Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 RNU1-29P-201ENST00000606574 126 ntBASIC1.21□□□□□ -2.22
CLCN1P35523 SNORD118-201ENST00000363593 134 ntBASIC1.2□□□□□ -2.22
CLCN1P35523 SNORD114-27-201ENST00000363766 70 ntBASIC1.2□□□□□ -2.22
CLCN1P35523 RNU1-93P-201ENST00000364704 169 ntBASIC1.19□□□□□ -2.22
CLCN1P35523 SNORA33.1-201ENST00000364957 130 ntBASIC1.19□□□□□ -2.22
CLCN1P35523 Y_RNA.633-201ENST00000459107 95 ntBASIC1.19□□□□□ -2.22
CLCN1P35523 MIR6788-201ENST00000618842 66 ntBASIC1.19□□□□□ -2.22
CLCN1P35523 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
CLCN1P35523 SNORA2A-201ENST00000383885 135 ntBASIC1.18□□□□□ -2.22
CLCN1P35523 RNU6-110P-201ENST00000384508 104 ntBASIC1.18□□□□□ -2.22
CLCN1P35523 SCARNA21.1-201ENST00000515996 128 ntBASIC1.18□□□□□ -2.22
CLCN1P35523 RNU6-229P-201ENST00000516614 102 ntBASIC1.18□□□□□ -2.22
CLCN1P35523 Y_RNA.125-201ENST00000363371 111 ntBASIC1.17□□□□□ -2.22
CLCN1P35523 RNU6-302P-201ENST00000365249 107 ntBASIC1.17□□□□□ -2.22
CLCN1P35523 Y_RNA.423-201ENST00000384057 113 ntBASIC1.17□□□□□ -2.22
CLCN1P35523 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.17□□□□□ -2.22
CLCN1P35523 U7.6-201ENST00000610841 64 ntBASIC1.17□□□□□ -2.22
CLCN1P35523 RNU6-669P-201ENST00000365575 107 ntBASIC1.16□□□□□ -2.22
CLCN1P35523 AC211469.2-201ENST00000605461 205 ntBASIC1.16□□□□□ -2.22
CLCN1P35523 SNORA25.5-201ENST00000363782 126 ntBASIC1.15□□□□□ -2.23
CLCN1P35523 MIR548J-201ENST00000408833 112 ntBASIC1.15□□□□□ -2.23
CLCN1P35523 AL590095.2-201ENST00000604136 117 ntBASIC1.15□□□□□ -2.23
CLCN1P35523 MIR20A-201ENST00000362279 71 ntBASIC1.14□□□□□ -2.23
CLCN1P35523 MIR518A1-201ENST00000385068 85 ntBASIC1.14□□□□□ -2.23
CLCN1P35523 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
CLCN1P35523 PSMC1P5-201ENST00000512850 177 ntBASIC1.14□□□□□ -2.23
CLCN1P35523 SNORD114-21-201ENST00000606412 72 ntBASIC1.14□□□□□ -2.23
CLCN1P35523 RNU6-499P-201ENST00000365615 107 ntBASIC1.13□□□□□ -2.23
CLCN1P35523 AC244090.1-201ENST00000441884 93 ntBASIC1.13□□□□□ -2.23
CLCN1P35523 RPL39P28-201ENST00000465655 155 ntBASIC1.13□□□□□ -2.23
CLCN1P35523 RNU4-54P-201ENST00000516428 129 ntBASIC1.13□□□□□ -2.23
CLCN1P35523 U6.96-201ENST00000636425 70 ntBASIC1.12□□□□□ -2.23
CLCN1P35523 RNA5SP192-201ENST00000364404 120 ntBASIC1.11□□□□□ -2.23
CLCN1P35523 Y_RNA.374-201ENST00000365606 101 ntBASIC1.11□□□□□ -2.23
CLCN1P35523 MIR4295-201ENST00000585286 85 ntBASIC1.11□□□□□ -2.23
CLCN1P35523 U2.7-201ENST00000619197 100 ntBASIC1.11□□□□□ -2.23
CLCN1P35523 MIR630-201ENST00000384957 97 ntBASIC1.1□□□□□ -2.23
CLCN1P35523 MIR517B-201ENST00000385102 67 ntBASIC1.1□□□□□ -2.23
CLCN1P35523 MIR516B1-201ENST00000385211 90 ntBASIC1.1□□□□□ -2.23
CLCN1P35523 AC087343.1-201ENST00000477341 475 ntBASIC1.1□□□□□ -2.23
CLCN1P35523 SNORD114-29-201ENST00000364819 70 ntBASIC1.09□□□□□ -2.23
CLCN1P35523 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.08□□□□□ -2.24
CLCN1P35523 RNU6-1232P-201ENST00000516299 86 ntBASIC1.08□□□□□ -2.24
CLCN1P35523 RNU6-940P-201ENST00000363433 104 ntBASIC1.07□□□□□ -2.24
CLCN1P35523 RNU4-38P-201ENST00000364472 129 ntBASIC1.07□□□□□ -2.24
CLCN1P35523 MTND4LP19-201ENST00000403051 166 ntBASIC1.06□□□□□ -2.24
CLCN1P35523 RNU6-92P-201ENST00000605893 104 ntBASIC1.06□□□□□ -2.24
CLCN1P35523 AC243829.6-201ENST00000612652 106 ntBASIC1.06□□□□□ -2.24
CLCN1P35523 MIR633-201ENST00000384821 98 ntBASIC1.05□□□□□ -2.24
CLCN1P35523 MIR146A-201ENST00000385201 99 ntBASIC1.05□□□□□ -2.24
CLCN1P35523 MIR760-201ENST00000390220 80 ntBASIC1.05□□□□□ -2.24
CLCN1P35523 SNORD113-2-201ENST00000391082 72 ntBASIC1.05□□□□□ -2.24
CLCN1P35523 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.05□□□□□ -2.24
CLCN1P35523 AC098934.3-201ENST00000430450 190 ntBASIC1.05□□□□□ -2.24
CLCN1P35523 RNU7-174P-201ENST00000516248 59 ntBASIC1.05□□□□□ -2.24
CLCN1P35523 RNU7-188P-201ENST00000517063 64 ntBASIC1.05□□□□□ -2.24
CLCN1P35523 MIR466-201ENST00000580653 84 ntBASIC1.05□□□□□ -2.24
CLCN1P35523 RN7SL793P-201ENST00000583259 296 ntBASIC1.05□□□□□ -2.24
CLCN1P35523 MIR6755-201ENST00000619993 66 ntBASIC1.05□□□□□ -2.24
CLCN1P35523 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
CLCN1P35523 RNU6-698P-201ENST00000363523 107 ntBASIC1.04□□□□□ -2.24
CLCN1P35523 RNU6-34P-201ENST00000364874 107 ntBASIC1.04□□□□□ -2.24
CLCN1P35523 MIR216A-201ENST00000385063 110 ntBASIC1.04□□□□□ -2.24
CLCN1P35523 SNORD2-201ENST00000459163 69 ntBASIC1.04□□□□□ -2.24
CLCN1P35523 MIR6767-201ENST00000637302 66 ntBASIC1.04□□□□□ -2.24
CLCN1P35523 RNU6-848P-201ENST00000515948 107 ntBASIC1.03□□□□□ -2.24
CLCN1P35523 RNA5SP436-201ENST00000516020 115 ntBASIC1.03□□□□□ -2.24
CLCN1P35523 RNU6-617P-201ENST00000516147 107 ntBASIC1.03□□□□□ -2.24
CLCN1P35523 RNU6-473P-201ENST00000516164 107 ntBASIC1.03□□□□□ -2.24
CLCN1P35523 RNU6-1049P-201ENST00000516414 107 ntBASIC1.03□□□□□ -2.24
CLCN1P35523 CYP3A54P-201ENST00000566950 75 ntBASIC1.03□□□□□ -2.24
CLCN1P35523 MIR4677-201ENST00000584153 80 ntBASIC1.03□□□□□ -2.24
CLCN1P35523 MIR501-201ENST00000390204 84 ntBASIC1.02□□□□□ -2.25
CLCN1P35523 MIR5000-201ENST00000577717 103 ntBASIC1.02□□□□□ -2.25
CLCN1P35523 AC084368.1-201ENST00000620935 65 ntBASIC1.02□□□□□ -2.25
CLCN1P35523 SNORA75.1-201ENST00000391130 148 ntBASIC0.99□□□□□ -2.25
CLCN1P35523 RNU7-129P-201ENST00000516128 62 ntBASIC0.99□□□□□ -2.25
CLCN1P35523 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.99□□□□□ -2.25
CLCN1P35523 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
CLCN1P35523 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.99□□□□□ -2.25
CLCN1P35523 Y_RNA.30-201ENST00000362572 97 ntBASIC0.98□□□□□ -2.25
CLCN1P35523 RNU6-945P-201ENST00000383947 107 ntBASIC0.98□□□□□ -2.25
CLCN1P35523 RNU6-1079P-201ENST00000362861 110 ntBASIC0.97□□□□□ -2.25
CLCN1P35523 RNA5SP128-201ENST00000365305 116 ntBASIC0.97□□□□□ -2.25
CLCN1P35523 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.97□□□□□ -2.25
CLCN1P35523 RNU6-122P-201ENST00000516818 107 ntBASIC0.97□□□□□ -2.25
CLCN1P35523 MIR548AD-201ENST00000584780 82 ntBASIC0.97□□□□□ -2.25
CLCN1P35523 U4.4-201ENST00000620626 117 ntBASIC0.97□□□□□ -2.25
CLCN1P35523 AC090617.8-201ENST00000623339 167 ntBASIC0.97□□□□□ -2.25
CLCN1P35523 SNORD114-2-201ENST00000363953 78 ntBASIC0.96□□□□□ -2.26
CLCN1P35523 RNU6-351P-201ENST00000516097 100 ntBASIC0.96□□□□□ -2.26
CLCN1P35523 SNORD60.1-201ENST00000362451 73 ntBASIC0.95□□□□□ -2.26
CLCN1P35523 MIR532-201ENST00000385025 91 ntBASIC0.95□□□□□ -2.26
CLCN1P35523 AL021921.1-201ENST00000442774 93 ntBASIC0.95□□□□□ -2.26
CLCN1P35523 AC079150.2-201ENST00000443733 78 ntBASIC0.95□□□□□ -2.26
CLCN1P35523 RNU6-863P-201ENST00000515989 104 ntBASIC0.95□□□□□ -2.26
CLCN1P35523 RNU6-518P-201ENST00000516056 96 ntBASIC0.95□□□□□ -2.26
CLCN1P35523 Y_RNA.246-201ENST00000364495 108 ntBASIC0.94□□□□□ -2.26
CLCN1P35523 MIR1255B2-201ENST00000408618 67 ntBASIC0.94□□□□□ -2.26
CLCN1P35523 RNU6-175P-201ENST00000516896 107 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 191.3 ms