Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.6□□□□□ -2.67
RFC3P40938 RNU6-704P-201ENST00000364162 103 ntBASIC-1.6□□□□□ -2.67
RFC3P40938 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.6□□□□□ -2.67
RFC3P40938 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.6□□□□□ -2.67
RFC3P40938 SNORD116-18-201ENST00000383961 92 ntBASIC-1.6□□□□□ -2.67
RFC3P40938 SNORA26.4-201ENST00000391188 123 ntBASIC-1.6□□□□□ -2.67
RFC3P40938 RNU6-732P-201ENST00000516033 103 ntBASIC-1.6□□□□□ -2.67
RFC3P40938 RNU6-62P-201ENST00000516526 102 ntBASIC-1.6□□□□□ -2.67
RFC3P40938 RNU6-228P-201ENST00000362700 106 ntBASIC-1.61□□□□□ -2.67
RFC3P40938 RNU6-924P-201ENST00000362926 108 ntBASIC-1.61□□□□□ -2.67
RFC3P40938 RNY4P27-201ENST00000363341 96 ntBASIC-1.61□□□□□ -2.67
RFC3P40938 SNORD115-33-201ENST00000363723 82 ntBASIC-1.61□□□□□ -2.67
RFC3P40938 SNORD45B-201ENST00000364617 72 ntBASIC-1.61□□□□□ -2.67
RFC3P40938 MIR1255B2-201ENST00000408618 67 ntBASIC-1.61□□□□□ -2.67
RFC3P40938 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.61□□□□□ -2.67
RFC3P40938 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.62□□□□□ -2.67
RFC3P40938 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.62□□□□□ -2.67
RFC3P40938 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.62□□□□□ -2.67
RFC3P40938 MIR487B-201ENST00000385021 84 ntBASIC-1.62□□□□□ -2.67
RFC3P40938 snoU13.17-201ENST00000458802 104 ntBASIC-1.62□□□□□ -2.67
RFC3P40938 MIR3613-201ENST00000579844 87 ntBASIC-1.62□□□□□ -2.67
RFC3P40938 AC006254.2-201ENST00000603259 279 ntBASIC-1.62□□□□□ -2.67
RFC3P40938 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.63□□□□□ -2.67
RFC3P40938 SNORA33.1-201ENST00000364957 130 ntBASIC-1.63□□□□□ -2.67
RFC3P40938 RNU6-260P-201ENST00000384092 107 ntBASIC-1.63□□□□□ -2.67
RFC3P40938 RNU6-813P-201ENST00000384691 107 ntBASIC-1.63□□□□□ -2.67
RFC3P40938 RNU6-394P-201ENST00000410735 107 ntBASIC-1.63□□□□□ -2.67
RFC3P40938 MIR548Z-201ENST00000584743 97 ntBASIC-1.63□□□□□ -2.67
RFC3P40938 AC103810.7-201ENST00000607821 91 ntBASIC-1.63□□□□□ -2.67
RFC3P40938 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.64□□□□□ -2.67
RFC3P40938 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.64□□□□□ -2.67
RFC3P40938 RNU6-382P-201ENST00000365181 106 ntBASIC-1.64□□□□□ -2.67
RFC3P40938 RNU6-880P-201ENST00000384526 107 ntBASIC-1.64□□□□□ -2.67
RFC3P40938 MIR203A-201ENST00000384836 110 ntBASIC-1.64□□□□□ -2.67
RFC3P40938 MIR4503-201ENST00000582187 83 ntBASIC-1.64□□□□□ -2.67
RFC3P40938 AL035470.1-201ENST00000622571 220 ntBASIC-1.64□□□□□ -2.67
RFC3P40938 RNU6-200P-201ENST00000364743 107 ntBASIC-1.65□□□□□ -2.67
RFC3P40938 MIR569-201ENST00000385228 96 ntBASIC-1.65□□□□□ -2.67
RFC3P40938 MTATP6P29-201ENST00000415057 132 ntBASIC-1.65□□□□□ -2.67
RFC3P40938 RNU6-327P-201ENST00000516270 127 ntBASIC-1.65□□□□□ -2.67
RFC3P40938 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.66□□□□□ -2.68
RFC3P40938 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.66□□□□□ -2.68
RFC3P40938 SNORD90-201ENST00000391145 111 ntBASIC-1.66□□□□□ -2.68
RFC3P40938 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.66□□□□□ -2.68
RFC3P40938 RNU6-519P-201ENST00000410590 108 ntBASIC-1.66□□□□□ -2.68
RFC3P40938 Y_RNA.678-201ENST00000516408 96 ntBASIC-1.66□□□□□ -2.68
RFC3P40938 MIR4773-1-201ENST00000637203 78 ntBASIC-1.66□□□□□ -2.68
RFC3P40938 RNA5SP26-201ENST00000362406 119 ntBASIC-1.67□□□□□ -2.68
RFC3P40938 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.67□□□□□ -2.68
RFC3P40938 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.67□□□□□ -2.68
RFC3P40938 SNORD115-22-201ENST00000364456 82 ntBASIC-1.67□□□□□ -2.68
RFC3P40938 MIR507-201ENST00000385234 94 ntBASIC-1.67□□□□□ -2.68
RFC3P40938 RNA5SP292-201ENST00000390974 118 ntBASIC-1.67□□□□□ -2.68
RFC3P40938 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.67□□□□□ -2.68
RFC3P40938 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.67□□□□□ -2.68
RFC3P40938 CYP3A54P-201ENST00000566950 75 ntBASIC-1.67□□□□□ -2.68
RFC3P40938 RNU6-196P-201ENST00000384315 107 ntBASIC-1.68□□□□□ -2.68
RFC3P40938 MTND3P2-201ENST00000438452 342 ntBASIC-1.68□□□□□ -2.68
RFC3P40938 MIR4723-201ENST00000585070 81 ntBASIC-1.68□□□□□ -2.68
RFC3P40938 MIR6509-201ENST00000614603 85 ntBASIC-1.68□□□□□ -2.68
RFC3P40938 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.69□□□□□ -2.68
RFC3P40938 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.69□□□□□ -2.68
RFC3P40938 AC108019.1-201ENST00000512540 175 ntBASIC-1.69□□□□□ -2.68
RFC3P40938 SNORA18.5-201ENST00000516616 101 ntBASIC-1.69□□□□□ -2.68
RFC3P40938 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.7□□□□□ -2.68
RFC3P40938 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.7□□□□□ -2.68
RFC3P40938 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.7□□□□□ -2.68
RFC3P40938 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.7□□□□□ -2.68
RFC3P40938 AL353691.2-201ENST00000443795 59 ntBASIC-1.7□□□□□ -2.68
RFC3P40938 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-1.7□□□□□ -2.68
RFC3P40938 MIR4756-201ENST00000577874 78 ntBASIC-1.7□□□□□ -2.68
RFC3P40938 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.7□□□□□ -2.68
RFC3P40938 RNU6-164P-201ENST00000364604 103 ntBASIC-1.71□□□□□ -2.68
RFC3P40938 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.71□□□□□ -2.68
RFC3P40938 RNU6-118P-201ENST00000516552 102 ntBASIC-1.71□□□□□ -2.68
RFC3P40938 MIR3657-201ENST00000584818 117 ntBASIC-1.71□□□□□ -2.68
RFC3P40938 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.72□□□□□ -2.68
RFC3P40938 RNU6-804P-201ENST00000384286 107 ntBASIC-1.72□□□□□ -2.68
RFC3P40938 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.72□□□□□ -2.68
RFC3P40938 AL078595.1-201ENST00000404458 226 ntBASIC-1.72□□□□□ -2.68
RFC3P40938 MIR548I1-201ENST00000408810 149 ntBASIC-1.72□□□□□ -2.68
RFC3P40938 RNU6-772P-201ENST00000516042 105 ntBASIC-1.72□□□□□ -2.68
RFC3P40938 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.72□□□□□ -2.68
RFC3P40938 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.72□□□□□ -2.68
RFC3P40938 MIR5009-201ENST00000578736 100 ntBASIC-1.72□□□□□ -2.68
RFC3P40938 MIR3144-201ENST00000579460 79 ntBASIC-1.72□□□□□ -2.68
RFC3P40938 AC004792.1-201ENST00000614523 137 ntBASIC-1.72□□□□□ -2.68
RFC3P40938 AL157777.2-201ENST00000258070 137 ntBASIC-1.73□□□□□ -2.69
RFC3P40938 RNU5F-1-201ENST00000362507 117 ntBASIC-1.73□□□□□ -2.69
RFC3P40938 RNU6-824P-201ENST00000363724 104 ntBASIC-1.73□□□□□ -2.69
RFC3P40938 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.73□□□□□ -2.69
RFC3P40938 AL691482.2-201ENST00000457453 84 ntBASIC-1.73□□□□□ -2.69
RFC3P40938 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.73□□□□□ -2.69
RFC3P40938 MIR1207-201ENST00000408249 87 ntBASIC-1.74□□□□□ -2.69
RFC3P40938 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.75□□□□□ -2.69
RFC3P40938 RNU6-80P-201ENST00000384195 107 ntBASIC-1.75□□□□□ -2.69
RFC3P40938 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.75□□□□□ -2.69
RFC3P40938 MIR496-201ENST00000385226 102 ntBASIC-1.75□□□□□ -2.69
RFC3P40938 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.75□□□□□ -2.69
RFC3P40938 MIR4777-201ENST00000583710 86 ntBASIC-1.75□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms