Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU4-11P-201ENST00000365287 132 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 RNU6-1283P-201ENST00000365314 105 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 RNU6-246P-201ENST00000384702 107 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 MIR1255B2-201ENST00000408618 67 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 RNU6-656P-201ENST00000516785 107 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.162-201ENST00000363683 102 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 MIR548P-201ENST00000408336 84 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 RNU4-88P-201ENST00000411220 86 ntBASIC-0.4□□□□□ -2.47
SYNE1Q8NF91 RNU6-630P-201ENST00000391258 106 ntBASIC-0.41□□□□□ -2.47
SYNE1Q8NF91 RNU7-6P-201ENST00000516845 62 ntBASIC-0.41□□□□□ -2.47
SYNE1Q8NF91 RNU6-774P-201ENST00000363238 107 ntBASIC-0.41□□□□□ -2.47
SYNE1Q8NF91 U7.2-201ENST00000607576 63 ntBASIC-0.41□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.41□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.103-201ENST00000363171 102 ntBASIC-0.41□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.158-201ENST00000363651 101 ntBASIC-0.41□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.163-201ENST00000363702 113 ntBASIC-0.41□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.41□□□□□ -2.47
SYNE1Q8NF91 RNU6-813P-201ENST00000384691 107 ntBASIC-0.41□□□□□ -2.47
SYNE1Q8NF91 RNU6-918P-201ENST00000391219 106 ntBASIC-0.41□□□□□ -2.47
SYNE1Q8NF91 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.41□□□□□ -2.47
SYNE1Q8NF91 Y_RNA.662-201ENST00000516028 97 ntBASIC-0.41□□□□□ -2.47
SYNE1Q8NF91 MIR1255B1-201ENST00000636325 63 ntBASIC-0.41□□□□□ -2.47
SYNE1Q8NF91 U7.5-201ENST00000517224 61 ntBASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 AC006254.2-201ENST00000603259 279 ntBASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 AL035470.1-201ENST00000622571 220 ntBASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 RNU6-363P-201ENST00000362895 105 ntBASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.138-201ENST00000363462 102 ntBASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 RNU6-616P-201ENST00000384353 107 ntBASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 SNORD58.1-201ENST00000391313 66 ntBASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 RNU6-65P-201ENST00000516332 98 ntBASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 MIR4777-201ENST00000583710 86 ntBASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 RNA5SP26-201ENST00000362406 119 ntBASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 RNU6-978P-201ENST00000364371 103 ntBASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 MIR548F4-201ENST00000408515 105 ntBASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 MIR3121-201ENST00000579680 77 ntBASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 MIR34C-201ENST00000384831 77 ntBASIC-0.41□□□□□ -2.48
SYNE1Q8NF91 RNY4P9-201ENST00000363194 97 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 SNORD45B-201ENST00000364617 72 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.511-201ENST00000384514 103 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 MIR1263-201ENST00000408324 86 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 MIR3171-201ENST00000584270 74 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 RNU6-806P-201ENST00000365147 105 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 RNU6-239P-201ENST00000390990 99 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 RNU6-1061P-201ENST00000516530 99 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 SNORD116-18-201ENST00000383961 92 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 MTND5P22-201ENST00000458380 195 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 SNORA18.5-201ENST00000516616 101 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 MIR6509-201ENST00000614603 85 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 SNORA33.2-201ENST00000365413 134 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 RNU6-129P-201ENST00000391022 107 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 RNA5SP136-201ENST00000410906 107 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 RNU7-88P-201ENST00000458752 63 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 RNU6-132P-201ENST00000383863 107 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 AL035461.1-201ENST00000421490 332 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 RNU6-752P-201ENST00000516376 102 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.397-201ENST00000383950 98 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.42□□□□□ -2.48
SYNE1Q8NF91 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.420-201ENST00000384043 110 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 RNU6-746P-201ENST00000384112 109 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 MIR4694-201ENST00000578534 80 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 RNU6-644P-201ENST00000391155 98 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 CYP3A54P-201ENST00000566950 75 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 RNU6-1034P-201ENST00000365335 101 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.431-201ENST00000384086 102 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 AL691482.2-201ENST00000457453 84 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 U6.81-201ENST00000612550 106 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.501-201ENST00000384467 103 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 RNU6-1160P-201ENST00000384546 104 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 AL078595.1-201ENST00000404458 226 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.59-201ENST00000362828 102 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 RNU7-61P-201ENST00000515897 61 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 MIR548S-201ENST00000581352 82 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 RNU6-841P-201ENST00000383872 107 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 RNU6-639P-201ENST00000384074 107 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 MIR548D2-201ENST00000384955 97 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 SNORD115-22-201ENST00000364456 82 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 RNU6-537P-201ENST00000517277 103 ntBASIC-0.43□□□□□ -2.48
SYNE1Q8NF91 AL157777.2-201ENST00000258070 137 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.144-201ENST00000363521 113 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.272-201ENST00000364696 102 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 MTND4LP1-201ENST00000446263 157 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 RNU6-772P-201ENST00000516042 105 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 U6atac.1-201ENST00000616025 117 ntBASIC-0.44□□□□□ -2.48
SYNE1Q8NF91 Y_RNA.175-201ENST00000363794 111 ntBASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 224.4 ms