Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC026421.1-201ENST00000519101 163 ntBASIC-0.6□□□□□ -2.51
ABCD3P28288 SNORD56B-201ENST00000384713 71 ntBASIC-0.61□□□□□ -2.51
ABCD3P28288 MIR4280-201ENST00000582178 76 ntBASIC-0.61□□□□□ -2.51
ABCD3P28288 U7.3-201ENST00000616123 62 ntBASIC-0.61□□□□□ -2.51
ABCD3P28288 MIR2052-201ENST00000636055 55 ntBASIC-0.61□□□□□ -2.51
ABCD3P28288 AL031737.1-201ENST00000450125 223 ntBASIC-0.62□□□□□ -2.51
ABCD3P28288 MIR196A1-201ENST00000388006 70 ntBASIC-0.63□□□□□ -2.51
ABCD3P28288 MIR1236-201ENST00000408340 102 ntBASIC-0.63□□□□□ -2.51
ABCD3P28288 AL445193.1-201ENST00000441183 141 ntBASIC-0.63□□□□□ -2.51
ABCD3P28288 AL500527.2-201ENST00000454105 95 ntBASIC-0.63□□□□□ -2.51
ABCD3P28288 SNORD38.3-201ENST00000516599 73 ntBASIC-0.63□□□□□ -2.51
ABCD3P28288 AC006254.2-201ENST00000603259 279 ntBASIC-0.63□□□□□ -2.51
ABCD3P28288 SNORA63.6-201ENST00000364921 119 ntBASIC-0.64□□□□□ -2.51
ABCD3P28288 RNU6-721P-201ENST00000410155 105 ntBASIC-0.64□□□□□ -2.51
ABCD3P28288 RNU6-789P-201ENST00000517105 102 ntBASIC-0.64□□□□□ -2.51
ABCD3P28288 MIR548AX-201ENST00000580117 73 ntBASIC-0.64□□□□□ -2.51
ABCD3P28288 AC145423.2-201ENST00000610631 239 ntBASIC-0.64□□□□□ -2.51
ABCD3P28288 MIR409-201ENST00000362237 79 ntBASIC-0.65□□□□□ -2.51
ABCD3P28288 RNU6-901P-201ENST00000384593 106 ntBASIC-0.65□□□□□ -2.51
ABCD3P28288 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.65□□□□□ -2.51
ABCD3P28288 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.65□□□□□ -2.51
ABCD3P28288 SNORD114-25-201ENST00000363742 72 ntBASIC-0.66□□□□□ -2.52
ABCD3P28288 RNU7-55P-201ENST00000459426 62 ntBASIC-0.66□□□□□ -2.52
ABCD3P28288 RNU6-162P-201ENST00000516228 103 ntBASIC-0.66□□□□□ -2.52
ABCD3P28288 MIR4796-201ENST00000580742 81 ntBASIC-0.66□□□□□ -2.52
ABCD3P28288 AC093726.3-201ENST00000637588 150 ntBASIC-0.66□□□□□ -2.52
ABCD3P28288 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.67□□□□□ -2.52
ABCD3P28288 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.67□□□□□ -2.52
ABCD3P28288 MTATP8P2-201ENST00000435212 202 ntBASIC-0.67□□□□□ -2.52
ABCD3P28288 SNORD57-201ENST00000448188 72 ntBASIC-0.67□□□□□ -2.52
ABCD3P28288 AC097510.1-201ENST00000510945 133 ntBASIC-0.67□□□□□ -2.52
ABCD3P28288 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.68□□□□□ -2.52
ABCD3P28288 MT-TQ-201ENST00000387372 72 ntBASIC-0.68□□□□□ -2.52
ABCD3P28288 RNU6-881P-201ENST00000516813 102 ntBASIC-0.68□□□□□ -2.52
ABCD3P28288 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.69□□□□□ -2.52
ABCD3P28288 SNORD90-201ENST00000391145 111 ntBASIC-0.69□□□□□ -2.52
ABCD3P28288 AL606753.1-201ENST00000427435 87 ntBASIC-0.69□□□□□ -2.52
ABCD3P28288 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.7□□□□□ -2.52
ABCD3P28288 RNY4P18-201ENST00000391107 89 ntBASIC-0.7□□□□□ -2.52
ABCD3P28288 MIR6851-201ENST00000617060 67 ntBASIC-0.7□□□□□ -2.52
ABCD3P28288 RNU6-502P-201ENST00000362419 108 ntBASIC-0.71□□□□□ -2.52
ABCD3P28288 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.71□□□□□ -2.52
ABCD3P28288 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.71□□□□□ -2.52
ABCD3P28288 RNA5SP331-201ENST00000364986 107 ntBASIC-0.71□□□□□ -2.52
ABCD3P28288 RNY1P7-201ENST00000384743 110 ntBASIC-0.71□□□□□ -2.52
ABCD3P28288 snoU13.13-201ENST00000458842 104 ntBASIC-0.71□□□□□ -2.52
ABCD3P28288 MIR8068-201ENST00000618032 68 ntBASIC-0.71□□□□□ -2.52
ABCD3P28288 RNU6-973P-201ENST00000364690 107 ntBASIC-0.72□□□□□ -2.52
ABCD3P28288 RNU6-382P-201ENST00000365181 106 ntBASIC-0.72□□□□□ -2.52
ABCD3P28288 MIR204-201ENST00000385200 110 ntBASIC-0.72□□□□□ -2.52
ABCD3P28288 MIR5704-201ENST00000584029 77 ntBASIC-0.72□□□□□ -2.52
ABCD3P28288 SNORD83B-201ENST00000386745 93 ntBASIC-0.73□□□□□ -2.53
ABCD3P28288 RNA5SP266-201ENST00000410273 108 ntBASIC-0.73□□□□□ -2.53
ABCD3P28288 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.73□□□□□ -2.53
ABCD3P28288 RNY1P9-201ENST00000532431 109 ntBASIC-0.73□□□□□ -2.53
ABCD3P28288 MIR450A1-201ENST00000362262 91 ntBASIC-0.74□□□□□ -2.53
ABCD3P28288 RNU6-755P-201ENST00000364400 103 ntBASIC-0.74□□□□□ -2.53
ABCD3P28288 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.74□□□□□ -2.53
ABCD3P28288 RNU6-431P-201ENST00000383874 107 ntBASIC-0.74□□□□□ -2.53
ABCD3P28288 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.74□□□□□ -2.53
ABCD3P28288 RNU6-274P-201ENST00000459566 107 ntBASIC-0.74□□□□□ -2.53
ABCD3P28288 AC021146.9-201ENST00000512503 156 ntBASIC-0.74□□□□□ -2.53
ABCD3P28288 MIR4499-201ENST00000584834 69 ntBASIC-0.74□□□□□ -2.53
ABCD3P28288 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.74□□□□□ -2.53
ABCD3P28288 MIR4773-1-201ENST00000637203 78 ntBASIC-0.74□□□□□ -2.53
ABCD3P28288 RNU6-824P-201ENST00000363724 104 ntBASIC-0.75□□□□□ -2.53
ABCD3P28288 RNU6-990P-201ENST00000364385 104 ntBASIC-0.75□□□□□ -2.53
ABCD3P28288 MIR517B-201ENST00000385102 67 ntBASIC-0.75□□□□□ -2.53
ABCD3P28288 SCARNA17-201ENST00000516183 144 ntBASIC-0.75□□□□□ -2.53
ABCD3P28288 SNORA40.13-201ENST00000516379 120 ntBASIC-0.75□□□□□ -2.53
ABCD3P28288 MIR6773-201ENST00000612812 74 ntBASIC-0.75□□□□□ -2.53
ABCD3P28288 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.76□□□□□ -2.53
ABCD3P28288 MIR519C-201ENST00000385053 87 ntBASIC-0.76□□□□□ -2.53
ABCD3P28288 SNORD64-201ENST00000386683 67 ntBASIC-0.76□□□□□ -2.53
ABCD3P28288 SNORD22.1-201ENST00000516331 125 ntBASIC-0.76□□□□□ -2.53
ABCD3P28288 MIR3179-1-201ENST00000578940 84 ntBASIC-0.76□□□□□ -2.53
ABCD3P28288 MIR3179-2-201ENST00000579107 84 ntBASIC-0.76□□□□□ -2.53
ABCD3P28288 MIR3179-3-201ENST00000579566 84 ntBASIC-0.76□□□□□ -2.53
ABCD3P28288 MIR3179-4-201ENST00000617599 84 ntBASIC-0.76□□□□□ -2.53
ABCD3P28288 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.77□□□□□ -2.53
ABCD3P28288 snoU13.17-201ENST00000458802 104 ntBASIC-0.77□□□□□ -2.53
ABCD3P28288 AC021146.6-201ENST00000514659 117 ntBASIC-0.77□□□□□ -2.53
ABCD3P28288 RNU6-406P-201ENST00000516470 107 ntBASIC-0.77□□□□□ -2.53
ABCD3P28288 U6.81-201ENST00000612550 106 ntBASIC-0.77□□□□□ -2.53
ABCD3P28288 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.78□□□□□ -2.53
ABCD3P28288 Y_RNA.250-201ENST00000364542 110 ntBASIC-0.78□□□□□ -2.53
ABCD3P28288 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.78□□□□□ -2.53
ABCD3P28288 RNU6-260P-201ENST00000384092 107 ntBASIC-0.78□□□□□ -2.53
ABCD3P28288 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.78□□□□□ -2.53
ABCD3P28288 RNU6-905P-201ENST00000384434 107 ntBASIC-0.78□□□□□ -2.53
ABCD3P28288 SNORA13-201ENST00000458790 133 ntBASIC-0.78□□□□□ -2.53
ABCD3P28288 AP001318.4-201ENST00000616637 121 ntBASIC-0.78□□□□□ -2.53
ABCD3P28288 uc_338.19-201ENST00000616808 99 ntBASIC-0.78□□□□□ -2.53
ABCD3P28288 snoR1.1-201ENST00000628177 80 ntBASIC-0.78□□□□□ -2.53
ABCD3P28288 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.78□□□□□ -2.53
ABCD3P28288 AL450471.1-201ENST00000447509 127 ntBASIC-0.79□□□□□ -2.54
ABCD3P28288 AP000533.3-201ENST00000447704 118 ntBASIC-0.79□□□□□ -2.54
ABCD3P28288 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.79□□□□□ -2.54
ABCD3P28288 RNA5SP470-201ENST00000516463 106 ntBASIC-0.79□□□□□ -2.54
ABCD3P28288 SNORD115-37-201ENST00000363768 82 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 8.9 ms