Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 MIR548AL-201ENST00000578416 97 ntBASIC1.69□□□□□ -2.14
TRIM47Q96LD4 MIR4422-201ENST00000581938 83 ntBASIC1.69□□□□□ -2.14
TRIM47Q96LD4 AC022709.1-201ENST00000615967 87 ntBASIC1.69□□□□□ -2.14
TRIM47Q96LD4 MIR6515-201ENST00000619843 57 ntBASIC1.69□□□□□ -2.14
TRIM47Q96LD4 AC243829.3-201ENST00000622177 108 ntBASIC1.69□□□□□ -2.14
TRIM47Q96LD4 MIR1304-201ENST00000408243 91 ntBASIC1.68□□□□□ -2.14
TRIM47Q96LD4 SCARNA16.5-201ENST00000517114 183 ntBASIC1.68□□□□□ -2.14
TRIM47Q96LD4 AC243829.6-201ENST00000612652 106 ntBASIC1.68□□□□□ -2.14
TRIM47Q96LD4 RNU6-997P-201ENST00000384725 107 ntBASIC1.67□□□□□ -2.14
TRIM47Q96LD4 MIR579-201ENST00000385221 98 ntBASIC1.67□□□□□ -2.14
TRIM47Q96LD4 RNU1-78P-201ENST00000391248 165 ntBASIC1.67□□□□□ -2.14
TRIM47Q96LD4 U7.7-201ENST00000459276 60 ntBASIC1.67□□□□□ -2.14
TRIM47Q96LD4 MIR3678-201ENST00000578455 94 ntBASIC1.67□□□□□ -2.14
TRIM47Q96LD4 AC006210.1-201ENST00000424882 111 ntBASIC1.65□□□□□ -2.15
TRIM47Q96LD4 RNU6-1206P-201ENST00000516339 103 ntBASIC1.65□□□□□ -2.15
TRIM47Q96LD4 MIR6779-201ENST00000617283 64 ntBASIC1.65□□□□□ -2.15
TRIM47Q96LD4 MIR429-201ENST00000362106 83 ntBASIC1.64□□□□□ -2.15
TRIM47Q96LD4 RNA5SP325-201ENST00000363756 130 ntBASIC1.64□□□□□ -2.15
TRIM47Q96LD4 RNU1-93P-201ENST00000364704 169 ntBASIC1.64□□□□□ -2.15
TRIM47Q96LD4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.64□□□□□ -2.15
TRIM47Q96LD4 RNU6-458P-201ENST00000384179 107 ntBASIC1.63□□□□□ -2.15
TRIM47Q96LD4 SNORD110-201ENST00000408189 75 ntBASIC1.63□□□□□ -2.15
TRIM47Q96LD4 U6.58-201ENST00000613107 107 ntBASIC1.63□□□□□ -2.15
TRIM47Q96LD4 U6.103-201ENST00000637085 61 ntBASIC1.63□□□□□ -2.15
TRIM47Q96LD4 Y_RNA.69-201ENST00000362885 109 ntBASIC1.62□□□□□ -2.15
TRIM47Q96LD4 SNORD105-201ENST00000386910 85 ntBASIC1.62□□□□□ -2.15
TRIM47Q96LD4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.62□□□□□ -2.15
TRIM47Q96LD4 SNORD89-201ENST00000390981 114 ntBASIC1.62□□□□□ -2.15
TRIM47Q96LD4 RNU7-160P-201ENST00000516660 62 ntBASIC1.62□□□□□ -2.15
TRIM47Q96LD4 SNORA70.22-201ENST00000517160 124 ntBASIC1.62□□□□□ -2.15
TRIM47Q96LD4 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.62□□□□□ -2.15
TRIM47Q96LD4 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.61□□□□□ -2.15
TRIM47Q96LD4 RNU7-154P-201ENST00000516194 62 ntBASIC1.61□□□□□ -2.15
TRIM47Q96LD4 SNORD115-25-201ENST00000362619 82 ntBASIC1.6□□□□□ -2.15
TRIM47Q96LD4 RNU7-151P-201ENST00000516930 53 ntBASIC1.6□□□□□ -2.15
TRIM47Q96LD4 PVT1_3.1-201ENST00000620853 95 ntBASIC1.6□□□□□ -2.15
TRIM47Q96LD4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
TRIM47Q96LD4 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
TRIM47Q96LD4 MIR520E-201ENST00000384867 87 ntBASIC1.59□□□□□ -2.15
TRIM47Q96LD4 SNORD12-201ENST00000391002 90 ntBASIC1.59□□□□□ -2.15
TRIM47Q96LD4 RNA5SP227-201ENST00000516184 113 ntBASIC1.59□□□□□ -2.15
TRIM47Q96LD4 RNA5SP61-201ENST00000516453 100 ntBASIC1.59□□□□□ -2.15
TRIM47Q96LD4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.59□□□□□ -2.15
TRIM47Q96LD4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.59□□□□□ -2.15
TRIM47Q96LD4 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.59□□□□□ -2.15
TRIM47Q96LD4 MIR6828-201ENST00000636181 60 ntBASIC1.59□□□□□ -2.15
TRIM47Q96LD4 SNORD114-27-201ENST00000363766 70 ntBASIC1.58□□□□□ -2.16
TRIM47Q96LD4 RNU6-1204P-201ENST00000363948 107 ntBASIC1.58□□□□□ -2.16
TRIM47Q96LD4 AC002429.1-201ENST00000437672 148 ntBASIC1.58□□□□□ -2.16
