Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
ZNF541Q9H0D2 AL035461.1-201ENST00000421490 332 ntBASIC-0.3□□□□□ -2.46
ZNF541Q9H0D2 RNU7-24P-201ENST00000458867 62 ntBASIC-0.3□□□□□ -2.46
ZNF541Q9H0D2 SNORA40.13-201ENST00000516379 120 ntBASIC-0.3□□□□□ -2.46
ZNF541Q9H0D2 RNU6-44P-201ENST00000384045 107 ntBASIC-0.31□□□□□ -2.46
ZNF541Q9H0D2 SNORD75.2-201ENST00000408784 58 ntBASIC-0.31□□□□□ -2.46
ZNF541Q9H0D2 AP000676.1-201ENST00000533307 52 ntBASIC-0.31□□□□□ -2.46
ZNF541Q9H0D2 MIR3666-201ENST00000607845 111 ntBASIC-0.31□□□□□ -2.46
ZNF541Q9H0D2 RNU6-824P-201ENST00000363724 104 ntBASIC-0.32□□□□□ -2.46
ZNF541Q9H0D2 RNU6-455P-201ENST00000384681 107 ntBASIC-0.32□□□□□ -2.46
ZNF541Q9H0D2 MIR9-2-201ENST00000384838 87 ntBASIC-0.32□□□□□ -2.46
ZNF541Q9H0D2 MALAT1.1-201ENST00000618249 95 ntBASIC-0.32□□□□□ -2.46
ZNF541Q9H0D2 RNU6-640P-201ENST00000363693 105 ntBASIC-0.33□□□□□ -2.46
ZNF541Q9H0D2 RNU6-990P-201ENST00000364385 104 ntBASIC-0.33□□□□□ -2.46
ZNF541Q9H0D2 RNU6-382P-201ENST00000365181 106 ntBASIC-0.33□□□□□ -2.46
ZNF541Q9H0D2 RNU6-320P-201ENST00000516511 106 ntBASIC-0.33□□□□□ -2.46
ZNF541Q9H0D2 RNU5F-1-201ENST00000362507 117 ntBASIC-0.34□□□□□ -2.46
ZNF541Q9H0D2 SNORD115-25-201ENST00000362619 82 ntBASIC-0.34□□□□□ -2.46
ZNF541Q9H0D2 MIR488-201ENST00000365739 83 ntBASIC-0.34□□□□□ -2.46
ZNF541Q9H0D2 RNU6-32P-201ENST00000383948 107 ntBASIC-0.34□□□□□ -2.46
ZNF541Q9H0D2 RNU6-13P-201ENST00000384248 107 ntBASIC-0.34□□□□□ -2.46
ZNF541Q9H0D2 RNU6-905P-201ENST00000384434 107 ntBASIC-0.34□□□□□ -2.46
ZNF541Q9H0D2 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.34□□□□□ -2.46
ZNF541Q9H0D2 RNU6-12P-201ENST00000384604 107 ntBASIC-0.34□□□□□ -2.46
ZNF541Q9H0D2 RNU6-41P-201ENST00000384741 107 ntBASIC-0.34□□□□□ -2.46
ZNF541Q9H0D2 RNA5SP300-201ENST00000391197 107 ntBASIC-0.34□□□□□ -2.46
ZNF541Q9H0D2 MIR4668-201ENST00000582284 70 ntBASIC-0.34□□□□□ -2.46
ZNF541Q9H0D2 MIR4263-201ENST00000584745 83 ntBASIC-0.34□□□□□ -2.46
ZNF541Q9H0D2 AL590491.3-201ENST00000610731 82 ntBASIC-0.34□□□□□ -2.46
ZNF541Q9H0D2 MIR1468-201ENST00000410600 86 ntBASIC-0.35□□□□□ -2.46
ZNF541Q9H0D2 SNX3P1X-201ENST00000414887 175 ntBASIC-0.35□□□□□ -2.46
ZNF541Q9H0D2 SNORD57-201ENST00000448188 72 ntBASIC-0.35□□□□□ -2.46
ZNF541Q9H0D2 SNORA40.17-201ENST00000517256 115 ntBASIC-0.35□□□□□ -2.46
ZNF541Q9H0D2 RNU6-633P-201ENST00000362612 103 ntBASIC-0.36□□□□□ -2.47
ZNF541Q9H0D2 RNA5SP275-201ENST00000363936 118 ntBASIC-0.36□□□□□ -2.47
ZNF541Q9H0D2 MIR519C-201ENST00000385053 87 ntBASIC-0.36□□□□□ -2.47
ZNF541Q9H0D2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.36□□□□□ -2.47
ZNF541Q9H0D2 SNORD2-201ENST00000459163 69 ntBASIC-0.36□□□□□ -2.47
ZNF541Q9H0D2 RNU6-900P-201ENST00000384498 102 ntBASIC-0.37□□□□□ -2.47
ZNF541Q9H0D2 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.37□□□□□ -2.47
ZNF541Q9H0D2 AC096531.1-201ENST00000419107 107 ntBASIC-0.37□□□□□ -2.47
ZNF541Q9H0D2 AC006254.2-201ENST00000603259 279 ntBASIC-0.37□□□□□ -2.47
ZNF541Q9H0D2 MIR4773-1-201ENST00000637203 78 ntBASIC-0.37□□□□□ -2.47
ZNF541Q9H0D2 RNU6-502P-201ENST00000362419 108 ntBASIC-0.38□□□□□ -2.47
ZNF541Q9H0D2 SNORA63.6-201ENST00000364921 119 ntBASIC-0.38□□□□□ -2.47
ZNF541Q9H0D2 RNY1P9-201ENST00000532431 109 ntBASIC-0.38□□□□□ -2.47
ZNF541Q9H0D2 MIR4788-201ENST00000639104 80 ntBASIC-0.38□□□□□ -2.47
ZNF541Q9H0D2 RNU6-219P-201ENST00000364728 107 ntBASIC-0.38□□□□□ -2.47
ZNF541Q9H0D2 RNU7-55P-201ENST00000459426 62 ntBASIC-0.38□□□□□ -2.47
ZNF541Q9H0D2 RNU6-267P-201ENST00000516714 103 ntBASIC-0.38□□□□□ -2.47
ZNF541Q9H0D2 U6.81-201ENST00000612550 106 ntBASIC-0.38□□□□□ -2.47
ZNF541Q9H0D2 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.39□□□□□ -2.47
ZNF541Q9H0D2 SNORD116-22-201ENST00000384430 92 ntBASIC-0.39□□□□□ -2.47
ZNF541Q9H0D2 SNORD56B-201ENST00000384713 71 ntBASIC-0.39□□□□□ -2.47
ZNF541Q9H0D2 snoU13.13-201ENST00000458842 104 ntBASIC-0.39□□□□□ -2.47
ZNF541Q9H0D2 RNU6-497P-201ENST00000365316 104 ntBASIC-0.4□□□□□ -2.47
ZNF541Q9H0D2 RNY1P7-201ENST00000384743 110 ntBASIC-0.4□□□□□ -2.47
ZNF541Q9H0D2 MIR203A-201ENST00000384836 110 ntBASIC-0.4□□□□□ -2.47
ZNF541Q9H0D2 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
ZNF541Q9H0D2 RNU6-337P-201ENST00000391243 106 ntBASIC-0.4□□□□□ -2.47
ZNF541Q9H0D2 RNU6-402P-201ENST00000410678 103 ntBASIC-0.4□□□□□ -2.47
ZNF541Q9H0D2 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.4□□□□□ -2.47
ZNF541Q9H0D2 MIR548AZ-201ENST00000616567 95 ntBASIC-0.4□□□□□ -2.47
ZNF541Q9H0D2 SNORD114-11-201ENST00000363738 75 ntBASIC-0.41□□□□□ -2.48
ZNF541Q9H0D2 RNU6-260P-201ENST00000384092 107 ntBASIC-0.41□□□□□ -2.48
ZNF541Q9H0D2 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.41□□□□□ -2.48
ZNF541Q9H0D2 MIR6773-201ENST00000612812 74 ntBASIC-0.41□□□□□ -2.48
ZNF541Q9H0D2 MIR6509-201ENST00000614603 85 ntBASIC-0.41□□□□□ -2.48
ZNF541Q9H0D2 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.42□□□□□ -2.48
ZNF541Q9H0D2 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.42□□□□□ -2.48
ZNF541Q9H0D2 AL450471.1-201ENST00000447509 127 ntBASIC-0.42□□□□□ -2.48
ZNF541Q9H0D2 AC021146.9-201ENST00000512503 156 ntBASIC-0.42□□□□□ -2.48
ZNF541Q9H0D2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.42□□□□□ -2.48
ZNF541Q9H0D2 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.42□□□□□ -2.48
ZNF541Q9H0D2 RNU6-208P-201ENST00000362431 107 ntBASIC-0.43□□□□□ -2.48
ZNF541Q9H0D2 RNA5SP89-201ENST00000410300 108 ntBASIC-0.43□□□□□ -2.48
ZNF541Q9H0D2 AL691482.2-201ENST00000457453 84 ntBASIC-0.43□□□□□ -2.48
ZNF541Q9H0D2 RNU6-274P-201ENST00000459566 107 ntBASIC-0.43□□□□□ -2.48
ZNF541Q9H0D2 RNU6-168P-201ENST00000516189 101 ntBASIC-0.43□□□□□ -2.48
ZNF541Q9H0D2 RNA5SP66-201ENST00000517178 101 ntBASIC-0.43□□□□□ -2.48
ZNF541Q9H0D2 MIR4280-201ENST00000582178 76 ntBASIC-0.43□□□□□ -2.48
ZNF541Q9H0D2 MIR3657-201ENST00000584818 117 ntBASIC-0.43□□□□□ -2.48
ZNF541Q9H0D2 uc_338.36-201ENST00000622331 158 ntBASIC-0.43□□□□□ -2.48
ZNF541Q9H0D2 SNORD75.1-201ENST00000408373 60 ntBASIC-0.44□□□□□ -2.48
ZNF541Q9H0D2 RNU6-592P-201ENST00000411333 103 ntBASIC-0.44□□□□□ -2.48
ZNF541Q9H0D2 AC093729.1-201ENST00000513074 128 ntBASIC-0.44□□□□□ -2.48
ZNF541Q9H0D2 RNA5SP147-201ENST00000516493 109 ntBASIC-0.44□□□□□ -2.48
ZNF541Q9H0D2 RNU6-624P-201ENST00000363411 107 ntBASIC-0.45□□□□□ -2.48
ZNF541Q9H0D2 SNORD115-37-201ENST00000363768 82 ntBASIC-0.45□□□□□ -2.48
ZNF541Q9H0D2 RNU6-340P-201ENST00000364005 107 ntBASIC-0.45□□□□□ -2.48
ZNF541Q9H0D2 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.45□□□□□ -2.48
ZNF541Q9H0D2 RNU6-901P-201ENST00000384593 106 ntBASIC-0.45□□□□□ -2.48
ZNF541Q9H0D2 SNORD77.2-201ENST00000391045 68 ntBASIC-0.45□□□□□ -2.48
ZNF541Q9H0D2 AL445193.1-201ENST00000441183 141 ntBASIC-0.45□□□□□ -2.48
ZNF541Q9H0D2 AC140658.3-201ENST00000567603 271 ntBASIC-0.45□□□□□ -2.48
ZNF541Q9H0D2 MIR3681-201ENST00000580089 72 ntBASIC-0.45□□□□□ -2.48
ZNF541Q9H0D2 MIR548BB-201ENST00000626714 66 ntBASIC-0.45□□□□□ -2.48
ZNF541Q9H0D2 RNU6-973P-201ENST00000364690 107 ntBASIC-0.46□□□□□ -2.48
ZNF541Q9H0D2 SNORD14C-201ENST00000365382 88 ntBASIC-0.46□□□□□ -2.48
ZNF541Q9H0D2 MIRLET7B-201ENST00000385140 83 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms