Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC244250.2-201ENST00000418731 148 ntBASIC-0.22□□□□□ -2.44
DDX4Q9NQI0 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.23□□□□□ -2.45
DDX4Q9NQI0 MIR655-201ENST00000362159 97 ntBASIC-0.23□□□□□ -2.45
DDX4Q9NQI0 AL450471.1-201ENST00000447509 127 ntBASIC-0.23□□□□□ -2.45
DDX4Q9NQI0 RNU6-274P-201ENST00000459566 107 ntBASIC-0.23□□□□□ -2.45
DDX4Q9NQI0 RNU7-153P-201ENST00000516455 62 ntBASIC-0.23□□□□□ -2.45
DDX4Q9NQI0 SNORD114-15-201ENST00000364687 72 ntBASIC-0.24□□□□□ -2.45
DDX4Q9NQI0 RNU6-219P-201ENST00000364728 107 ntBASIC-0.24□□□□□ -2.45
DDX4Q9NQI0 MIR604-201ENST00000384880 94 ntBASIC-0.24□□□□□ -2.45
DDX4Q9NQI0 RNU6-592P-201ENST00000411333 103 ntBASIC-0.24□□□□□ -2.45
DDX4Q9NQI0 snoU13.19-201ENST00000459148 104 ntBASIC-0.24□□□□□ -2.45
DDX4Q9NQI0 AC093729.1-201ENST00000513074 128 ntBASIC-0.24□□□□□ -2.45
DDX4Q9NQI0 RNU6-844P-201ENST00000517175 102 ntBASIC-0.24□□□□□ -2.45
DDX4Q9NQI0 MIR4263-201ENST00000584745 83 ntBASIC-0.24□□□□□ -2.45
DDX4Q9NQI0 MIR3666-201ENST00000607845 111 ntBASIC-0.24□□□□□ -2.45
DDX4Q9NQI0 U6.81-201ENST00000612550 106 ntBASIC-0.24□□□□□ -2.45
DDX4Q9NQI0 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.25□□□□□ -2.45
DDX4Q9NQI0 SNORA63.6-201ENST00000364921 119 ntBASIC-0.25□□□□□ -2.45
DDX4Q9NQI0 RNU6-382P-201ENST00000365181 106 ntBASIC-0.25□□□□□ -2.45
DDX4Q9NQI0 RNU6-402P-201ENST00000410678 103 ntBASIC-0.25□□□□□ -2.45
DDX4Q9NQI0 snoU13.17-201ENST00000458802 104 ntBASIC-0.25□□□□□ -2.45
DDX4Q9NQI0 AL627230.5-201ENST00000619807 58 ntBASIC-0.25□□□□□ -2.45
DDX4Q9NQI0 MIR101-1-201ENST00000362265 75 ntBASIC-0.26□□□□□ -2.45
DDX4Q9NQI0 RNU6-208P-201ENST00000362431 107 ntBASIC-0.26□□□□□ -2.45
DDX4Q9NQI0 SNORD115-25-201ENST00000362619 82 ntBASIC-0.26□□□□□ -2.45
DDX4Q9NQI0 RNU6-824P-201ENST00000363724 104 ntBASIC-0.26□□□□□ -2.45
DDX4Q9NQI0 MIR582-201ENST00000365731 98 ntBASIC-0.26□□□□□ -2.45
DDX4Q9NQI0 SNORD77.2-201ENST00000391045 68 ntBASIC-0.26□□□□□ -2.45
DDX4Q9NQI0 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.26□□□□□ -2.45
DDX4Q9NQI0 MIR4773-1-201ENST00000637203 78 ntBASIC-0.26□□□□□ -2.45
DDX4Q9NQI0 SNORD114-28-201ENST00000363610 72 ntBASIC-0.27□□□□□ -2.45
DDX4Q9NQI0 RNU6-675P-201ENST00000384236 104 ntBASIC-0.27□□□□□ -2.45
DDX4Q9NQI0 RNU6-752P-201ENST00000516376 102 ntBASIC-0.27□□□□□ -2.45
DDX4Q9NQI0 RNU6-681P-201ENST00000364012 104 ntBASIC-0.28□□□□□ -2.45
DDX4Q9NQI0 RNU6-497P-201ENST00000365316 104 ntBASIC-0.28□□□□□ -2.45
DDX4Q9NQI0 RNY1P7-201ENST00000384743 110 ntBASIC-0.28□□□□□ -2.45
DDX4Q9NQI0 SNORA49-201ENST00000386157 136 ntBASIC-0.28□□□□□ -2.45
DDX4Q9NQI0 RNA5SP300-201ENST00000391197 107 ntBASIC-0.28□□□□□ -2.45
DDX4Q9NQI0 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.28□□□□□ -2.45
DDX4Q9NQI0 SNORA40.17-201ENST00000517256 115 ntBASIC-0.28□□□□□ -2.45
DDX4Q9NQI0 AC108676.2-201ENST00000605225 163 ntBASIC-0.28□□□□□ -2.45
DDX4Q9NQI0 SNORD95.1-201ENST00000364099 68 ntBASIC-0.29□□□□□ -2.46
DDX4Q9NQI0 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.29□□□□□ -2.46
DDX4Q9NQI0 RNA5SP451-201ENST00000410588 110 ntBASIC-0.29□□□□□ -2.46
DDX4Q9NQI0 AP000676.1-201ENST00000533307 52 ntBASIC-0.29□□□□□ -2.46
DDX4Q9NQI0 AL590491.3-201ENST00000610731 82 ntBASIC-0.29□□□□□ -2.46
DDX4Q9NQI0 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.3□□□□□ -2.46
DDX4Q9NQI0 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.3□□□□□ -2.46
DDX4Q9NQI0 RNU6-455P-201ENST00000384681 107 ntBASIC-0.3□□□□□ -2.46
DDX4Q9NQI0 RNU6-320P-201ENST00000516511 106 ntBASIC-0.3□□□□□ -2.46
DDX4Q9NQI0 MIR548BB-201ENST00000626714 66 ntBASIC-0.3□□□□□ -2.46
DDX4Q9NQI0 RNU6-624P-201ENST00000363411 107 ntBASIC-0.31□□□□□ -2.46
DDX4Q9NQI0 RNA5SP275-201ENST00000363936 118 ntBASIC-0.31□□□□□ -2.46
DDX4Q9NQI0 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.31□□□□□ -2.46
DDX4Q9NQI0 RNU6-900P-201ENST00000384498 102 ntBASIC-0.31□□□□□ -2.46
DDX4Q9NQI0 AC096531.1-201ENST00000419107 107 ntBASIC-0.31□□□□□ -2.46
DDX4Q9NQI0 AL691482.2-201ENST00000457453 84 ntBASIC-0.31□□□□□ -2.46
DDX4Q9NQI0 AC021146.9-201ENST00000512503 156 ntBASIC-0.31□□□□□ -2.46
DDX4Q9NQI0 AC140658.3-201ENST00000567603 271 ntBASIC-0.31□□□□□ -2.46
DDX4Q9NQI0 AC145423.2-201ENST00000610631 239 ntBASIC-0.31□□□□□ -2.46
DDX4Q9NQI0 MIR6509-201ENST00000614603 85 ntBASIC-0.31□□□□□ -2.46
DDX4Q9NQI0 MIR4788-201ENST00000639104 80 ntBASIC-0.31□□□□□ -2.46
DDX4Q9NQI0 RNU6-260P-201ENST00000384092 107 ntBASIC-0.32□□□□□ -2.46
DDX4Q9NQI0 MIR9-2-201ENST00000384838 87 ntBASIC-0.32□□□□□ -2.46
DDX4Q9NQI0 RNU6-267P-201ENST00000516714 103 ntBASIC-0.32□□□□□ -2.46
DDX4Q9NQI0 MIR8064-201ENST00000612863 90 ntBASIC-0.32□□□□□ -2.46
DDX4Q9NQI0 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.33□□□□□ -2.46
DDX4Q9NQI0 RNY4P30-201ENST00000410216 95 ntBASIC-0.33□□□□□ -2.46
DDX4Q9NQI0 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.33□□□□□ -2.46
DDX4Q9NQI0 RNU6-557P-201ENST00000516842 110 ntBASIC-0.33□□□□□ -2.46
DDX4Q9NQI0 YWHAEP3-201ENST00000582767 121 ntBASIC-0.33□□□□□ -2.46
DDX4Q9NQI0 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.33□□□□□ -2.46
DDX4Q9NQI0 SNORA2.1-201ENST00000363089 137 ntBASIC-0.34□□□□□ -2.46
DDX4Q9NQI0 RNU6-340P-201ENST00000364005 107 ntBASIC-0.34□□□□□ -2.46
DDX4Q9NQI0 RNU6-990P-201ENST00000364385 104 ntBASIC-0.34□□□□□ -2.46
DDX4Q9NQI0 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.34□□□□□ -2.46
DDX4Q9NQI0 RNU6-49P-201ENST00000384256 107 ntBASIC-0.34□□□□□ -2.46
DDX4Q9NQI0 RPS29P8-201ENST00000445109 171 ntBASIC-0.34□□□□□ -2.46
DDX4Q9NQI0 SNORD114-11-201ENST00000363738 75 ntBASIC-0.35□□□□□ -2.47
DDX4Q9NQI0 RNA5SP368-201ENST00000364298 116 ntBASIC-0.35□□□□□ -2.47
DDX4Q9NQI0 SNORA32.3-201ENST00000384772 121 ntBASIC-0.35□□□□□ -2.47
DDX4Q9NQI0 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.35□□□□□ -2.47
DDX4Q9NQI0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.35□□□□□ -2.47
DDX4Q9NQI0 IGLL4P-201ENST00000614590 133 ntBASIC-0.35□□□□□ -2.47
DDX4Q9NQI0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.35□□□□□ -2.47
DDX4Q9NQI0 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.36□□□□□ -2.47
DDX4Q9NQI0 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.36□□□□□ -2.47
DDX4Q9NQI0 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.36□□□□□ -2.47
DDX4Q9NQI0 AC006160.2-201ENST00000637708 154 ntBASIC-0.36□□□□□ -2.47
DDX4Q9NQI0 RNU6-502P-201ENST00000362419 108 ntBASIC-0.37□□□□□ -2.47
DDX4Q9NQI0 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.37□□□□□ -2.47
DDX4Q9NQI0 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.37□□□□□ -2.47
DDX4Q9NQI0 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.37□□□□□ -2.47
DDX4Q9NQI0 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.37□□□□□ -2.47
DDX4Q9NQI0 MIR3657-201ENST00000584818 117 ntBASIC-0.37□□□□□ -2.47
DDX4Q9NQI0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.37□□□□□ -2.47
DDX4Q9NQI0 RNY1P1-201ENST00000364372 112 ntBASIC-0.38□□□□□ -2.47
DDX4Q9NQI0 SNORD14C-201ENST00000365382 88 ntBASIC-0.38□□□□□ -2.47
DDX4Q9NQI0 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.38□□□□□ -2.47
DDX4Q9NQI0 SNORD56B-201ENST00000384713 71 ntBASIC-0.38□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 193.2 ms