TRIM47Q96LD4 MIR3612-201ENST00000579753 87 ntBASIC1.58□□□□□ -2.16
TRIM47Q96LD4 AC025627.3-201ENST00000582078 182 ntBASIC1.58□□□□□ -2.16
TRIM47Q96LD4 U2.18-201ENST00000622185 84 ntBASIC1.58□□□□□ -2.16
TRIM47Q96LD4 RNU6-598P-201ENST00000364017 105 ntBASIC1.57□□□□□ -2.16
TRIM47Q96LD4 MIR598-201ENST00000384868 97 ntBASIC1.57□□□□□ -2.16
TRIM47Q96LD4 MIR329-2-201ENST00000385029 84 ntBASIC1.57□□□□□ -2.16
TRIM47Q96LD4 RNU6-337P-201ENST00000391243 106 ntBASIC1.57□□□□□ -2.16
TRIM47Q96LD4 RPS29P1-201ENST00000465274 159 ntBASIC1.57□□□□□ -2.16
TRIM47Q96LD4 RNU6-822P-201ENST00000362707 106 ntBASIC1.56□□□□□ -2.16
TRIM47Q96LD4 MIR573-201ENST00000384964 99 ntBASIC1.56□□□□□ -2.16
TRIM47Q96LD4 MIR222-201ENST00000384992 110 ntBASIC1.56□□□□□ -2.16
TRIM47Q96LD4 AC098934.3-201ENST00000430450 190 ntBASIC1.56□□□□□ -2.16
TRIM47Q96LD4 AC244090.1-201ENST00000441884 93 ntBASIC1.55□□□□□ -2.16
TRIM47Q96LD4 AL451105.1-201ENST00000450005 189 ntBASIC1.55□□□□□ -2.16
TRIM47Q96LD4 MIR3660-201ENST00000584845 100 ntBASIC1.55□□□□□ -2.16
TRIM47Q96LD4 MIR151B-201ENST00000584249 96 ntBASIC1.54□□□□□ -2.16
TRIM47Q96LD4 MIR6773-201ENST00000612812 74 ntBASIC1.54□□□□□ -2.16
TRIM47Q96LD4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TRIM47Q96LD4 MIR20A-201ENST00000362279 71 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 RNU6-828P-201ENST00000364876 107 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 RNU6-721P-201ENST00000410155 105 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 RNA5SP470-201ENST00000516463 106 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 SNORA70.25-201ENST00000612741 95 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 MIR6788-201ENST00000618842 66 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 MIR6767-201ENST00000637302 66 ntBASIC1.53□□□□□ -2.16
TRIM47Q96LD4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.17
TRIM47Q96LD4 SNORA36.1-201ENST00000363424 132 ntBASIC1.51□□□□□ -2.17
TRIM47Q96LD4 RNU6-742P-201ENST00000365289 107 ntBASIC1.51□□□□□ -2.17
TRIM47Q96LD4 MIR7974-201ENST00000615835 79 ntBASIC1.51□□□□□ -2.17
TRIM47Q96LD4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
TRIM47Q96LD4 SNORD26-201ENST00000384147 75 ntBASIC1.5□□□□□ -2.17
TRIM47Q96LD4 RNU6-1008P-201ENST00000384160 104 ntBASIC1.5□□□□□ -2.17
TRIM47Q96LD4 MIR548J-201ENST00000408833 112 ntBASIC1.5□□□□□ -2.17
TRIM47Q96LD4 HMGN2P22-201ENST00000427588 175 ntBASIC1.5□□□□□ -2.17
TRIM47Q96LD4 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
TRIM47Q96LD4 RNA5SP268-201ENST00000516828 124 ntBASIC1.5□□□□□ -2.17
TRIM47Q96LD4 RNU6-945P-201ENST00000383947 107 ntBASIC1.49□□□□□ -2.17
TRIM47Q96LD4 MIR125B1-201ENST00000385236 88 ntBASIC1.49□□□□□ -2.17
TRIM47Q96LD4 RNU6-995P-201ENST00000391244 107 ntBASIC1.49□□□□□ -2.17
TRIM47Q96LD4 FABP5P4-201ENST00000437203 171 ntBASIC1.49□□□□□ -2.17
TRIM47Q96LD4 MIR7107-201ENST00000611489 80 ntBASIC1.49□□□□□ -2.17
TRIM47Q96LD4 RNY1P8-201ENST00000383970 114 ntBASIC1.48□□□□□ -2.17
TRIM47Q96LD4 RNU6-955P-201ENST00000410497 104 ntBASIC1.48□□□□□ -2.17
TRIM47Q96LD4 SNORD2-201ENST00000459163 69 ntBASIC1.48□□□□□ -2.17
TRIM47Q96LD4 MIR4752-201ENST00000579672 72 ntBASIC1.48□□□□□ -2.17
TRIM47Q96LD4 AC138207.3-201ENST00000585289 166 ntBASIC1.48□□□□□ -2.17
TRIM47Q96LD4 MIRLET7B-201ENST00000385140 83 ntBASIC1.47□□□□□ -2.17
TRIM47Q96LD4 SNORA49-201ENST00000386157 136 ntBASIC1.47□□□□□ -2.17
TRIM47Q96LD4 AC068338.1-201ENST00000565567 176 ntBASIC1.47□□□□□ -2.17
TRIM47Q96LD4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms