Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 HAR1A.1-201ENST00000459583 118 ntBASIC0.79□□□□□ -2.28
LMNB1P20700 RNU6-411P-201ENST00000384451 107 ntBASIC0.78□□□□□ -2.28
LMNB1P20700 RNU6-540P-201ENST00000384622 101 ntBASIC0.78□□□□□ -2.28
LMNB1P20700 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.78□□□□□ -2.28
LMNB1P20700 RNU6-604P-201ENST00000390917 100 ntBASIC0.78□□□□□ -2.28
LMNB1P20700 RNU6-752P-201ENST00000516376 102 ntBASIC0.78□□□□□ -2.28
LMNB1P20700 RNA5SP147-201ENST00000516493 109 ntBASIC0.78□□□□□ -2.28
LMNB1P20700 MIR6509-201ENST00000614603 85 ntBASIC0.78□□□□□ -2.28
LMNB1P20700 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.78□□□□□ -2.28
LMNB1P20700 SNORD45.1-201ENST00000363181 77 ntBASIC0.77□□□□□ -2.29
LMNB1P20700 RNA5SP499-201ENST00000363982 119 ntBASIC0.77□□□□□ -2.29
LMNB1P20700 RNU6-587P-201ENST00000391282 106 ntBASIC0.77□□□□□ -2.29
LMNB1P20700 snoU13.13-201ENST00000458842 104 ntBASIC0.77□□□□□ -2.29
LMNB1P20700 RNU6-982P-201ENST00000516216 102 ntBASIC0.77□□□□□ -2.29
LMNB1P20700 RNU6-35P-201ENST00000384530 107 ntBASIC0.76□□□□□ -2.29
LMNB1P20700 MIR154-201ENST00000385243 84 ntBASIC0.76□□□□□ -2.29
LMNB1P20700 MIR652-201ENST00000385278 98 ntBASIC0.76□□□□□ -2.29
LMNB1P20700 AC073261.1-201ENST00000429409 121 ntBASIC0.76□□□□□ -2.29
LMNB1P20700 MIR5087-201ENST00000635826 76 ntBASIC0.76□□□□□ -2.29
LMNB1P20700 SNORD115-22-201ENST00000364456 82 ntBASIC0.75□□□□□ -2.29
LMNB1P20700 Y_RNA.407-201ENST00000383986 113 ntBASIC0.75□□□□□ -2.29
LMNB1P20700 SNORA68.3-201ENST00000515906 83 ntBASIC0.75□□□□□ -2.29
LMNB1P20700 MIR3657-201ENST00000584818 117 ntBASIC0.75□□□□□ -2.29
LMNB1P20700 AC114801.3-201ENST00000510231 177 ntBASIC0.74□□□□□ -2.29
LMNB1P20700 RNU6-229P-201ENST00000516614 102 ntBASIC0.74□□□□□ -2.29
LMNB1P20700 MIR5706-201ENST00000579841 80 ntBASIC0.74□□□□□ -2.29
LMNB1P20700 SNORD44.1-201ENST00000363202 61 ntBASIC0.73□□□□□ -2.29
LMNB1P20700 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.73□□□□□ -2.29
LMNB1P20700 RNU6-634P-201ENST00000459134 106 ntBASIC0.73□□□□□ -2.29
LMNB1P20700 SNORA2A-201ENST00000383885 135 ntBASIC0.72□□□□□ -2.29
LMNB1P20700 RNU6-260P-201ENST00000384092 107 ntBASIC0.72□□□□□ -2.29
LMNB1P20700 SNORD30.1-201ENST00000391309 70 ntBASIC0.72□□□□□ -2.29
LMNB1P20700 Y_RNA.125-201ENST00000363371 111 ntBASIC0.71□□□□□ -2.3
LMNB1P20700 MIR582-201ENST00000365731 98 ntBASIC0.71□□□□□ -2.3
LMNB1P20700 MIR501-201ENST00000390204 84 ntBASIC0.71□□□□□ -2.3
LMNB1P20700 MIR103A1-201ENST00000362165 78 ntBASIC0.7□□□□□ -2.3
LMNB1P20700 SCARNA17.3-201ENST00000516381 125 ntBASIC0.7□□□□□ -2.3
LMNB1P20700 AC243829.6-201ENST00000612652 106 ntBASIC0.7□□□□□ -2.3
LMNB1P20700 SNORD113.1-201ENST00000363280 73 ntBASIC0.69□□□□□ -2.3
LMNB1P20700 SNORD116-24-201ENST00000384549 92 ntBASIC0.69□□□□□ -2.3
LMNB1P20700 RNU6-881P-201ENST00000516813 102 ntBASIC0.69□□□□□ -2.3
LMNB1P20700 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.68□□□□□ -2.3
LMNB1P20700 Y_RNA.386-201ENST00000383913 105 ntBASIC0.68□□□□□ -2.3
LMNB1P20700 MIR760-201ENST00000390220 80 ntBASIC0.68□□□□□ -2.3
LMNB1P20700 RNU6-663P-201ENST00000391105 106 ntBASIC0.68□□□□□ -2.3
LMNB1P20700 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.68□□□□□ -2.3
LMNB1P20700 uc_338.17-201ENST00000619633 179 ntBASIC0.68□□□□□ -2.3
LMNB1P20700 VTRNA1-3-201ENST00000365645 89 ntBASIC0.67□□□□□ -2.3
LMNB1P20700 RNU6-649P-201ENST00000384463 107 ntBASIC0.67□□□□□ -2.3
LMNB1P20700 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
