Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 RNA5SP66-201ENST00000517178 101 ntBASIC-0.47□□□□□ -2.48
CCDC71Q8IV32 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.48□□□□□ -2.49
CCDC71Q8IV32 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.48□□□□□ -2.49
CCDC71Q8IV32 SNORD75.2-201ENST00000408784 58 ntBASIC-0.48□□□□□ -2.49
CCDC71Q8IV32 RNU7-55P-201ENST00000459426 62 ntBASIC-0.48□□□□□ -2.49
CCDC71Q8IV32 SNORA40.17-201ENST00000517256 115 ntBASIC-0.48□□□□□ -2.49
CCDC71Q8IV32 MIR4436A-201ENST00000585278 85 ntBASIC-0.48□□□□□ -2.49
CCDC71Q8IV32 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 RNU2-51P-201ENST00000410708 197 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 RNA5SP461-201ENST00000516451 104 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 RNU6-158P-201ENST00000517104 100 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 MIR3115-201ENST00000577915 68 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 U4.2-201ENST00000618561 85 ntBASIC-0.49□□□□□ -2.49
CCDC71Q8IV32 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.5□□□□□ -2.49
CCDC71Q8IV32 SNORD90-201ENST00000391145 111 ntBASIC-0.5□□□□□ -2.49
CCDC71Q8IV32 AL603908.1-201ENST00000406098 201 ntBASIC-0.5□□□□□ -2.49
CCDC71Q8IV32 U7.3-201ENST00000616123 62 ntBASIC-0.5□□□□□ -2.49
CCDC71Q8IV32 SNX3P1X-201ENST00000414887 175 ntBASIC-0.51□□□□□ -2.49
CCDC71Q8IV32 RNU6-502P-201ENST00000362419 108 ntBASIC-0.52□□□□□ -2.49
CCDC71Q8IV32 SNORD114-11-201ENST00000363738 75 ntBASIC-0.52□□□□□ -2.49
CCDC71Q8IV32 MIR1236-201ENST00000408340 102 ntBASIC-0.52□□□□□ -2.49
CCDC71Q8IV32 MIR4432-201ENST00000581823 84 ntBASIC-0.52□□□□□ -2.49
CCDC71Q8IV32 AC006254.2-201ENST00000603259 279 ntBASIC-0.52□□□□□ -2.49
CCDC71Q8IV32 RNU5F-1-201ENST00000362507 117 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 SNORA63.6-201ENST00000364921 119 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 MIR601-201ENST00000385256 79 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 MTATP8P2-201ENST00000435212 202 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 AC097510.1-201ENST00000510945 133 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 RNU6-162P-201ENST00000516228 103 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 MIR2052-201ENST00000636055 55 ntBASIC-0.53□□□□□ -2.49
CCDC71Q8IV32 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 RNU6-901P-201ENST00000384593 106 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 MIR196A1-201ENST00000388006 70 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 AL031737.1-201ENST00000450125 223 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 AC114755.3-201ENST00000481111 251 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 MIR4796-201ENST00000580742 81 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 AC093726.3-201ENST00000637588 150 ntBASIC-0.54□□□□□ -2.5
CCDC71Q8IV32 RNU6-24P-201ENST00000384440 107 ntBASIC-0.55□□□□□ -2.5
CCDC71Q8IV32 SNORD56B-201ENST00000384713 71 ntBASIC-0.55□□□□□ -2.5
CCDC71Q8IV32 snoU13.13-201ENST00000458842 104 ntBASIC-0.55□□□□□ -2.5
CCDC71Q8IV32 MIR4280-201ENST00000582178 76 ntBASIC-0.55□□□□□ -2.5
CCDC71Q8IV32 SNORD114-14-201ENST00000362723 75 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 RNU6-973P-201ENST00000364690 107 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 RNU6-382P-201ENST00000365181 106 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 RNY4P18-201ENST00000391107 89 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 snoU13.17-201ENST00000458802 104 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 RNA5SP180-201ENST00000516181 101 ntBASIC-0.56□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.57□□□□□ -2.5
CCDC71Q8IV32 RNU6-990P-201ENST00000364385 104 ntBASIC-0.57□□□□□ -2.5
CCDC71Q8IV32 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.57□□□□□ -2.5
CCDC71Q8IV32 AL606753.1-201ENST00000427435 87 ntBASIC-0.57□□□□□ -2.5
CCDC71Q8IV32 RNA5SP470-201ENST00000516463 106 ntBASIC-0.57□□□□□ -2.5
CCDC71Q8IV32 RNU6-789P-201ENST00000517105 102 ntBASIC-0.57□□□□□ -2.5
CCDC71Q8IV32 MIR6773-201ENST00000612812 74 ntBASIC-0.57□□□□□ -2.5
CCDC71Q8IV32 RNU6-824P-201ENST00000363724 104 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 RNA5SP192-201ENST00000364404 120 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 MIR198-201ENST00000637333 62 ntBASIC-0.58□□□□□ -2.5
CCDC71Q8IV32 RNU6-260P-201ENST00000384092 107 ntBASIC-0.59□□□□□ -2.5
CCDC71Q8IV32 AL445193.1-201ENST00000441183 141 ntBASIC-0.59□□□□□ -2.5
CCDC71Q8IV32 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.59□□□□□ -2.5
CCDC71Q8IV32 MIR4773-1-201ENST00000637203 78 ntBASIC-0.59□□□□□ -2.5
CCDC71Q8IV32 RNU6-755P-201ENST00000364400 103 ntBASIC-0.6□□□□□ -2.51
CCDC71Q8IV32 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.6□□□□□ -2.51
CCDC71Q8IV32 MIR378F-201ENST00000578143 78 ntBASIC-0.6□□□□□ -2.51
CCDC71Q8IV32 MIR6851-201ENST00000617060 67 ntBASIC-0.6□□□□□ -2.51
CCDC71Q8IV32 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.6□□□□□ -2.51
CCDC71Q8IV32 MIR450A1-201ENST00000362262 91 ntBASIC-0.61□□□□□ -2.51
CCDC71Q8IV32 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.61□□□□□ -2.51
CCDC71Q8IV32 RNU6-337P-201ENST00000391243 106 ntBASIC-0.61□□□□□ -2.51
CCDC71Q8IV32 AC021146.9-201ENST00000512503 156 ntBASIC-0.61□□□□□ -2.51
CCDC71Q8IV32 RNU7-153P-201ENST00000516455 62 ntBASIC-0.61□□□□□ -2.51
CCDC71Q8IV32 U6.81-201ENST00000612550 106 ntBASIC-0.61□□□□□ -2.51
CCDC71Q8IV32 MIR519C-201ENST00000385053 87 ntBASIC-0.62□□□□□ -2.51
CCDC71Q8IV32 MIR204-201ENST00000385200 110 ntBASIC-0.62□□□□□ -2.51
CCDC71Q8IV32 SNORD83B-201ENST00000386745 93 ntBASIC-0.62□□□□□ -2.51
CCDC71Q8IV32 SNORA40.13-201ENST00000516379 120 ntBASIC-0.62□□□□□ -2.51
CCDC71Q8IV32 AP001318.4-201ENST00000616637 121 ntBASIC-0.62□□□□□ -2.51
CCDC71Q8IV32 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.62□□□□□ -2.51
CCDC71Q8IV32 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.63□□□□□ -2.51
CCDC71Q8IV32 MIRLET7B-201ENST00000385140 83 ntBASIC-0.63□□□□□ -2.51
CCDC71Q8IV32 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.63□□□□□ -2.51
CCDC71Q8IV32 RNU6-592P-201ENST00000411333 103 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms