Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU6-824P-201ENST00000363724 104 ntBASIC-0.39□□□□□ -2.47
PDX1P52945 RNU6-382P-201ENST00000365181 106 ntBASIC-0.39□□□□□ -2.47
PDX1P52945 RNU6-147P-201ENST00000383983 107 ntBASIC-0.39□□□□□ -2.47
PDX1P52945 MIR1236-201ENST00000408340 102 ntBASIC-0.39□□□□□ -2.47
PDX1P52945 RNU7-24P-201ENST00000458867 62 ntBASIC-0.39□□□□□ -2.47
PDX1P52945 AC108676.2-201ENST00000605225 163 ntBASIC-0.39□□□□□ -2.47
PDX1P52945 MALAT1.1-201ENST00000618249 95 ntBASIC-0.39□□□□□ -2.47
PDX1P52945 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.4□□□□□ -2.47
PDX1P52945 SNORA32.3-201ENST00000384772 121 ntBASIC-0.4□□□□□ -2.47
PDX1P52945 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
PDX1P52945 AL035461.1-201ENST00000421490 332 ntBASIC-0.4□□□□□ -2.47
PDX1P52945 SNORA40.13-201ENST00000516379 120 ntBASIC-0.4□□□□□ -2.47
PDX1P52945 RNU6-640P-201ENST00000363693 105 ntBASIC-0.41□□□□□ -2.48
PDX1P52945 SNORA63.6-201ENST00000364921 119 ntBASIC-0.41□□□□□ -2.48
PDX1P52945 RNA5SP169-201ENST00000517268 117 ntBASIC-0.41□□□□□ -2.48
PDX1P52945 AL391099.1-201ENST00000624635 187 ntBASIC-0.41□□□□□ -2.48
PDX1P52945 MIR488-201ENST00000365739 83 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 RNU6-32P-201ENST00000383948 107 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 RNU6-44P-201ENST00000384045 107 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 RNU6-13P-201ENST00000384248 107 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 RNU6-12P-201ENST00000384604 107 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 SNORD56B-201ENST00000384713 71 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 RNU6-41P-201ENST00000384741 107 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 SNORA40.17-201ENST00000517256 115 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 MIR4263-201ENST00000584745 83 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 MIR4773-1-201ENST00000637203 78 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 RNA5SP368-201ENST00000364298 116 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 SNORD114-15-201ENST00000364687 72 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 RNU6-900P-201ENST00000384498 102 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 snoU13.13-201ENST00000458842 104 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 SNORD2-201ENST00000459163 69 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 RNU7-55P-201ENST00000459426 62 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 MIR548AI-201ENST00000579940 88 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 MIR4432-201ENST00000581823 84 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 MIR4668-201ENST00000582284 70 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 MIR4436A-201ENST00000585278 85 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 RNU6-905P-201ENST00000384434 107 ntBASIC-0.44□□□□□ -2.48
PDX1P52945 MIR519C-201ENST00000385053 87 ntBASIC-0.44□□□□□ -2.48
PDX1P52945 RNU6-284P-201ENST00000411105 106 ntBASIC-0.44□□□□□ -2.48
PDX1P52945 AC006254.2-201ENST00000603259 279 ntBASIC-0.44□□□□□ -2.48
PDX1P52945 MIR548AZ-201ENST00000616567 95 ntBASIC-0.44□□□□□ -2.48
PDX1P52945 uc_338.36-201ENST00000622331 158 ntBASIC-0.44□□□□□ -2.48
PDX1P52945 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.45□□□□□ -2.48
PDX1P52945 RNU6-502P-201ENST00000362419 108 ntBASIC-0.45□□□□□ -2.48
PDX1P52945 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.45□□□□□ -2.48
PDX1P52945 AC114755.3-201ENST00000481111 251 ntBASIC-0.45□□□□□ -2.48
PDX1P52945 AC021146.9-201ENST00000512503 156 ntBASIC-0.45□□□□□ -2.48
PDX1P52945 RNA5SP66-201ENST00000517178 101 ntBASIC-0.45□□□□□ -2.48
PDX1P52945 U6.81-201ENST00000612550 106 ntBASIC-0.45□□□□□ -2.48
PDX1P52945 RNA5SP451-201ENST00000410588 110 ntBASIC-0.46□□□□□ -2.48
PDX1P52945 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.46□□□□□ -2.48
PDX1P52945 RNU6-633P-201ENST00000362612 103 ntBASIC-0.47□□□□□ -2.48
PDX1P52945 RNU6-219P-201ENST00000364728 107 ntBASIC-0.47□□□□□ -2.48
PDX1P52945 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.47□□□□□ -2.48
PDX1P52945 snoU13.19-201ENST00000459148 104 ntBASIC-0.47□□□□□ -2.48
PDX1P52945 MIR203A-201ENST00000384836 110 ntBASIC-0.48□□□□□ -2.49
PDX1P52945 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
PDX1P52945 SNORD75.1-201ENST00000408373 60 ntBASIC-0.48□□□□□ -2.49
PDX1P52945 AL445193.1-201ENST00000441183 141 ntBASIC-0.48□□□□□ -2.49
PDX1P52945 MIR6773-201ENST00000612812 74 ntBASIC-0.48□□□□□ -2.49
PDX1P52945 SNORD114-14-201ENST00000362723 75 ntBASIC-0.49□□□□□ -2.49
PDX1P52945 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.49□□□□□ -2.49
PDX1P52945 RNY1P7-201ENST00000384743 110 ntBASIC-0.49□□□□□ -2.49
PDX1P52945 RNU6-402P-201ENST00000410678 103 ntBASIC-0.49□□□□□ -2.49
PDX1P52945 RPS29P8-201ENST00000445109 171 ntBASIC-0.49□□□□□ -2.49
PDX1P52945 RNU6-267P-201ENST00000516714 103 ntBASIC-0.49□□□□□ -2.49
PDX1P52945 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.5□□□□□ -2.49
PDX1P52945 RNU6-274P-201ENST00000459566 107 ntBASIC-0.5□□□□□ -2.49
PDX1P52945 SNORD38.3-201ENST00000516599 73 ntBASIC-0.5□□□□□ -2.49
PDX1P52945 MIR6509-201ENST00000614603 85 ntBASIC-0.5□□□□□ -2.49
PDX1P52945 MIR6851-201ENST00000617060 67 ntBASIC-0.5□□□□□ -2.49
PDX1P52945 RNU6-208P-201ENST00000362431 107 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 RNU6-497P-201ENST00000365316 104 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 SNORD116-22-201ENST00000384430 92 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 RNU6-901P-201ENST00000384593 106 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 RNU6-337P-201ENST00000391243 106 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 AL450471.1-201ENST00000447509 127 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 RNA5SP147-201ENST00000516493 109 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 MIR3681-201ENST00000580089 72 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 MIR3657-201ENST00000584818 117 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.51□□□□□ -2.49
PDX1P52945 RNU6-260P-201ENST00000384092 107 ntBASIC-0.52□□□□□ -2.49
PDX1P52945 MIRLET7B-201ENST00000385140 83 ntBASIC-0.52□□□□□ -2.49
PDX1P52945 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.52□□□□□ -2.49
PDX1P52945 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.52□□□□□ -2.49
PDX1P52945 MIR8068-201ENST00000618032 68 ntBASIC-0.52□□□□□ -2.49
PDX1P52945 AC093726.3-201ENST00000637588 150 ntBASIC-0.52□□□□□ -2.49
PDX1P52945 RNU6-973P-201ENST00000364690 107 ntBASIC-0.53□□□□□ -2.49
PDX1P52945 RNU6-721P-201ENST00000410155 105 ntBASIC-0.53□□□□□ -2.49
PDX1P52945 AL691482.2-201ENST00000457453 84 ntBASIC-0.53□□□□□ -2.49
PDX1P52945 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.53□□□□□ -2.49
PDX1P52945 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.53□□□□□ -2.49
PDX1P52945 SNORD115-37-201ENST00000363768 82 ntBASIC-0.54□□□□□ -2.5
PDX1P52945 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.54□□□□□ -2.5
PDX1P52945 SNORD77.2-201ENST00000391045 68 ntBASIC-0.54□□□□□ -2.5
PDX1P52945 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.54□□□□□ -2.5
PDX1P52945 RNU6-168P-201ENST00000516189 101 ntBASIC-0.54□□□□□ -2.5
PDX1P52945 MIR5704-201ENST00000584029 77 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 232.6 ms