Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 RNU6-824P-201ENST00000363724 104 ntBASIC-0.39□□□□□ -2.47
PDX1P52945 RNU6-382P-201ENST00000365181 106 ntBASIC-0.39□□□□□ -2.47
PDX1P52945 RNU6-147P-201ENST00000383983 107 ntBASIC-0.39□□□□□ -2.47
PDX1P52945 MIR1236-201ENST00000408340 102 ntBASIC-0.39□□□□□ -2.47
PDX1P52945 RNU7-24P-201ENST00000458867 62 ntBASIC-0.39□□□□□ -2.47
PDX1P52945 AC108676.2-201ENST00000605225 163 ntBASIC-0.39□□□□□ -2.47
PDX1P52945 MALAT1.1-201ENST00000618249 95 ntBASIC-0.39□□□□□ -2.47
PDX1P52945 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.4□□□□□ -2.47
PDX1P52945 SNORA32.3-201ENST00000384772 121 ntBASIC-0.4□□□□□ -2.47
PDX1P52945 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
PDX1P52945 AL035461.1-201ENST00000421490 332 ntBASIC-0.4□□□□□ -2.47
PDX1P52945 SNORA40.13-201ENST00000516379 120 ntBASIC-0.4□□□□□ -2.47
PDX1P52945 RNU6-640P-201ENST00000363693 105 ntBASIC-0.41□□□□□ -2.48
PDX1P52945 SNORA63.6-201ENST00000364921 119 ntBASIC-0.41□□□□□ -2.48
PDX1P52945 RNA5SP169-201ENST00000517268 117 ntBASIC-0.41□□□□□ -2.48
PDX1P52945 AL391099.1-201ENST00000624635 187 ntBASIC-0.41□□□□□ -2.48
PDX1P52945 MIR488-201ENST00000365739 83 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 RNU6-32P-201ENST00000383948 107 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 RNU6-44P-201ENST00000384045 107 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 RNU6-13P-201ENST00000384248 107 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 RNU6-12P-201ENST00000384604 107 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 SNORD56B-201ENST00000384713 71 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 RNU6-41P-201ENST00000384741 107 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 SNORA40.17-201ENST00000517256 115 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 MIR4263-201ENST00000584745 83 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 MIR4773-1-201ENST00000637203 78 ntBASIC-0.42□□□□□ -2.48
PDX1P52945 RNA5SP368-201ENST00000364298 116 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 SNORD114-15-201ENST00000364687 72 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 RNU6-900P-201ENST00000384498 102 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 snoU13.13-201ENST00000458842 104 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 SNORD2-201ENST00000459163 69 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 RNU7-55P-201ENST00000459426 62 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 MIR548AI-201ENST00000579940 88 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 MIR4432-201ENST00000581823 84 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 MIR4668-201ENST00000582284 70 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 MIR4436A-201ENST00000585278 85 ntBASIC-0.43□□□□□ -2.48
PDX1P52945 RNU6-905P-201ENST00000384434 107 ntBASIC-0.44□□□□□ -2.48
PDX1P52945 MIR519C-201ENST00000385053 87 ntBASIC-0.44□□□□□ -2.48
PDX1P52945 RNU6-284P-201ENST00000411105 106 ntBASIC-0.44□□□□□ -2.48
PDX1P52945 AC006254.2-201ENST00000603259 279 ntBASIC-0.44□□□□□ -2.48
PDX1P52945 MIR548AZ-201ENST00000616567 95 ntBASIC-0.44□□□□□ -2.48
PDX1P52945 uc_338.36-201ENST00000622331 158 ntBASIC-0.44□□□□□ -2.48
PDX1P52945 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.45□□□□□ -2.48
PDX1P52945 RNU6-502P-201ENST00000362419 108 ntBASIC-0.45□□□□□ -2.48
PDX1P52945 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.45□□□□□ -2.48
PDX1P52945 AC114755.3-201ENST00000481111 251 ntBASIC-0.45□□□□□ -2.48
PDX1P52945 AC021146.9-201ENST00000512503 156 ntBASIC-0.45□□□□□ -2.48
PDX1P52945 RNA5SP66-201ENST00000517178 101 ntBASIC-0.45□□□□□ -2.48
PDX1P52945 U6.81-201ENST00000612550 106 ntBASIC-0.45□□□□□ -2.48
PDX1P52945 RNA5SP451-201ENST00000410588 110 ntBASIC-0.46□□□□□ -2.48
PDX1P52945 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.46□□□□□ -2.48
PDX1P52945 RNU6-633P-201ENST00000362612 103 ntBASIC-0.47□□□□□ -2.48
PDX1P52945 RNU6-219P-201ENST00000364728 107 ntBASIC-0.47□□□□□ -2.48
PDX1P52945 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.47□□□□□ -2.48
PDX1P52945 snoU13.19-201ENST00000459148 104 ntBASIC-0.47□□□□□ -2.48
PDX1P52945 MIR203A-201ENST00000384836 110 ntBASIC-0.48□□□□□ -2.49
PDX1P52945 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.48□□□□□ -2.49
PDX1P52945 SNORD75.1-201ENST00000408373 60 ntBASIC-0.48□□□□□ -2.49
PDX1P52945 AL445193.1-201ENST00000441183 141 ntBASIC-0.48□□□□□ -2.49
PDX1P52945 MIR6773-201ENST00000612812 74 ntBASIC-0.48□□□□□ -2.49
PDX1P52945 SNORD114-14-201ENST00000362723 75 ntBASIC-0.49□□□□□ -2.49
PDX1P52945 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.49□□□□□ -2.49
PDX1P52945 RNY1P7-201ENST00000384743 110 ntBASIC-0.49□□□□□ -2.49
PDX1P52945 RNU6-402P-201ENST00000410678 103 ntBASIC-0.49□□□□□ -2.49
PDX1P52945 RPS29P8-201ENST00000445109 171 ntBASIC-0.49□□□□□ -2.49
PDX1P52945 RNU6-267P-201ENST00000516714 103 ntBASIC-0.49□□□□□ -2.49
PDX1P52945 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.5□□□□□ -2.49
PDX1P52945 RNU6-274P-201ENST00000459566 107 ntBASIC-0.5□□□□□ -2.49
PDX1P52945 SNORD38.3-201ENST00000516599 73 ntBASIC-0.5□□□□□ -2.49
PDX1P52945 MIR6509-201ENST00000614603 85 ntBASIC-0.5□□□□□ -2.49
PDX1P52945 MIR6851-201ENST00000617060 67 ntBASIC-0.5□□□□□ -2.49
PDX1P52945 RNU6-208P-201ENST00000362431 107 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 RNU6-497P-201ENST00000365316 104 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 SNORD116-22-201ENST00000384430 92 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 RNU6-901P-201ENST00000384593 106 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 RNU6-337P-201ENST00000391243 106 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 AL450471.1-201ENST00000447509 127 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 RNA5SP147-201ENST00000516493 109 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 MIR3681-201ENST00000580089 72 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 MIR3657-201ENST00000584818 117 ntBASIC-0.51□□□□□ -2.49
PDX1P52945 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.51□□□□□ -2.49
PDX1P52945 RNU6-260P-201ENST00000384092 107 ntBASIC-0.52□□□□□ -2.49
PDX1P52945 MIRLET7B-201ENST00000385140 83 ntBASIC-0.52□□□□□ -2.49
PDX1P52945 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.52□□□□□ -2.49
PDX1P52945 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.52□□□□□ -2.49
PDX1P52945 MIR8068-201ENST00000618032 68 ntBASIC-0.52□□□□□ -2.49
PDX1P52945 AC093726.3-201ENST00000637588 150 ntBASIC-0.52□□□□□ -2.49
PDX1P52945 RNU6-973P-201ENST00000364690 107 ntBASIC-0.53□□□□□ -2.49
PDX1P52945 RNU6-721P-201ENST00000410155 105 ntBASIC-0.53□□□□□ -2.49
PDX1P52945 AL691482.2-201ENST00000457453 84 ntBASIC-0.53□□□□□ -2.49
PDX1P52945 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.53□□□□□ -2.49
PDX1P52945 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.53□□□□□ -2.49
PDX1P52945 SNORD115-37-201ENST00000363768 82 ntBASIC-0.54□□□□□ -2.5
PDX1P52945 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.54□□□□□ -2.5
PDX1P52945 SNORD77.2-201ENST00000391045 68 ntBASIC-0.54□□□□□ -2.5
PDX1P52945 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.54□□□□□ -2.5
PDX1P52945 RNU6-168P-201ENST00000516189 101 ntBASIC-0.54□□□□□ -2.5
PDX1P52945 MIR5704-201ENST00000584029 77 ntBASIC-0.54□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms