Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.92□□□□□ -2.56
HOXD13P35453 RNA5SP292-201ENST00000390974 118 ntBASIC-0.92□□□□□ -2.56
HOXD13P35453 SNORD75.2-201ENST00000408784 58 ntBASIC-0.92□□□□□ -2.56
HOXD13P35453 AP000533.3-201ENST00000447704 118 ntBASIC-0.92□□□□□ -2.56
HOXD13P35453 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.93□□□□□ -2.56
HOXD13P35453 SNORD74.6-201ENST00000364796 70 ntBASIC-0.93□□□□□ -2.56
HOXD13P35453 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.93□□□□□ -2.56
HOXD13P35453 MIRLET7B-201ENST00000385140 83 ntBASIC-0.93□□□□□ -2.56
HOXD13P35453 SNORA18.5-201ENST00000516616 101 ntBASIC-0.93□□□□□ -2.56
HOXD13P35453 MIR8068-201ENST00000618032 68 ntBASIC-0.93□□□□□ -2.56
HOXD13P35453 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.93□□□□□ -2.56
HOXD13P35453 SNORA24B-201ENST00000384176 131 ntBASIC-0.94□□□□□ -2.56
HOXD13P35453 RNU6-959P-201ENST00000384671 107 ntBASIC-0.94□□□□□ -2.56
HOXD13P35453 SNORD64-201ENST00000386683 67 ntBASIC-0.94□□□□□ -2.56
HOXD13P35453 RNU7-24P-201ENST00000458867 62 ntBASIC-0.94□□□□□ -2.56
HOXD13P35453 MIR548AX-201ENST00000580117 73 ntBASIC-0.94□□□□□ -2.56
HOXD13P35453 AC006254.2-201ENST00000603259 279 ntBASIC-0.94□□□□□ -2.56
HOXD13P35453 RNU5F-1-201ENST00000362507 117 ntBASIC-0.95□□□□□ -2.56
HOXD13P35453 SNORD116-10-201ENST00000363791 102 ntBASIC-0.95□□□□□ -2.56
HOXD13P35453 RNU6-592P-201ENST00000411333 103 ntBASIC-0.95□□□□□ -2.56
HOXD13P35453 snoU13.19-201ENST00000459148 104 ntBASIC-0.95□□□□□ -2.56
HOXD13P35453 HAR1A.1-201ENST00000459583 118 ntBASIC-0.95□□□□□ -2.56
HOXD13P35453 AC140658.3-201ENST00000567603 271 ntBASIC-0.95□□□□□ -2.56
HOXD13P35453 MIR4324-201ENST00000584846 72 ntBASIC-0.95□□□□□ -2.56
HOXD13P35453 MIR382-201ENST00000637119 76 ntBASIC-0.95□□□□□ -2.56
HOXD13P35453 MIR147A-201ENST00000385079 72 ntBASIC-0.96□□□□□ -2.56
HOXD13P35453 RNU6-337P-201ENST00000391243 106 ntBASIC-0.96□□□□□ -2.56
HOXD13P35453 SNORD18.2-201ENST00000459604 70 ntBASIC-0.96□□□□□ -2.56
HOXD13P35453 MIR4773-1-201ENST00000637203 78 ntBASIC-0.96□□□□□ -2.56
HOXD13P35453 SNORD115-23-201ENST00000364461 82 ntBASIC-0.97□□□□□ -2.56
HOXD13P35453 SNORD90-201ENST00000391145 111 ntBASIC-0.97□□□□□ -2.56
HOXD13P35453 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.97□□□□□ -2.56
HOXD13P35453 MIR6738-201ENST00000619620 64 ntBASIC-0.97□□□□□ -2.56
HOXD13P35453 RNU6-382P-201ENST00000365181 106 ntBASIC-0.98□□□□□ -2.57
HOXD13P35453 RNU6-905P-201ENST00000384434 107 ntBASIC-0.98□□□□□ -2.57
HOXD13P35453 RNU6-24P-201ENST00000384440 107 ntBASIC-0.98□□□□□ -2.57
HOXD13P35453 SNORA19.1-201ENST00000410656 129 ntBASIC-0.98□□□□□ -2.57
HOXD13P35453 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.98□□□□□ -2.57
HOXD13P35453 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.99□□□□□ -2.57
HOXD13P35453 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.99□□□□□ -2.57
HOXD13P35453 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.99□□□□□ -2.57
HOXD13P35453 RNA5SP147-201ENST00000516493 109 ntBASIC-0.99□□□□□ -2.57
HOXD13P35453 RNU6-208P-201ENST00000362431 107 ntBASIC-1□□□□□ -2.57
HOXD13P35453 SNORA62.4-201ENST00000365504 151 ntBASIC-1□□□□□ -2.57
HOXD13P35453 MIR4306-201ENST00000583390 91 ntBASIC-1□□□□□ -2.57
HOXD13P35453 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.01□□□□□ -2.57
HOXD13P35453 RNU6-260P-201ENST00000384092 107 ntBASIC-1.01□□□□□ -2.57
HOXD13P35453 MIR203A-201ENST00000384836 110 ntBASIC-1.01□□□□□ -2.57
HOXD13P35453 MIR124-2-201ENST00000385081 109 ntBASIC-1.01□□□□□ -2.57
HOXD13P35453 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.01□□□□□ -2.57
HOXD13P35453 YWHAEP3-201ENST00000582767 121 ntBASIC-1.01□□□□□ -2.57
HOXD13P35453 MIR6509-201ENST00000614603 85 ntBASIC-1.01□□□□□ -2.57
HOXD13P35453 RNU6-81P-201ENST00000365608 104 ntBASIC-1.02□□□□□ -2.57
HOXD13P35453 AC026421.1-201ENST00000519101 163 ntBASIC-1.02□□□□□ -2.57
HOXD13P35453 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.03□□□□□ -2.57
HOXD13P35453 RNU6-30P-201ENST00000384561 107 ntBASIC-1.03□□□□□ -2.57
HOXD13P35453 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.03□□□□□ -2.57
HOXD13P35453 AL691482.2-201ENST00000457453 84 ntBASIC-1.03□□□□□ -2.57
HOXD13P35453 snoU13.17-201ENST00000458802 104 ntBASIC-1.03□□□□□ -2.57
HOXD13P35453 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.03□□□□□ -2.57
HOXD13P35453 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.03□□□□□ -2.57
HOXD13P35453 RNU6-824P-201ENST00000363724 104 ntBASIC-1.04□□□□□ -2.58
HOXD13P35453 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.04□□□□□ -2.58
HOXD13P35453 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.04□□□□□ -2.58
HOXD13P35453 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.04□□□□□ -2.58
HOXD13P35453 RNY1P9-201ENST00000532431 109 ntBASIC-1.04□□□□□ -2.58
HOXD13P35453 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.05□□□□□ -2.58
HOXD13P35453 RNU6-10P-201ENST00000384036 107 ntBASIC-1.05□□□□□ -2.58
HOXD13P35453 MIR590-201ENST00000385008 97 ntBASIC-1.05□□□□□ -2.58
HOXD13P35453 MIR548M-201ENST00000408260 86 ntBASIC-1.05□□□□□ -2.58
HOXD13P35453 MIR3115-201ENST00000577915 68 ntBASIC-1.05□□□□□ -2.58
HOXD13P35453 MIR4796-201ENST00000580742 81 ntBASIC-1.05□□□□□ -2.58
HOXD13P35453 AL353803.5-201ENST00000599815 141 ntBASIC-1.05□□□□□ -2.58
HOXD13P35453 RNU6-834P-201ENST00000362367 110 ntBASIC-1.06□□□□□ -2.58
HOXD13P35453 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.06□□□□□ -2.58
HOXD13P35453 MIR1236-201ENST00000408340 102 ntBASIC-1.06□□□□□ -2.58
HOXD13P35453 RNU7-61P-201ENST00000515897 61 ntBASIC-1.06□□□□□ -2.58
HOXD13P35453 AC090617.8-201ENST00000623339 167 ntBASIC-1.06□□□□□ -2.58
HOXD13P35453 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.07□□□□□ -2.58
HOXD13P35453 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.07□□□□□ -2.58
HOXD13P35453 RNU6-537P-201ENST00000517277 103 ntBASIC-1.07□□□□□ -2.58
HOXD13P35453 MIR3657-201ENST00000584818 117 ntBASIC-1.07□□□□□ -2.58
HOXD13P35453 AL365222.1-201ENST00000614661 98 ntBASIC-1.07□□□□□ -2.58
HOXD13P35453 SNORA2.1-201ENST00000363089 137 ntBASIC-1.08□□□□□ -2.58
HOXD13P35453 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.08□□□□□ -2.58
HOXD13P35453 SNORA33.1-201ENST00000364957 130 ntBASIC-1.08□□□□□ -2.58
HOXD13P35453 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.08□□□□□ -2.58
HOXD13P35453 RNU7-134P-201ENST00000458997 64 ntBASIC-1.08□□□□□ -2.58
HOXD13P35453 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.08□□□□□ -2.58
HOXD13P35453 RNA5SP192-201ENST00000364404 120 ntBASIC-1.09□□□□□ -2.58
HOXD13P35453 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.09□□□□□ -2.58
HOXD13P35453 SNORD114-17-201ENST00000364699 75 ntBASIC-1.09□□□□□ -2.58
HOXD13P35453 MIR1255B2-201ENST00000408618 67 ntBASIC-1.09□□□□□ -2.58
HOXD13P35453 snoU83B.1-201ENST00000517136 88 ntBASIC-1.09□□□□□ -2.58
HOXD13P35453 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.09□□□□□ -2.58
HOXD13P35453 RNU6-554P-201ENST00000410466 106 ntBASIC-1.1□□□□□ -2.59
HOXD13P35453 RNU6-162P-201ENST00000516228 103 ntBASIC-1.1□□□□□ -2.59
HOXD13P35453 RNU6-106P-201ENST00000384405 107 ntBASIC-1.11□□□□□ -2.59
HOXD13P35453 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.11□□□□□ -2.59
HOXD13P35453 RNU6-706P-201ENST00000517229 104 ntBASIC-1.11□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 222.2 ms