Protein–RNA interactions for Protein: Q96PN7

TRERF1, Transcriptional-regulating factor 1, humanhuman

Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1Q96PN7 MIR7107-201ENST00000611489 80 ntBASIC1.37□□□□□ -2.19
TRERF1Q96PN7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.36□□□□□ -2.19
TRERF1Q96PN7 RNA5SP268-201ENST00000516828 124 ntBASIC1.36□□□□□ -2.19
TRERF1Q96PN7 AC011195.1-201ENST00000578177 177 ntBASIC1.36□□□□□ -2.19
TRERF1Q96PN7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
TRERF1Q96PN7 SNORA25.8-201ENST00000364831 128 ntBASIC1.35□□□□□ -2.19
TRERF1Q96PN7 MIR516B1-201ENST00000385211 90 ntBASIC1.35□□□□□ -2.19
TRERF1Q96PN7 SNORA40.16-201ENST00000517238 121 ntBASIC1.35□□□□□ -2.19
TRERF1Q96PN7 MIR4452-201ENST00000583004 71 ntBASIC1.35□□□□□ -2.19
TRERF1Q96PN7 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.34□□□□□ -2.19
TRERF1Q96PN7 SNORD114-22-201ENST00000365423 72 ntBASIC1.34□□□□□ -2.19
TRERF1Q96PN7 MIR548F3-201ENST00000408509 87 ntBASIC1.34□□□□□ -2.19
TRERF1Q96PN7 SNORD99-201ENST00000408612 74 ntBASIC1.34□□□□□ -2.19
TRERF1Q96PN7 U6.96-201ENST00000636425 70 ntBASIC1.34□□□□□ -2.19
TRERF1Q96PN7 SNORD114-27-201ENST00000363766 70 ntBASIC1.33□□□□□ -2.2
TRERF1Q96PN7 MIR200A-201ENST00000384875 90 ntBASIC1.33□□□□□ -2.2
TRERF1Q96PN7 MIR1285-1-201ENST00000408593 84 ntBASIC1.33□□□□□ -2.2
TRERF1Q96PN7 RNA5SP94-201ENST00000516917 108 ntBASIC1.33□□□□□ -2.2
TRERF1Q96PN7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.33□□□□□ -2.2
TRERF1Q96PN7 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.33□□□□□ -2.2
TRERF1Q96PN7 Y_RNA.355-201ENST00000365462 98 ntBASIC1.32□□□□□ -2.2
TRERF1Q96PN7 RNU6-518P-201ENST00000516056 96 ntBASIC1.32□□□□□ -2.2
TRERF1Q96PN7 MIR548AG1-201ENST00000579932 66 ntBASIC1.32□□□□□ -2.2
TRERF1Q96PN7 MIR4295-201ENST00000585286 85 ntBASIC1.32□□□□□ -2.2
TRERF1Q96PN7 SNORD116-16-201ENST00000384533 92 ntBASIC1.31□□□□□ -2.2
TRERF1Q96PN7 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
TRERF1Q96PN7 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.31□□□□□ -2.2
TRERF1Q96PN7 HMGN2P22-201ENST00000427588 175 ntBASIC1.31□□□□□ -2.2
TRERF1Q96PN7 RNA5SP255-201ENST00000516370 107 ntBASIC1.31□□□□□ -2.2
TRERF1Q96PN7 AC025627.3-201ENST00000582078 182 ntBASIC1.31□□□□□ -2.2
TRERF1Q96PN7 AC087343.1-201ENST00000477341 475 ntBASIC1.3□□□□□ -2.2
TRERF1Q96PN7 MIR548X-201ENST00000580069 75 ntBASIC1.3□□□□□ -2.2
TRERF1Q96PN7 RNU1-29P-201ENST00000606574 126 ntBASIC1.3□□□□□ -2.2
TRERF1Q96PN7 MIR7110-201ENST00000612638 86 ntBASIC1.3□□□□□ -2.2
TRERF1Q96PN7 Y_RNA.74-201ENST00000362911 99 ntBASIC1.29□□□□□ -2.2
TRERF1Q96PN7 RNU1-93P-201ENST00000364704 169 ntBASIC1.29□□□□□ -2.2
TRERF1Q96PN7 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
TRERF1Q96PN7 RNU1-124P-201ENST00000363861 145 ntBASIC1.28□□□□□ -2.2
TRERF1Q96PN7 Y_RNA.282-201ENST00000364793 102 ntBASIC1.28□□□□□ -2.2
TRERF1Q96PN7 MIR519A2-201ENST00000384990 87 ntBASIC1.28□□□□□ -2.2
TRERF1Q96PN7 MIR1255B2-201ENST00000408618 67 ntBASIC1.28□□□□□ -2.2
TRERF1Q96PN7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.28□□□□□ -2.2
TRERF1Q96PN7 AL021921.1-201ENST00000442774 93 ntBASIC1.28□□□□□ -2.2
TRERF1Q96PN7 AC243829.6-201ENST00000612652 106 ntBASIC1.28□□□□□ -2.2
TRERF1Q96PN7 RNU6-810P-201ENST00000364001 107 ntBASIC1.27□□□□□ -2.21
TRERF1Q96PN7 SNORD114-24-201ENST00000365029 72 ntBASIC1.27□□□□□ -2.21
TRERF1Q96PN7 RNY1P8-201ENST00000383970 114 ntBASIC1.27□□□□□ -2.21
TRERF1Q96PN7 RNU6-939P-201ENST00000384634 107 ntBASIC1.27□□□□□ -2.21
TRERF1Q96PN7 MIR545-201ENST00000385085 106 ntBASIC1.27□□□□□ -2.21
TRERF1Q96PN7 AC243829.3-201ENST00000622177 108 ntBASIC1.27□□□□□ -2.21
TRERF1Q96PN7 MIR527-201ENST00000385244 85 ntBASIC1.26□□□□□ -2.21
TRERF1Q96PN7 SNORA40B-201ENST00000385573 128 ntBASIC1.26□□□□□ -2.21
TRERF1Q96PN7 MIR7111-201ENST00000619751 72 ntBASIC1.26□□□□□ -2.21
TRERF1Q96PN7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
TRERF1Q96PN7 MIR6767-201ENST00000637302 66 ntBASIC1.25□□□□□ -2.21
TRERF1Q96PN7 RNA5SP222-201ENST00000411039 105 ntBASIC1.24□□□□□ -2.21
TRERF1Q96PN7 Y_RNA.118-201ENST00000363300 101 ntBASIC1.23□□□□□ -2.21
TRERF1Q96PN7 MIR520E-201ENST00000384867 87 ntBASIC1.23□□□□□ -2.21
TRERF1Q96PN7 RNU6-337P-201ENST00000391243 106 ntBASIC1.23□□□□□ -2.21
TRERF1Q96PN7 SNORD1B-201ENST00000363091 84 ntBASIC1.22□□□□□ -2.21
TRERF1Q96PN7 RNU6-838P-201ENST00000363399 108 ntBASIC1.22□□□□□ -2.21
TRERF1Q96PN7 MIR618-201ENST00000385287 98 ntBASIC1.22□□□□□ -2.21
TRERF1Q96PN7 SNORA49-201ENST00000386157 136 ntBASIC1.22□□□□□ -2.21
TRERF1Q96PN7 RNU6-172P-201ENST00000411000 93 ntBASIC1.22□□□□□ -2.21
TRERF1Q96PN7 AC069271.1-201ENST00000445577 156 ntBASIC1.22□□□□□ -2.21
TRERF1Q96PN7 AC244090.1-201ENST00000441884 93 ntBASIC1.21□□□□□ -2.22
TRERF1Q96PN7 MIR4490-201ENST00000582647 84 ntBASIC1.21□□□□□ -2.22
TRERF1Q96PN7 SNORD114-21-201ENST00000606412 72 ntBASIC1.21□□□□□ -2.22
TRERF1Q96PN7 MIR20A-201ENST00000362279 71 ntBASIC1.2□□□□□ -2.22
TRERF1Q96PN7 RNA5SP517-201ENST00000364724 117 ntBASIC1.2□□□□□ -2.22
TRERF1Q96PN7 OR2A41P-201ENST00000473586 105 ntBASIC1.2□□□□□ -2.22
TRERF1Q96PN7 Y_RNA.109-201ENST00000363215 102 ntBASIC1.19□□□□□ -2.22
TRERF1Q96PN7 RNU4-45P-201ENST00000365469 141 ntBASIC1.19□□□□□ -2.22
TRERF1Q96PN7 RNU6-246P-201ENST00000384702 107 ntBASIC1.19□□□□□ -2.22
TRERF1Q96PN7 RPS29P1-201ENST00000465274 159 ntBASIC1.19□□□□□ -2.22
TRERF1Q96PN7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.19□□□□□ -2.22
TRERF1Q96PN7 snoU13.18-201ENST00000459483 104 ntBASIC1.18□□□□□ -2.22
TRERF1Q96PN7 RNU6-1232P-201ENST00000516299 86 ntBASIC1.18□□□□□ -2.22
TRERF1Q96PN7 SNORA25.18-201ENST00000607153 114 ntBASIC1.18□□□□□ -2.22
TRERF1Q96PN7 MIR6773-201ENST00000612812 74 ntBASIC1.18□□□□□ -2.22
TRERF1Q96PN7 MIR489-201ENST00000384923 84 ntBASIC1.17□□□□□ -2.22
TRERF1Q96PN7 ACA64.5-201ENST00000516207 127 ntBASIC1.17□□□□□ -2.22
TRERF1Q96PN7 RNA5SP220-201ENST00000516298 104 ntBASIC1.17□□□□□ -2.22
TRERF1Q96PN7 RNU6-419P-201ENST00000517030 63 ntBASIC1.17□□□□□ -2.22
TRERF1Q96PN7 SNORD115-25-201ENST00000362619 82 ntBASIC1.16□□□□□ -2.22
TRERF1Q96PN7 RNU4-38P-201ENST00000364472 129 ntBASIC1.16□□□□□ -2.22
TRERF1Q96PN7 RNU6-42P-201ENST00000384165 107 ntBASIC1.16□□□□□ -2.22
TRERF1Q96PN7 RNU7-188P-201ENST00000517063 64 ntBASIC1.16□□□□□ -2.22
TRERF1Q96PN7 AL353765.1-201ENST00000605514 183 ntBASIC1.16□□□□□ -2.22
TRERF1Q96PN7 RNU6-924P-201ENST00000362926 108 ntBASIC1.15□□□□□ -2.23
TRERF1Q96PN7 RNU6-175P-201ENST00000516896 107 ntBASIC1.15□□□□□ -2.23
TRERF1Q96PN7 MIR6734-201ENST00000621166 68 ntBASIC1.15□□□□□ -2.23
TRERF1Q96PN7 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.15□□□□□ -2.23
TRERF1Q96PN7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
TRERF1Q96PN7 SNORA36.2-201ENST00000384004 127 ntBASIC1.14□□□□□ -2.23
TRERF1Q96PN7 MIR5706-201ENST00000579841 80 ntBASIC1.14□□□□□ -2.23
TRERF1Q96PN7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TRERF1Q96PN7 MIR373-201ENST00000362273 69 ntBASIC1.13□□□□□ -2.23
TRERF1Q96PN7 MIR579-201ENST00000385221 98 ntBASIC1.13□□□□□ -2.23
TRERF1Q96PN7 RPL39P28-201ENST00000465655 155 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms