Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.88□□□□□ -2.55
HMGCS1Q01581 RNU6-209P-201ENST00000384118 107 ntBASIC-0.88□□□□□ -2.55
HMGCS1Q01581 MIR590-201ENST00000385008 97 ntBASIC-0.88□□□□□ -2.55
HMGCS1Q01581 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.88□□□□□ -2.55
HMGCS1Q01581 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.88□□□□□ -2.55
HMGCS1Q01581 RNA5SP147-201ENST00000516493 109 ntBASIC-0.88□□□□□ -2.55
HMGCS1Q01581 RNA5SP476-201ENST00000516613 103 ntBASIC-0.88□□□□□ -2.55
HMGCS1Q01581 RNU6-537P-201ENST00000517277 103 ntBASIC-0.88□□□□□ -2.55
HMGCS1Q01581 YWHAEP3-201ENST00000582767 121 ntBASIC-0.88□□□□□ -2.55
HMGCS1Q01581 RNU5F-1-201ENST00000362507 117 ntBASIC-0.89□□□□□ -2.55
HMGCS1Q01581 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.89□□□□□ -2.55
HMGCS1Q01581 RNU6-704P-201ENST00000364162 103 ntBASIC-0.89□□□□□ -2.55
HMGCS1Q01581 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.89□□□□□ -2.55
HMGCS1Q01581 MIR196A1-201ENST00000388006 70 ntBASIC-0.89□□□□□ -2.55
HMGCS1Q01581 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.89□□□□□ -2.55
HMGCS1Q01581 RNU7-61P-201ENST00000515897 61 ntBASIC-0.89□□□□□ -2.55
HMGCS1Q01581 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.89□□□□□ -2.55
HMGCS1Q01581 MIR6509-201ENST00000614603 85 ntBASIC-0.9□□□□□ -2.55
HMGCS1Q01581 RNU6-208P-201ENST00000362431 107 ntBASIC-0.91□□□□□ -2.56
HMGCS1Q01581 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.91□□□□□ -2.56
HMGCS1Q01581 SNORD116-10-201ENST00000363791 102 ntBASIC-0.91□□□□□ -2.56
HMGCS1Q01581 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.91□□□□□ -2.56
HMGCS1Q01581 snoU13.19-201ENST00000459148 104 ntBASIC-0.91□□□□□ -2.56
HMGCS1Q01581 MIR4796-201ENST00000580742 81 ntBASIC-0.91□□□□□ -2.56
HMGCS1Q01581 SNORA33.1-201ENST00000364957 130 ntBASIC-0.92□□□□□ -2.56
HMGCS1Q01581 MIR124-2-201ENST00000385081 109 ntBASIC-0.92□□□□□ -2.56
HMGCS1Q01581 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.92□□□□□ -2.56
HMGCS1Q01581 MIR1302-5-201ENST00000408164 150 ntBASIC-0.92□□□□□ -2.56
HMGCS1Q01581 SNORD18.2-201ENST00000459604 70 ntBASIC-0.92□□□□□ -2.56
HMGCS1Q01581 RNU6-162P-201ENST00000516228 103 ntBASIC-0.92□□□□□ -2.56
HMGCS1Q01581 RNU6-109P-201ENST00000516364 107 ntBASIC-0.92□□□□□ -2.56
HMGCS1Q01581 RNU6-184P-201ENST00000516514 107 ntBASIC-0.92□□□□□ -2.56
HMGCS1Q01581 SNORD114-25-201ENST00000363742 72 ntBASIC-0.93□□□□□ -2.56
HMGCS1Q01581 RNU6-959P-201ENST00000384671 107 ntBASIC-0.93□□□□□ -2.56
HMGCS1Q01581 AL691482.2-201ENST00000457453 84 ntBASIC-0.93□□□□□ -2.56
HMGCS1Q01581 MIR3657-201ENST00000584818 117 ntBASIC-0.93□□□□□ -2.56
HMGCS1Q01581 AL353803.5-201ENST00000599815 141 ntBASIC-0.93□□□□□ -2.56
HMGCS1Q01581 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.94□□□□□ -2.56
HMGCS1Q01581 SNORA62.4-201ENST00000365504 151 ntBASIC-0.94□□□□□ -2.56
HMGCS1Q01581 RNU6-30P-201ENST00000384561 107 ntBASIC-0.94□□□□□ -2.56
HMGCS1Q01581 RNU6-554P-201ENST00000410466 106 ntBASIC-0.94□□□□□ -2.56
HMGCS1Q01581 HAR1A.1-201ENST00000459583 118 ntBASIC-0.94□□□□□ -2.56
HMGCS1Q01581 SCARNA17-201ENST00000516183 144 ntBASIC-0.94□□□□□ -2.56
HMGCS1Q01581 RNU7-153P-201ENST00000516455 62 ntBASIC-0.94□□□□□ -2.56
HMGCS1Q01581 MIR4464-201ENST00000580818 92 ntBASIC-0.94□□□□□ -2.56
HMGCS1Q01581 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.94□□□□□ -2.56
HMGCS1Q01581 U7.3-201ENST00000616123 62 ntBASIC-0.94□□□□□ -2.56
HMGCS1Q01581 SNORA2.1-201ENST00000363089 137 ntBASIC-0.95□□□□□ -2.56
HMGCS1Q01581 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.95□□□□□ -2.56
HMGCS1Q01581 RNU6-746P-201ENST00000384112 109 ntBASIC-0.95□□□□□ -2.56
HMGCS1Q01581 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.95□□□□□ -2.56
HMGCS1Q01581 RNU6-106P-201ENST00000384405 107 ntBASIC-0.95□□□□□ -2.56
HMGCS1Q01581 U6.81-201ENST00000612550 106 ntBASIC-0.95□□□□□ -2.56
HMGCS1Q01581 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.96□□□□□ -2.56
HMGCS1Q01581 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.96□□□□□ -2.56
HMGCS1Q01581 SNORA19-201ENST00000384737 128 ntBASIC-0.96□□□□□ -2.56
HMGCS1Q01581 MIR1236-201ENST00000408340 102 ntBASIC-0.96□□□□□ -2.56
HMGCS1Q01581 RNU6-274P-201ENST00000459566 107 ntBASIC-0.96□□□□□ -2.56
HMGCS1Q01581 MIR3671-201ENST00000580455 88 ntBASIC-0.96□□□□□ -2.56
HMGCS1Q01581 AL365222.1-201ENST00000614661 98 ntBASIC-0.96□□□□□ -2.56
HMGCS1Q01581 SNORD83B-201ENST00000386745 93 ntBASIC-0.97□□□□□ -2.56
HMGCS1Q01581 MIR1255B2-201ENST00000408618 67 ntBASIC-0.97□□□□□ -2.56
HMGCS1Q01581 MIR548AX-201ENST00000580117 73 ntBASIC-0.97□□□□□ -2.56
HMGCS1Q01581 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.97□□□□□ -2.56
HMGCS1Q01581 MIR6129-201ENST00000616087 109 ntBASIC-0.97□□□□□ -2.56
HMGCS1Q01581 MIR6888-201ENST00000621977 67 ntBASIC-0.97□□□□□ -2.56
HMGCS1Q01581 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.98□□□□□ -2.57
HMGCS1Q01581 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.98□□□□□ -2.57
HMGCS1Q01581 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.98□□□□□ -2.57
HMGCS1Q01581 AC008267.6-201ENST00000441664 139 ntBASIC-0.98□□□□□ -2.57
HMGCS1Q01581 CYP3A54P-201ENST00000566950 75 ntBASIC-0.98□□□□□ -2.57
HMGCS1Q01581 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.99□□□□□ -2.57
HMGCS1Q01581 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.99□□□□□ -2.57
HMGCS1Q01581 SNORD115-27-201ENST00000364430 82 ntBASIC-1□□□□□ -2.57
HMGCS1Q01581 SNORD114-17-201ENST00000364699 75 ntBASIC-1□□□□□ -2.57
HMGCS1Q01581 RNU6-1246P-201ENST00000391064 107 ntBASIC-1□□□□□ -2.57
HMGCS1Q01581 MIR3668-201ENST00000582138 75 ntBASIC-1□□□□□ -2.57
HMGCS1Q01581 AL445584.3-201ENST00000617173 78 ntBASIC-1□□□□□ -2.57
HMGCS1Q01581 Y_RNA.818-201ENST00000618813 71 ntBASIC-1□□□□□ -2.57
HMGCS1Q01581 RNU6-431P-201ENST00000383874 107 ntBASIC-1.01□□□□□ -2.57
HMGCS1Q01581 SNORD64-201ENST00000386683 67 ntBASIC-1.01□□□□□ -2.57
HMGCS1Q01581 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.01□□□□□ -2.57
HMGCS1Q01581 AL450471.1-201ENST00000447509 127 ntBASIC-1.01□□□□□ -2.57
HMGCS1Q01581 AL500527.2-201ENST00000454105 95 ntBASIC-1.01□□□□□ -2.57
HMGCS1Q01581 RNA5SP470-201ENST00000516463 106 ntBASIC-1.01□□□□□ -2.57
HMGCS1Q01581 RNU6-81P-201ENST00000365608 104 ntBASIC-1.02□□□□□ -2.57
HMGCS1Q01581 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.02□□□□□ -2.57
HMGCS1Q01581 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.03□□□□□ -2.57
HMGCS1Q01581 MIR521-2-201ENST00000384818 87 ntBASIC-1.03□□□□□ -2.57
HMGCS1Q01581 MT-TR-201ENST00000387439 65 ntBASIC-1.03□□□□□ -2.57
HMGCS1Q01581 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.03□□□□□ -2.57
HMGCS1Q01581 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.04□□□□□ -2.58
HMGCS1Q01581 MIR147A-201ENST00000385079 72 ntBASIC-1.04□□□□□ -2.58
HMGCS1Q01581 RNU6-589P-201ENST00000516485 107 ntBASIC-1.04□□□□□ -2.58
HMGCS1Q01581 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.04□□□□□ -2.58
HMGCS1Q01581 RNU6-340P-201ENST00000364005 107 ntBASIC-1.05□□□□□ -2.58
HMGCS1Q01581 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.05□□□□□ -2.58
HMGCS1Q01581 RNU6-766P-201ENST00000362478 107 ntBASIC-1.06□□□□□ -2.58
HMGCS1Q01581 MIR519C-201ENST00000385053 87 ntBASIC-1.06□□□□□ -2.58
HMGCS1Q01581 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 230.1 ms