Protein–RNA interactions for Protein: Q96JC1

VPS39, Vam6/Vps39-like protein, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS39Q96JC1 SNORD22.1-201ENST00000516331 125 ntBASIC-0.79□□□□□ -2.54
VPS39Q96JC1 MIR4796-201ENST00000580742 81 ntBASIC-0.79□□□□□ -2.54
VPS39Q96JC1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.79□□□□□ -2.54
VPS39Q96JC1 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.8□□□□□ -2.54
VPS39Q96JC1 RNU6-260P-201ENST00000384092 107 ntBASIC-0.8□□□□□ -2.54
VPS39Q96JC1 RNA5SP25-201ENST00000410815 110 ntBASIC-0.8□□□□□ -2.54
VPS39Q96JC1 snoR1.1-201ENST00000628177 80 ntBASIC-0.8□□□□□ -2.54
VPS39Q96JC1 U6.96-201ENST00000636425 70 ntBASIC-0.8□□□□□ -2.54
VPS39Q96JC1 SNORD115-23-201ENST00000364461 82 ntBASIC-0.81□□□□□ -2.54
VPS39Q96JC1 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.81□□□□□ -2.54
VPS39Q96JC1 MIR518B-201ENST00000385127 83 ntBASIC-0.81□□□□□ -2.54
VPS39Q96JC1 AC006254.2-201ENST00000603259 279 ntBASIC-0.81□□□□□ -2.54
VPS39Q96JC1 SNORD115-27-201ENST00000364430 82 ntBASIC-0.82□□□□□ -2.54
VPS39Q96JC1 RNU6-589P-201ENST00000516485 107 ntBASIC-0.82□□□□□ -2.54
VPS39Q96JC1 MIR3179-1-201ENST00000578940 84 ntBASIC-0.82□□□□□ -2.54
VPS39Q96JC1 MIR3179-2-201ENST00000579107 84 ntBASIC-0.82□□□□□ -2.54
VPS39Q96JC1 MIR3179-3-201ENST00000579566 84 ntBASIC-0.82□□□□□ -2.54
VPS39Q96JC1 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.82□□□□□ -2.54
VPS39Q96JC1 MIR6509-201ENST00000614603 85 ntBASIC-0.82□□□□□ -2.54
VPS39Q96JC1 MIR3179-4-201ENST00000617599 84 ntBASIC-0.82□□□□□ -2.54
VPS39Q96JC1 RNU5F-1-201ENST00000362507 117 ntBASIC-0.83□□□□□ -2.54
VPS39Q96JC1 SNORD95.1-201ENST00000364099 68 ntBASIC-0.83□□□□□ -2.54
VPS39Q96JC1 MIR6086-201ENST00000638065 55 ntBASIC-0.83□□□□□ -2.54
VPS39Q96JC1 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.84□□□□□ -2.54
VPS39Q96JC1 RNU6-22P-201ENST00000384355 107 ntBASIC-0.84□□□□□ -2.54
VPS39Q96JC1 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.84□□□□□ -2.54
VPS39Q96JC1 MIR548M-201ENST00000408260 86 ntBASIC-0.84□□□□□ -2.54
VPS39Q96JC1 AC021146.6-201ENST00000514659 117 ntBASIC-0.84□□□□□ -2.54
VPS39Q96JC1 MIR3657-201ENST00000584818 117 ntBASIC-0.84□□□□□ -2.54
VPS39Q96JC1 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.85□□□□□ -2.55
VPS39Q96JC1 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.85□□□□□ -2.55
VPS39Q96JC1 SNORA33.1-201ENST00000364957 130 ntBASIC-0.85□□□□□ -2.55
VPS39Q96JC1 MIR1236-201ENST00000408340 102 ntBASIC-0.85□□□□□ -2.55
VPS39Q96JC1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.85□□□□□ -2.55
VPS39Q96JC1 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.85□□□□□ -2.55
VPS39Q96JC1 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.85□□□□□ -2.55
VPS39Q96JC1 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.86□□□□□ -2.55
VPS39Q96JC1 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.86□□□□□ -2.55
VPS39Q96JC1 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.86□□□□□ -2.55
VPS39Q96JC1 AP000533.3-201ENST00000447704 118 ntBASIC-0.86□□□□□ -2.55
VPS39Q96JC1 AL691482.2-201ENST00000457453 84 ntBASIC-0.86□□□□□ -2.55
VPS39Q96JC1 RNU6-881P-201ENST00000516813 102 ntBASIC-0.86□□□□□ -2.55
VPS39Q96JC1 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.86□□□□□ -2.55
VPS39Q96JC1 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.87□□□□□ -2.55
VPS39Q96JC1 MIR517B-201ENST00000385102 67 ntBASIC-0.87□□□□□ -2.55
VPS39Q96JC1 RNU4-63P-201ENST00000411313 118 ntBASIC-0.87□□□□□ -2.55
VPS39Q96JC1 YWHAEP3-201ENST00000582767 121 ntBASIC-0.87□□□□□ -2.55
VPS39Q96JC1 U6.81-201ENST00000612550 106 ntBASIC-0.87□□□□□ -2.55
VPS39Q96JC1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.87□□□□□ -2.55
VPS39Q96JC1 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.88□□□□□ -2.55
VPS39Q96JC1 RNU6-208P-201ENST00000362431 107 ntBASIC-0.88□□□□□ -2.55
VPS39Q96JC1 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.88□□□□□ -2.55
VPS39Q96JC1 MIR124-2-201ENST00000385081 109 ntBASIC-0.88□□□□□ -2.55
VPS39Q96JC1 MT-TQ-201ENST00000387372 72 ntBASIC-0.88□□□□□ -2.55
VPS39Q96JC1 AC022137.1-201ENST00000483735 151 ntBASIC-0.88□□□□□ -2.55
VPS39Q96JC1 MIR450A1-201ENST00000362262 91 ntBASIC-0.89□□□□□ -2.55
VPS39Q96JC1 RNU6-766P-201ENST00000362478 107 ntBASIC-0.89□□□□□ -2.55
VPS39Q96JC1 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.89□□□□□ -2.55
VPS39Q96JC1 SNORA2.1-201ENST00000363089 137 ntBASIC-0.9□□□□□ -2.55
VPS39Q96JC1 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.9□□□□□ -2.55
VPS39Q96JC1 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.9□□□□□ -2.55
VPS39Q96JC1 MTATP8P2-201ENST00000435212 202 ntBASIC-0.9□□□□□ -2.55
VPS39Q96JC1 RNU6-274P-201ENST00000459566 107 ntBASIC-0.9□□□□□ -2.55
VPS39Q96JC1 MIR3681-201ENST00000580089 72 ntBASIC-0.9□□□□□ -2.55
VPS39Q96JC1 MIR4464-201ENST00000580818 92 ntBASIC-0.9□□□□□ -2.55
VPS39Q96JC1 AL353803.5-201ENST00000599815 141 ntBASIC-0.9□□□□□ -2.55
VPS39Q96JC1 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.91□□□□□ -2.56
VPS39Q96JC1 SNORD114-15-201ENST00000364687 72 ntBASIC-0.91□□□□□ -2.56
VPS39Q96JC1 MIR196A1-201ENST00000388006 70 ntBASIC-0.91□□□□□ -2.56
VPS39Q96JC1 MIR1255B2-201ENST00000408618 67 ntBASIC-0.91□□□□□ -2.56
VPS39Q96JC1 SNORA13-201ENST00000458790 133 ntBASIC-0.91□□□□□ -2.56
VPS39Q96JC1 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.92□□□□□ -2.56
VPS39Q96JC1 AL450471.1-201ENST00000447509 127 ntBASIC-0.92□□□□□ -2.56
VPS39Q96JC1 SNORD18.2-201ENST00000459604 70 ntBASIC-0.92□□□□□ -2.56
VPS39Q96JC1 CYP3A54P-201ENST00000566950 75 ntBASIC-0.92□□□□□ -2.56
VPS39Q96JC1 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.93□□□□□ -2.56
VPS39Q96JC1 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.93□□□□□ -2.56
VPS39Q96JC1 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.93□□□□□ -2.56
VPS39Q96JC1 MIR3910-1-201ENST00000580936 111 ntBASIC-0.93□□□□□ -2.56
VPS39Q96JC1 SNORD114-25-201ENST00000363742 72 ntBASIC-0.94□□□□□ -2.56
VPS39Q96JC1 SNORD74.6-201ENST00000364796 70 ntBASIC-0.94□□□□□ -2.56
VPS39Q96JC1 MIR519C-201ENST00000385053 87 ntBASIC-0.94□□□□□ -2.56
VPS39Q96JC1 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.94□□□□□ -2.56
VPS39Q96JC1 AL500527.2-201ENST00000454105 95 ntBASIC-0.94□□□□□ -2.56
VPS39Q96JC1 RNA5SP476-201ENST00000516613 103 ntBASIC-0.94□□□□□ -2.56
VPS39Q96JC1 MIR6888-201ENST00000621977 67 ntBASIC-0.94□□□□□ -2.56
VPS39Q96JC1 RNU6-834P-201ENST00000362367 110 ntBASIC-0.95□□□□□ -2.56
VPS39Q96JC1 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.95□□□□□ -2.56
VPS39Q96JC1 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.95□□□□□ -2.56
VPS39Q96JC1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.95□□□□□ -2.56
VPS39Q96JC1 RNY4P18-201ENST00000391107 89 ntBASIC-0.95□□□□□ -2.56
VPS39Q96JC1 AL031737.1-201ENST00000450125 223 ntBASIC-0.95□□□□□ -2.56
VPS39Q96JC1 RNU6-313P-201ENST00000516317 112 ntBASIC-0.95□□□□□ -2.56
VPS39Q96JC1 RNU6-340P-201ENST00000364005 107 ntBASIC-0.96□□□□□ -2.56
VPS39Q96JC1 RNY1P7-201ENST00000384743 110 ntBASIC-0.96□□□□□ -2.56
VPS39Q96JC1 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.96□□□□□ -2.56
VPS39Q96JC1 RNU6-479P-201ENST00000516348 105 ntBASIC-0.96□□□□□ -2.56
VPS39Q96JC1 SNORA62.4-201ENST00000365504 151 ntBASIC-0.97□□□□□ -2.56
VPS39Q96JC1 MIR4668-201ENST00000582284 70 ntBASIC-0.97□□□□□ -2.56
VPS39Q96JC1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.97□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 208.6 ms