ENST00000516189 101 ntBASIC-0.45□□□□□ -2.48
SLC6A13Q9NSD5 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.45□□□□□ -2.48
SLC6A13Q9NSD5 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.45□□□□□ -2.48
SLC6A13Q9NSD5 MIR8064-201ENST00000612863 90 ntBASIC-0.45□□□□□ -2.48
SLC6A13Q9NSD5 AC093726.3-201ENST00000637588 150 ntBASIC-0.45□□□□□ -2.48
SLC6A13Q9NSD5 SNORD14C-201ENST00000365382 88 ntBASIC-0.46□□□□□ -2.48
SLC6A13Q9NSD5 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.46□□□□□ -2.48
SLC6A13Q9NSD5 MIRLET7B-201ENST00000385140 83 ntBASIC-0.46□□□□□ -2.48
SLC6A13Q9NSD5 MIR196A2-201ENST00000385189 110 ntBASIC-0.46□□□□□ -2.48
SLC6A13Q9NSD5 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.46□□□□□ -2.48
SLC6A13Q9NSD5 RNU6-592P-201ENST00000411333 103 ntBASIC-0.46□□□□□ -2.48
SLC6A13Q9NSD5 MIR4280-201ENST00000582178 76 ntBASIC-0.46□□□□□ -2.48
SLC6A13Q9NSD5 AL391099.1-201ENST00000624635 187 ntBASIC-0.46□□□□□ -2.48
SLC6A13Q9NSD5 U6.96-201ENST00000636425 70 ntBASIC-0.46□□□□□ -2.48
SLC6A13Q9NSD5 SNORA2.1-201ENST00000363089 137 ntBASIC-0.47□□□□□ -2.48
SLC6A13Q9NSD5 RNU6-340P-201ENST00000364005 107 ntBASIC-0.47□□□□□ -2.48
SLC6A13Q9NSD5 RNA5SP89-201ENST00000410300 108 ntBASIC-0.47□□□□□ -2.48
SLC6A13Q9NSD5 MIR548BB-201ENST00000626714 66 ntBASIC-0.47□□□□□ -2.48
SLC6A13Q9NSD5 RNU6-497P-201ENST00000365316 104 ntBASIC-0.48□□□□□ -2.49
SLC6A13Q9NSD5 snoU13.19-201ENST00000459148 104 ntBASIC-0.48□□□□□ -2.49
SLC6A13Q9NSD5 MIR5704-201ENST00000584029 77 ntBASIC-0.48□□□□□ -2.49
SLC6A13Q9NSD5 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.49□□□□□ -2.49
SLC6A13Q9NSD5 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.49□□□□□ -2.49
SLC6A13Q9NSD5 AC114755.3-201ENST00000481111 251 ntBASIC-0.49□□□□□ -2.49
SLC6A13Q9NSD5 SNORD38.3-201ENST00000516599 73 ntBASIC-0.49□□□□□ -2.49
SLC6A13Q9NSD5 RNU6-844P-201ENST00000517175 102 ntBASIC-0.49□□□□□ -2.49
SLC6A13Q9NSD5 RNA5SP169-201ENST00000517268 117 ntBASIC-0.49□□□□□ -2.49
SLC6A13Q9NSD5 AC140658.3-201ENST00000567603 271 ntBASIC-0.49□□□□□ -2.49
SLC6A13Q9NSD5 MIR4432-201ENST00000581823 84 ntBASIC-0.49□□□□□ -2.49
SLC6A13Q9NSD5 AC090617.8-201ENST00000623339 167 ntBASIC-0.49□□□□□ -2.49
SLC6A13Q9NSD5 snoR1.1-201ENST00000628177 80 ntBASIC-0.49□□□□□ -2.49
SLC6A13Q9NSD5 RNU6-624P-201ENST00000363411 107 ntBASIC-0.5□□□□□ -2.49
SLC6A13Q9NSD5 RNU6-681P-201ENST00000364012 104 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms