Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RNA5SP255-201ENST00000516370 107 ntBASIC1.52□□□□□ -2.17
SCUBE3Q8IX30 RNU6-231P-201ENST00000517122 103 ntBASIC1.52□□□□□ -2.17
SCUBE3Q8IX30 MIR6515-201ENST00000619843 57 ntBASIC1.52□□□□□ -2.17
SCUBE3Q8IX30 Y_RNA.74-201ENST00000362911 99 ntBASIC1.51□□□□□ -2.17
SCUBE3Q8IX30 AC243829.6-201ENST00000612652 106 ntBASIC1.51□□□□□ -2.17
SCUBE3Q8IX30 RNU6-1246P-201ENST00000391064 107 ntBASIC1.5□□□□□ -2.17
SCUBE3Q8IX30 SNORD99-201ENST00000408612 74 ntBASIC1.5□□□□□ -2.17
SCUBE3Q8IX30 MIR7107-201ENST00000611489 80 ntBASIC1.5□□□□□ -2.17
SCUBE3Q8IX30 AL353770.2-201ENST00000620024 78 ntBASIC1.5□□□□□ -2.17
SCUBE3Q8IX30 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
SCUBE3Q8IX30 RNU6-518P-201ENST00000516056 96 ntBASIC1.49□□□□□ -2.17
SCUBE3Q8IX30 RNA5SP94-201ENST00000516917 108 ntBASIC1.49□□□□□ -2.17
SCUBE3Q8IX30 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SCUBE3Q8IX30 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SCUBE3Q8IX30 SNORD26-201ENST00000384147 75 ntBASIC1.48□□□□□ -2.17
SCUBE3Q8IX30 MIR618-201ENST00000385287 98 ntBASIC1.48□□□□□ -2.17
SCUBE3Q8IX30 MIR6078-201ENST00000611069 100 ntBASIC1.48□□□□□ -2.17
SCUBE3Q8IX30 SNORD116-16-201ENST00000384533 92 ntBASIC1.47□□□□□ -2.17
SCUBE3Q8IX30 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
SCUBE3Q8IX30 AC244090.1-201ENST00000441884 93 ntBASIC1.47□□□□□ -2.17
SCUBE3Q8IX30 RNU6-980P-201ENST00000516925 103 ntBASIC1.47□□□□□ -2.17
SCUBE3Q8IX30 SNORA70.25-201ENST00000612741 95 ntBASIC1.47□□□□□ -2.17
SCUBE3Q8IX30 PVT1_3.1-201ENST00000620853 95 ntBASIC1.47□□□□□ -2.17
SCUBE3Q8IX30 MIR20A-201ENST00000362279 71 ntBASIC1.46□□□□□ -2.18
SCUBE3Q8IX30 RNU1-124P-201ENST00000363861 145 ntBASIC1.46□□□□□ -2.18
SCUBE3Q8IX30 MIR519A2-201ENST00000384990 87 ntBASIC1.45□□□□□ -2.18
SCUBE3Q8IX30 MIR527-201ENST00000385244 85 ntBASIC1.45□□□□□ -2.18
SCUBE3Q8IX30 SNORD116.2-201ENST00000391251 93 ntBASIC1.45□□□□□ -2.18
SCUBE3Q8IX30 MIR1255B2-201ENST00000408618 67 ntBASIC1.45□□□□□ -2.18
SCUBE3Q8IX30 RNA5SP61-201ENST00000516453 100 ntBASIC1.45□□□□□ -2.18
SCUBE3Q8IX30 RNA5SP404-201ENST00000517118 132 ntBASIC1.45□□□□□ -2.18
SCUBE3Q8IX30 AC090617.8-201ENST00000623339 167 ntBASIC1.45□□□□□ -2.18
SCUBE3Q8IX30 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.44□□□□□ -2.18
SCUBE3Q8IX30 MIR7110-201ENST00000612638 86 ntBASIC1.44□□□□□ -2.18
SCUBE3Q8IX30 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.43□□□□□ -2.18
SCUBE3Q8IX30 Y_RNA.282-201ENST00000364793 102 ntBASIC1.43□□□□□ -2.18
SCUBE3Q8IX30 MIR598-201ENST00000384868 97 ntBASIC1.43□□□□□ -2.18
SCUBE3Q8IX30 HMGN2P22-201ENST00000427588 175 ntBASIC1.43□□□□□ -2.18
SCUBE3Q8IX30 MIR4752-201ENST00000579672 72 ntBASIC1.43□□□□□ -2.18
SCUBE3Q8IX30 MIR5706-201ENST00000579841 80 ntBASIC1.43□□□□□ -2.18
SCUBE3Q8IX30 AC243829.3-201ENST00000622177 108 ntBASIC1.43□□□□□ -2.18
SCUBE3Q8IX30 SNORD2-201ENST00000459163 69 ntBASIC1.42□□□□□ -2.18
SCUBE3Q8IX30 RNU6-1223P-201ENST00000517124 104 ntBASIC1.42□□□□□ -2.18
SCUBE3Q8IX30 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.42□□□□□ -2.18
SCUBE3Q8IX30 RNU1-93P-201ENST00000364704 169 ntBASIC1.41□□□□□ -2.18
SCUBE3Q8IX30 MIR96-201ENST00000362288 78 ntBASIC1.4□□□□□ -2.19
SCUBE3Q8IX30 RNU4-33P-201ENST00000364316 85 ntBASIC1.4□□□□□ -2.19
SCUBE3Q8IX30 RNA5SP222-201ENST00000411039 105 ntBASIC1.4□□□□□ -2.19
SCUBE3Q8IX30 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
SCUBE3Q8IX30 SNORA40.16-201ENST00000517238 121 ntBASIC1.39□□□□□ -2.19
SCUBE3Q8IX30 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.38□□□□□ -2.19
SCUBE3Q8IX30 RPS29P23-201ENST00000458635 123 ntBASIC1.38□□□□□ -2.19
SCUBE3Q8IX30 MIR26B-201ENST00000362251 77 ntBASIC1.37□□□□□ -2.19
SCUBE3Q8IX30 Y_RNA.374-201ENST00000365606 101 ntBASIC1.37□□□□□ -2.19
SCUBE3Q8IX30 MIR150-201ENST00000385048 84 ntBASIC1.37□□□□□ -2.19
SCUBE3Q8IX30 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.37□□□□□ -2.19
SCUBE3Q8IX30 MIR151B-201ENST00000584249 96 ntBASIC1.37□□□□□ -2.19
SCUBE3Q8IX30 MIR6788-201ENST00000618842 66 ntBASIC1.37□□□□□ -2.19
SCUBE3Q8IX30 AC068338.1-201ENST00000565567 176 ntBASIC1.36□□□□□ -2.19
SCUBE3Q8IX30 SNORD114-29-201ENST00000364819 70 ntBASIC1.35□□□□□ -2.19
SCUBE3Q8IX30 RNU6-246P-201ENST00000384702 107 ntBASIC1.35□□□□□ -2.19
SCUBE3Q8IX30 MIR520E-201ENST00000384867 87 ntBASIC1.35□□□□□ -2.19
SCUBE3Q8IX30 RNU6-337P-201ENST00000391243 106 ntBASIC1.35□□□□□ -2.19
SCUBE3Q8IX30 AC069271.1-201ENST00000445577 156 ntBASIC1.35□□□□□ -2.19
SCUBE3Q8IX30 MIR548X-201ENST00000580069 75 ntBASIC1.35□□□□□ -2.19
SCUBE3Q8IX30 RNU1-29P-201ENST00000606574 126 ntBASIC1.35□□□□□ -2.19
SCUBE3Q8IX30 MIR7974-201ENST00000615835 79 ntBASIC1.35□□□□□ -2.19
SCUBE3Q8IX30 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.35□□□□□ -2.19
SCUBE3Q8IX30 RNU6-35P-201ENST00000384530 107 ntBASIC1.34□□□□□ -2.19
SCUBE3Q8IX30 SNORA40B-201ENST00000385573 128 ntBASIC1.33□□□□□ -2.2
SCUBE3Q8IX30 RPS29P1-201ENST00000465274 159 ntBASIC1.33□□□□□ -2.2
SCUBE3Q8IX30 RNA5SP470-201ENST00000516463 106 ntBASIC1.33□□□□□ -2.2
SCUBE3Q8IX30 MIR3660-201ENST00000584845 100 ntBASIC1.33□□□□□ -2.2
SCUBE3Q8IX30 RNA5SP517-201ENST00000364724 117 ntBASIC1.32□□□□□ -2.2
SCUBE3Q8IX30 RNU7-154P-201ENST00000516194 62 ntBASIC1.32□□□□□ -2.2
SCUBE3Q8IX30 AL353765.1-201ENST00000605514 183 ntBASIC1.32□□□□□ -2.2
SCUBE3Q8IX30 U7.6-201ENST00000610841 64 ntBASIC1.32□□□□□ -2.2
SCUBE3Q8IX30 MIR6773-201ENST00000612812 74 ntBASIC1.32□□□□□ -2.2
SCUBE3Q8IX30 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
SCUBE3Q8IX30 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SCUBE3Q8IX30 SNORD115-25-201ENST00000362619 82 ntBASIC1.31□□□□□ -2.2
SCUBE3Q8IX30 RNU6-810P-201ENST00000364001 107 ntBASIC1.31□□□□□ -2.2
SCUBE3Q8IX30 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SCUBE3Q8IX30 RNU6-930P-201ENST00000390938 100 ntBASIC1.31□□□□□ -2.2
SCUBE3Q8IX30 MIR548J-201ENST00000408833 112 ntBASIC1.3□□□□□ -2.2
SCUBE3Q8IX30 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.3□□□□□ -2.2
SCUBE3Q8IX30 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.3□□□□□ -2.2
SCUBE3Q8IX30 SNORA2A-201ENST00000383885 135 ntBASIC1.29□□□□□ -2.2
SCUBE3Q8IX30 MIR548AG1-201ENST00000579932 66 ntBASIC1.29□□□□□ -2.2
SCUBE3Q8IX30 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.28□□□□□ -2.2
SCUBE3Q8IX30 Y_RNA.109-201ENST00000363215 102 ntBASIC1.28□□□□□ -2.2
SCUBE3Q8IX30 RNY1P8-201ENST00000383970 114 ntBASIC1.28□□□□□ -2.2
SCUBE3Q8IX30 SNORA36.2-201ENST00000384004 127 ntBASIC1.28□□□□□ -2.2
SCUBE3Q8IX30 RNU6-172P-201ENST00000411000 93 ntBASIC1.28□□□□□ -2.2
SCUBE3Q8IX30 RNU6-229P-201ENST00000516614 102 ntBASIC1.28□□□□□ -2.2
SCUBE3Q8IX30 MIR429-201ENST00000362106 83 ntBASIC1.27□□□□□ -2.21
SCUBE3Q8IX30 SNORD1B-201ENST00000363091 84 ntBASIC1.27□□□□□ -2.21
SCUBE3Q8IX30 RNU7-188P-201ENST00000517063 64 ntBASIC1.27□□□□□ -2.21
SCUBE3Q8IX30 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.26□□□□□ -2.21
SCUBE3Q8IX30 SNORA49-201ENST00000386157 136 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 170.6 ms