LMNB1P20700 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.66□□□□□ -2.3
LMNB1P20700 SNORD114-4-201ENST00000363962 75 ntBASIC0.66□□□□□ -2.3
LMNB1P20700 MIR548E-201ENST00000408287 88 ntBASIC0.66□□□□□ -2.3
LMNB1P20700 MIR4677-201ENST00000584153 80 ntBASIC0.66□□□□□ -2.3
LMNB1P20700 uc_338.10-201ENST00000621872 182 ntBASIC0.66□□□□□ -2.3
LMNB1P20700 MIRLET7D-201ENST00000362263 87 ntBASIC0.65□□□□□ -2.31
LMNB1P20700 SNORA2.1-201ENST00000363089 137 ntBASIC0.65□□□□□ -2.31
LMNB1P20700 RNU6-863P-201ENST00000515989 104 ntBASIC0.65□□□□□ -2.31
LMNB1P20700 RNU6-895P-201ENST00000384125 103 ntBASIC0.64□□□□□ -2.31
LMNB1P20700 SNORA62.5-201ENST00000516634 120 ntBASIC0.64□□□□□ -2.31
LMNB1P20700 U6.111-201ENST00000636093 83 ntBASIC0.64□□□□□ -2.31
LMNB1P20700 MIR499B-201ENST00000636498 73 ntBASIC0.64□□□□□ -2.31
LMNB1P20700 RNA5SP128-201ENST00000365305 116 ntBASIC0.63□□□□□ -2.31
LMNB1P20700 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
LMNB1P20700 RNU6-630P-201ENST00000391258 106 ntBASIC0.63□□□□□ -2.31
LMNB1P20700 RNU6-848P-201ENST00000515948 107 ntBASIC0.63□□□□□ -2.31
LMNB1P20700 RNU6-617P-201ENST00000516147 107 ntBASIC0.63□□□□□ -2.31
LMNB1P20700 RNU6-473P-201ENST00000516164 107 ntBASIC0.63□□□□□ -2.31
LMNB1P20700 RNU6-1049P-201ENST00000516414 107 ntBASIC0.63□□□□□ -2.31
LMNB1P20700 MIR4514-201ENST00000581410 57 ntBASIC0.63□□□□□ -2.31
LMNB1P20700 AC005520.4-201ENST00000604337 90 ntBASIC0.63□□□□□ -2.31
LMNB1P20700 RNU6-645P-201ENST00000364649 106 ntBASIC0.62□□□□□ -2.31
LMNB1P20700 RNU6-800P-201ENST00000384473 103 ntBASIC0.62□□□□□ -2.31
LMNB1P20700 MIR9-2-201ENST00000384838 87 ntBASIC0.62□□□□□ -2.31
LMNB1P20700 MIR516B1-201ENST00000385211 90 ntBASIC0.62□□□□□ -2.31
LMNB1P20700 RNA5SP63-201ENST00000391225 112 ntBASIC0.62□□□□□ -2.31
LMNB1P20700 MIR1265-201ENST00000408444 86 ntBASIC0.62□□□□□ -2.31
LMNB1P20700 AC114737.2-201ENST00000421583 173 ntBASIC0.62□□□□□ -2.31
LMNB1P20700 RNU6-871P-201ENST00000516122 100 ntBASIC0.62□□□□□ -2.31
LMNB1P20700 RNU7-129P-201ENST00000516128 62 ntBASIC0.62□□□□□ -2.31
LMNB1P20700 RNA5SP285-201ENST00000516619 119 ntBASIC0.62□□□□□ -2.31
LMNB1P20700 RNU6-539P-201ENST00000516665 103 ntBASIC0.62□□□□□ -2.31
LMNB1P20700 MIR548AD-201ENST00000584780 82 ntBASIC0.62□□□□□ -2.31
LMNB1P20700 MIR6086-201ENST00000638065 55 ntBASIC0.62□□□□□ -2.31
LMNB1P20700 Y_RNA.340-201ENST00000365330 92 ntBASIC0.61□□□□□ -2.31
LMNB1P20700 RNU6-788P-201ENST00000390967 104 ntBASIC0.61□□□□□ -2.31
LMNB1P20700 U7.6-201ENST00000610841 64 ntBASIC0.61□□□□□ -2.31
LMNB1P20700 RNU6-656P-201ENST00000516785 107 ntBASIC0.6□□□□□ -2.31
LMNB1P20700 RNU7-188P-201ENST00000517063 64 ntBASIC0.6□□□□□ -2.31
LMNB1P20700 MIR3925-201ENST00000584674 77 ntBASIC0.6□□□□□ -2.31
LMNB1P20700 MIR8053-201ENST00000613344 75 ntBASIC0.6□□□□□ -2.31
LMNB1P20700 AC090617.8-201ENST00000623339 167 ntBASIC0.6□□□□□ -2.31
LMNB1P20700 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
LMNB1P20700 RNU6-1216P-201ENST00000362590 107 ntBASIC0.59□□□□□ -2.31
LMNB1P20700 AC023932.2-201ENST00000603176 175 ntBASIC0.59□□□□□ -2.31
LMNB1P20700 SNORA33.1-201ENST00000364957 130 ntBASIC0.58□□□□□ -2.32
LMNB1P20700 RNU6-815P-201ENST00000384080 113 ntBASIC0.58□□□□□ -2.32
LMNB1P20700 Y_RNA.443-201ENST00000384135 111 ntBASIC0.58□□□□□ -2.32
LMNB1P20700 AC021146.9-201ENST00000512503 156 ntBASIC0.58□□□□□ -2.32
LMNB1P20700 SNORA63.6-201ENST00000364921 119 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms