Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AL450471.1-201ENST00000447509 127 ntBASIC-0.32□□□□□ -2.46
CCDC28BQ9BUN5 RNU6-274P-201ENST00000459566 107 ntBASIC-0.32□□□□□ -2.46
CCDC28BQ9BUN5 MIR4802-201ENST00000581881 80 ntBASIC-0.32□□□□□ -2.46
CCDC28BQ9BUN5 MIR4645-201ENST00000583158 77 ntBASIC-0.32□□□□□ -2.46
CCDC28BQ9BUN5 AL590491.3-201ENST00000610731 82 ntBASIC-0.33□□□□□ -2.46
CCDC28BQ9BUN5 MIR4773-1-201ENST00000637203 78 ntBASIC-0.33□□□□□ -2.46
CCDC28BQ9BUN5 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.34□□□□□ -2.46
CCDC28BQ9BUN5 RNU6-219P-201ENST00000364728 107 ntBASIC-0.34□□□□□ -2.46
CCDC28BQ9BUN5 MIR488-201ENST00000365739 83 ntBASIC-0.34□□□□□ -2.46
CCDC28BQ9BUN5 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.34□□□□□ -2.46
CCDC28BQ9BUN5 RNU7-55P-201ENST00000459426 62 ntBASIC-0.34□□□□□ -2.46
CCDC28BQ9BUN5 AC093729.1-201ENST00000513074 128 ntBASIC-0.34□□□□□ -2.46
CCDC28BQ9BUN5 RNU6-168P-201ENST00000516189 101 ntBASIC-0.34□□□□□ -2.46
CCDC28BQ9BUN5 RNU6-502P-201ENST00000362419 108 ntBASIC-0.35□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-208P-201ENST00000362431 107 ntBASIC-0.35□□□□□ -2.47
CCDC28BQ9BUN5 SNORD114-28-201ENST00000363610 72 ntBASIC-0.35□□□□□ -2.47
CCDC28BQ9BUN5 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.35□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-497P-201ENST00000365316 104 ntBASIC-0.35□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-260P-201ENST00000384092 107 ntBASIC-0.35□□□□□ -2.47
CCDC28BQ9BUN5 SNORD77.2-201ENST00000391045 68 ntBASIC-0.35□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-752P-201ENST00000516376 102 ntBASIC-0.35□□□□□ -2.47
CCDC28BQ9BUN5 MIR4636-201ENST00000582271 80 ntBASIC-0.35□□□□□ -2.47
CCDC28BQ9BUN5 AP001180.6-201ENST00000584918 159 ntBASIC-0.35□□□□□ -2.47
CCDC28BQ9BUN5 MIR4788-201ENST00000639104 80 ntBASIC-0.35□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-681P-201ENST00000364012 104 ntBASIC-0.36□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-990P-201ENST00000364385 104 ntBASIC-0.36□□□□□ -2.47
CCDC28BQ9BUN5 AC021146.9-201ENST00000512503 156 ntBASIC-0.36□□□□□ -2.47
CCDC28BQ9BUN5 RNA5SP66-201ENST00000517178 101 ntBASIC-0.36□□□□□ -2.47
CCDC28BQ9BUN5 SNORA2.1-201ENST00000363089 137 ntBASIC-0.37□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-624P-201ENST00000363411 107 ntBASIC-0.37□□□□□ -2.47
CCDC28BQ9BUN5 SNORD14C-201ENST00000365382 88 ntBASIC-0.37□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-402P-201ENST00000410678 103 ntBASIC-0.37□□□□□ -2.47
CCDC28BQ9BUN5 AL691482.2-201ENST00000457453 84 ntBASIC-0.37□□□□□ -2.47
CCDC28BQ9BUN5 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.37□□□□□ -2.47
CCDC28BQ9BUN5 MIR6509-201ENST00000614603 85 ntBASIC-0.37□□□□□ -2.47
CCDC28BQ9BUN5 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.37□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-153P-201ENST00000364422 104 ntBASIC-0.38□□□□□ -2.47
CCDC28BQ9BUN5 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.38□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-675P-201ENST00000384236 104 ntBASIC-0.38□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-35P-201ENST00000384530 107 ntBASIC-0.38□□□□□ -2.47
CCDC28BQ9BUN5 RNA5SP89-201ENST00000410300 108 ntBASIC-0.38□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-320P-201ENST00000516511 106 ntBASIC-0.38□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-844P-201ENST00000517175 102 ntBASIC-0.38□□□□□ -2.47
CCDC28BQ9BUN5 AC140658.3-201ENST00000567603 271 ntBASIC-0.38□□□□□ -2.47
CCDC28BQ9BUN5 MIR8064-201ENST00000612863 90 ntBASIC-0.38□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-340P-201ENST00000364005 107 ntBASIC-0.39□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-973P-201ENST00000364690 107 ntBASIC-0.39□□□□□ -2.47
CCDC28BQ9BUN5 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.39□□□□□ -2.47
CCDC28BQ9BUN5 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.39□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-901P-201ENST00000384593 106 ntBASIC-0.39□□□□□ -2.47
CCDC28BQ9BUN5 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
CCDC28BQ9BUN5 YWHAEP3-201ENST00000582767 121 ntBASIC-0.39□□□□□ -2.47
CCDC28BQ9BUN5 MIR6773-201ENST00000612812 74 ntBASIC-0.39□□□□□ -2.47
CCDC28BQ9BUN5 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.39□□□□□ -2.47
CCDC28BQ9BUN5 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.39□□□□□ -2.47
CCDC28BQ9BUN5 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.4□□□□□ -2.47
CCDC28BQ9BUN5 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.4□□□□□ -2.47
CCDC28BQ9BUN5 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.4□□□□□ -2.47
CCDC28BQ9BUN5 RNU6-557P-201ENST00000516842 110 ntBASIC-0.4□□□□□ -2.47
CCDC28BQ9BUN5 MIR3657-201ENST00000584818 117 ntBASIC-0.4□□□□□ -2.47
CCDC28BQ9BUN5 MIR548BB-201ENST00000626714 66 ntBASIC-0.4□□□□□ -2.47
CCDC28BQ9BUN5 AC093726.3-201ENST00000637588 150 ntBASIC-0.4□□□□□ -2.47
CCDC28BQ9BUN5 RNY1P7-201ENST00000384743 110 ntBASIC-0.41□□□□□ -2.48
CCDC28BQ9BUN5 snoU13.13-201ENST00000458842 104 ntBASIC-0.41□□□□□ -2.48
CCDC28BQ9BUN5 RNA5SP395-201ENST00000516567 118 ntBASIC-0.41□□□□□ -2.48
CCDC28BQ9BUN5 RNU6-267P-201ENST00000516714 103 ntBASIC-0.41□□□□□ -2.48
CCDC28BQ9BUN5 MIR4493-201ENST00000584016 73 ntBASIC-0.41□□□□□ -2.48
CCDC28BQ9BUN5 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
CCDC28BQ9BUN5 RNA5SP275-201ENST00000363936 118 ntBASIC-0.42□□□□□ -2.48
CCDC28BQ9BUN5 SNORD56B-201ENST00000384713 71 ntBASIC-0.42□□□□□ -2.48
CCDC28BQ9BUN5 MIRLET7B-201ENST00000385140 83 ntBASIC-0.42□□□□□ -2.48
CCDC28BQ9BUN5 MIR1265-201ENST00000408444 86 ntBASIC-0.42□□□□□ -2.48
CCDC28BQ9BUN5 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.42□□□□□ -2.48
CCDC28BQ9BUN5 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.42□□□□□ -2.48
CCDC28BQ9BUN5 SNORD126-201ENST00000459475 77 ntBASIC-0.42□□□□□ -2.48
CCDC28BQ9BUN5 AL391099.1-201ENST00000624635 187 ntBASIC-0.42□□□□□ -2.48
CCDC28BQ9BUN5 U6.96-201ENST00000636425 70 ntBASIC-0.42□□□□□ -2.48
CCDC28BQ9BUN5 MIR101-1-201ENST00000362265 75 ntBASIC-0.43□□□□□ -2.48
CCDC28BQ9BUN5 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.43□□□□□ -2.48
CCDC28BQ9BUN5 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.43□□□□□ -2.48
CCDC28BQ9BUN5 RNU6-337P-201ENST00000391243 106 ntBASIC-0.43□□□□□ -2.48
CCDC28BQ9BUN5 AC096531.1-201ENST00000419107 107 ntBASIC-0.43□□□□□ -2.48
CCDC28BQ9BUN5 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.43□□□□□ -2.48
CCDC28BQ9BUN5 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.43□□□□□ -2.48
CCDC28BQ9BUN5 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.44□□□□□ -2.48
CCDC28BQ9BUN5 SNORD114-11-201ENST00000363738 75 ntBASIC-0.44□□□□□ -2.48
CCDC28BQ9BUN5 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.44□□□□□ -2.48
CCDC28BQ9BUN5 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.44□□□□□ -2.48
CCDC28BQ9BUN5 MIR203A-201ENST00000384836 110 ntBASIC-0.44□□□□□ -2.48
CCDC28BQ9BUN5 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.44□□□□□ -2.48
CCDC28BQ9BUN5 RNU6-758P-201ENST00000516292 89 ntBASIC-0.44□□□□□ -2.48
CCDC28BQ9BUN5 MIR4280-201ENST00000582178 76 ntBASIC-0.44□□□□□ -2.48
CCDC28BQ9BUN5 snoR1.1-201ENST00000628177 80 ntBASIC-0.44□□□□□ -2.48
CCDC28BQ9BUN5 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.45□□□□□ -2.48
CCDC28BQ9BUN5 MIR604-201ENST00000384880 94 ntBASIC-0.45□□□□□ -2.48
CCDC28BQ9BUN5 Z95118.1-201ENST00000421372 247 ntBASIC-0.45□□□□□ -2.48
CCDC28BQ9BUN5 MIR6851-201ENST00000617060 67 ntBASIC-0.45□□□□□ -2.48
CCDC28BQ9BUN5 SNORD115-23-201ENST00000364461 82 ntBASIC-0.46□□□□□ -2.48
CCDC28BQ9BUN5 RNU6-49P-201ENST00000384256 107 ntBASIC-0.46□□□□□ -2.48
CCDC28BQ9BUN5 SNORA13-201ENST00000458790 133 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 216.8 ms