Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 MIR548C-201ENST00000384815 97 ntBASIC-3.06□□□□□ -2.9
SRP9P49458 RNU6-239P-201ENST00000390990 99 ntBASIC-3.06□□□□□ -2.9
SRP9P49458 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.06□□□□□ -2.9
SRP9P49458 DNAJC19P2-201ENST00000593340 302 ntBASIC-3.06□□□□□ -2.9
SRP9P49458 RNY3P2-201ENST00000362918 102 ntBASIC-3.07□□□□□ -2.9
SRP9P49458 RNU6-915P-201ENST00000364943 103 ntBASIC-3.07□□□□□ -2.9
SRP9P49458 Y_RNA.483-201ENST00000384380 101 ntBASIC-3.07□□□□□ -2.9
SRP9P49458 Y_RNA.529-201ENST00000384586 119 ntBASIC-3.07□□□□□ -2.9
SRP9P49458 RNU6-713P-201ENST00000384761 107 ntBASIC-3.07□□□□□ -2.9
SRP9P49458 RNU6-988P-201ENST00000519081 107 ntBASIC-3.07□□□□□ -2.9
SRP9P49458 RNU6-1318P-201ENST00000365389 103 ntBASIC-3.08□□□□□ -2.9
SRP9P49458 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.08□□□□□ -2.9
SRP9P49458 RNU6-918P-201ENST00000391219 106 ntBASIC-3.08□□□□□ -2.9
SRP9P49458 RNU6-781P-201ENST00000516377 101 ntBASIC-3.08□□□□□ -2.9
SRP9P49458 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-3.08□□□□□ -2.9
SRP9P49458 Y_RNA.158-201ENST00000363651 101 ntBASIC-3.09□□□□□ -2.9
SRP9P49458 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.09□□□□□ -2.9
SRP9P49458 Y_RNA.563-201ENST00000384707 108 ntBASIC-3.09□□□□□ -2.9
SRP9P49458 RNU6-460P-201ENST00000391158 108 ntBASIC-3.09□□□□□ -2.9
SRP9P49458 RNU6-752P-201ENST00000516376 102 ntBASIC-3.09□□□□□ -2.9
SRP9P49458 Y_RNA.95-201ENST00000363079 95 ntBASIC-3.1□□□□□ -2.91
SRP9P49458 SNORD45B-201ENST00000364617 72 ntBASIC-3.1□□□□□ -2.91
SRP9P49458 SNORD42.2-201ENST00000365570 69 ntBASIC-3.1□□□□□ -2.91
SRP9P49458 RNU6-1113P-201ENST00000384348 107 ntBASIC-3.1□□□□□ -2.91
SRP9P49458 RNU6-118P-201ENST00000516552 102 ntBASIC-3.1□□□□□ -2.91
SRP9P49458 RNU6-1153P-201ENST00000516760 105 ntBASIC-3.1□□□□□ -2.91
SRP9P49458 RNU6-623P-201ENST00000363143 105 ntBASIC-3.11□□□□□ -2.91
SRP9P49458 Y_RNA.356-201ENST00000365475 113 ntBASIC-3.11□□□□□ -2.91
SRP9P49458 RNU6-258P-201ENST00000390884 101 ntBASIC-3.11□□□□□ -2.91
SRP9P49458 Y_RNA.606-201ENST00000410579 103 ntBASIC-3.11□□□□□ -2.91
SRP9P49458 RNU7-121P-201ENST00000516604 62 ntBASIC-3.11□□□□□ -2.91
SRP9P49458 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-3.11□□□□□ -2.91
SRP9P49458 RNU4-88P-201ENST00000411220 86 ntBASIC-3.13□□□□□ -2.91
SRP9P49458 SNORD54-201ENST00000459159 67 ntBASIC-3.13□□□□□ -2.91
SRP9P49458 Y_RNA.309-201ENST00000365046 111 ntBASIC-3.14□□□□□ -2.91
SRP9P49458 Y_RNA.449-201ENST00000384187 102 ntBASIC-3.14□□□□□ -2.91
SRP9P49458 MIR548A3-201ENST00000385297 97 ntBASIC-3.14□□□□□ -2.91
SRP9P49458 MTND2P23-201ENST00000422990 651 ntBASIC-3.14□□□□□ -2.91
SRP9P49458 RNU6-1219P-201ENST00000516143 112 ntBASIC-3.14□□□□□ -2.91
SRP9P49458 MIR4680-201ENST00000580906 66 ntBASIC-3.14□□□□□ -2.91
SRP9P49458 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.15□□□□□ -2.91
SRP9P49458 RNU6-861P-201ENST00000516745 106 ntBASIC-3.15□□□□□ -2.91
SRP9P49458 MIR4796-201ENST00000580742 81 ntBASIC-3.15□□□□□ -2.91
SRP9P49458 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.16□□□□□ -2.92
SRP9P49458 Y_RNA.435-201ENST00000384095 112 ntBASIC-3.16□□□□□ -2.92
SRP9P49458 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-3.16□□□□□ -2.92
SRP9P49458 U6.104-201ENST00000637979 90 ntBASIC-3.16□□□□□ -2.92
SRP9P49458 RNU6-598P-201ENST00000364017 105 ntBASIC-3.17□□□□□ -2.92
SRP9P49458 RNY4P7-201ENST00000364600 96 ntBASIC-3.17□□□□□ -2.92
SRP9P49458 RNU7-197P-201ENST00000458836 62 ntBASIC-3.17□□□□□ -2.92
SRP9P49458 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.18□□□□□ -2.92
SRP9P49458 RNU6-194P-201ENST00000363862 105 ntBASIC-3.18□□□□□ -2.92
SRP9P49458 RNU4-11P-201ENST00000365287 132 ntBASIC-3.18□□□□□ -2.92
SRP9P49458 RNU6-474P-201ENST00000384243 107 ntBASIC-3.18□□□□□ -2.92
SRP9P49458 AL450471.1-201ENST00000447509 127 ntBASIC-3.18□□□□□ -2.92
SRP9P49458 MIR429-201ENST00000362106 83 ntBASIC-3.19□□□□□ -2.92
SRP9P49458 Y_RNA.211-201ENST00000364164 101 ntBASIC-3.19□□□□□ -2.92
SRP9P49458 AC025166.1-201ENST00000612411 163 ntBASIC-3.19□□□□□ -2.92
SRP9P49458 RNU6-645P-201ENST00000364649 106 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 Y_RNA.403-201ENST00000383977 101 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 Y_RNA.419-201ENST00000384041 102 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 AL035461.1-201ENST00000421490 332 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 MIR4777-201ENST00000583710 86 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 Y_RNA.781-201ENST00000620301 103 ntBASIC-3.2□□□□□ -2.92
SRP9P49458 Y_RNA.10-201ENST00000362371 110 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 Y_RNA.29-201ENST00000362570 113 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 RNU6-340P-201ENST00000364005 107 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 Y_RNA.591-201ENST00000410228 104 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 AL158147.1-201ENST00000443970 75 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 RNU6-1137P-201ENST00000517073 99 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 MIR4795-201ENST00000584182 89 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 U2.18-201ENST00000622185 84 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 AL035470.1-201ENST00000622571 220 ntBASIC-3.21□□□□□ -2.92
SRP9P49458 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.22□□□□□ -2.92
SRP9P49458 AC026407.1-201ENST00000518369 204 ntBASIC-3.22□□□□□ -2.92
SRP9P49458 MIR8062-201ENST00000621515 85 ntBASIC-3.22□□□□□ -2.92
SRP9P49458 RNA5SP405-201ENST00000363059 114 ntBASIC-3.23□□□□□ -2.93
SRP9P49458 RNU6-795P-201ENST00000516323 103 ntBASIC-3.23□□□□□ -2.93
SRP9P49458 MIR3144-201ENST00000579460 79 ntBASIC-3.23□□□□□ -2.93
SRP9P49458 MIR3170-201ENST00000582699 77 ntBASIC-3.23□□□□□ -2.93
SRP9P49458 RNU6-639P-201ENST00000384074 107 ntBASIC-3.24□□□□□ -2.93
SRP9P49458 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.24□□□□□ -2.93
SRP9P49458 RNU7-174P-201ENST00000516248 59 ntBASIC-3.24□□□□□ -2.93
SRP9P49458 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.24□□□□□ -2.93
SRP9P49458 RNU6-681P-201ENST00000364012 104 ntBASIC-3.25□□□□□ -2.93
SRP9P49458 RNU6-1020P-201ENST00000363684 107 ntBASIC-3.28□□□□□ -2.93
SRP9P49458 RNU6-875P-201ENST00000516488 106 ntBASIC-3.28□□□□□ -2.93
SRP9P49458 RNU6-1061P-201ENST00000516530 99 ntBASIC-3.28□□□□□ -2.93
SRP9P49458 AC022559.1-201ENST00000520905 205 ntBASIC-3.28□□□□□ -2.93
SRP9P49458 VTRNA2-1-201ENST00000602301 127 ntBASIC-3.28□□□□□ -2.93
SRP9P49458 AC012531.4-201ENST00000616509 177 ntBASIC-3.28□□□□□ -2.93
SRP9P49458 RNU6-247P-201ENST00000362636 107 ntBASIC-3.29□□□□□ -2.94
SRP9P49458 RNU6-682P-201ENST00000363843 106 ntBASIC-3.29□□□□□ -2.94
SRP9P49458 Y_RNA.233-201ENST00000364407 101 ntBASIC-3.29□□□□□ -2.94
SRP9P49458 SNORD58A-201ENST00000383875 65 ntBASIC-3.29□□□□□ -2.94
SRP9P49458 Y_RNA.564-201ENST00000384708 106 ntBASIC-3.29□□□□□ -2.94
SRP9P49458 RNU6-587P-201ENST00000391282 106 ntBASIC-3.29□□□□□ -2.94
SRP9P49458 RNU6-635P-201ENST00000516651 102 ntBASIC-3.29□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms