Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.67□□□□□ -2.68
HLA-DPA1P20036 RNU6-479P-201ENST00000516348 105 ntBASIC-1.67□□□□□ -2.68
HLA-DPA1P20036 RNU4-32P-201ENST00000363404 141 ntBASIC-1.68□□□□□ -2.68
HLA-DPA1P20036 MIR4777-201ENST00000583710 86 ntBASIC-1.68□□□□□ -2.68
HLA-DPA1P20036 RNU6-746P-201ENST00000384112 109 ntBASIC-1.69□□□□□ -2.68
HLA-DPA1P20036 RNU6-795P-201ENST00000516323 103 ntBASIC-1.69□□□□□ -2.68
HLA-DPA1P20036 MIR4320-201ENST00000636981 65 ntBASIC-1.69□□□□□ -2.68
HLA-DPA1P20036 RNU6-382P-201ENST00000365181 106 ntBASIC-1.7□□□□□ -2.68
HLA-DPA1P20036 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.7□□□□□ -2.68
HLA-DPA1P20036 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.7□□□□□ -2.68
HLA-DPA1P20036 SNORD90-201ENST00000391145 111 ntBASIC-1.7□□□□□ -2.68
HLA-DPA1P20036 RNU6-260P-201ENST00000384092 107 ntBASIC-1.71□□□□□ -2.68
HLA-DPA1P20036 MIR29B1-201ENST00000385015 81 ntBASIC-1.71□□□□□ -2.68
HLA-DPA1P20036 RNU7-200P-201ENST00000516105 62 ntBASIC-1.71□□□□□ -2.68
HLA-DPA1P20036 MIR3914-2-201ENST00000637339 95 ntBASIC-1.71□□□□□ -2.68
HLA-DPA1P20036 MIR548A3-201ENST00000385297 97 ntBASIC-1.72□□□□□ -2.68
HLA-DPA1P20036 MIR548I1-201ENST00000408810 149 ntBASIC-1.72□□□□□ -2.68
HLA-DPA1P20036 RNU6-706P-201ENST00000517229 104 ntBASIC-1.72□□□□□ -2.68
HLA-DPA1P20036 MIR4719-201ENST00000585233 84 ntBASIC-1.72□□□□□ -2.68
HLA-DPA1P20036 AC012531.4-201ENST00000616509 177 ntBASIC-1.72□□□□□ -2.68
HLA-DPA1P20036 MIR6818-201ENST00000621576 65 ntBASIC-1.72□□□□□ -2.68
HLA-DPA1P20036 MIR4773-1-201ENST00000637203 78 ntBASIC-1.72□□□□□ -2.68
HLA-DPA1P20036 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.73□□□□□ -2.69
HLA-DPA1P20036 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.73□□□□□ -2.69
HLA-DPA1P20036 SNX3P1X-201ENST00000414887 175 ntBASIC-1.73□□□□□ -2.69
HLA-DPA1P20036 SNORD63.1-201ENST00000516178 80 ntBASIC-1.73□□□□□ -2.69
HLA-DPA1P20036 RNA5SP147-201ENST00000516493 109 ntBASIC-1.73□□□□□ -2.69
HLA-DPA1P20036 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.73□□□□□ -2.69
HLA-DPA1P20036 RNU5F-1-201ENST00000362507 117 ntBASIC-1.74□□□□□ -2.69
HLA-DPA1P20036 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
HLA-DPA1P20036 SNORA26.4-201ENST00000391188 123 ntBASIC-1.74□□□□□ -2.69
HLA-DPA1P20036 RNU2-51P-201ENST00000410708 197 ntBASIC-1.74□□□□□ -2.69
HLA-DPA1P20036 snoU13.17-201ENST00000458802 104 ntBASIC-1.74□□□□□ -2.69
HLA-DPA1P20036 SNORD33.1-201ENST00000516213 88 ntBASIC-1.74□□□□□ -2.69
HLA-DPA1P20036 RNU6-971P-201ENST00000516920 106 ntBASIC-1.74□□□□□ -2.69
HLA-DPA1P20036 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.74□□□□□ -2.69
HLA-DPA1P20036 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.75□□□□□ -2.69
HLA-DPA1P20036 MIR6509-201ENST00000614603 85 ntBASIC-1.75□□□□□ -2.69
HLA-DPA1P20036 U6.95-201ENST00000636931 70 ntBASIC-1.75□□□□□ -2.69
HLA-DPA1P20036 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.76□□□□□ -2.69
HLA-DPA1P20036 MIR8485-201ENST00000401372 91 ntBASIC-1.76□□□□□ -2.69
HLA-DPA1P20036 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.76□□□□□ -2.69
HLA-DPA1P20036 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.76□□□□□ -2.69
HLA-DPA1P20036 AC099654.10-201ENST00000640395 161 ntBASIC-1.76□□□□□ -2.69
HLA-DPA1P20036 MIR203A-201ENST00000384836 110 ntBASIC-1.77□□□□□ -2.69
HLA-DPA1P20036 RNU6-972P-201ENST00000391208 107 ntBASIC-1.77□□□□□ -2.69
HLA-DPA1P20036 SNORD115-33-201ENST00000363723 82 ntBASIC-1.78□□□□□ -2.69
HLA-DPA1P20036 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.78□□□□□ -2.69
HLA-DPA1P20036 SNORA33.1-201ENST00000364957 130 ntBASIC-1.78□□□□□ -2.69
HLA-DPA1P20036 RNU6-80P-201ENST00000384195 107 ntBASIC-1.78□□□□□ -2.69
HLA-DPA1P20036 MIR527-201ENST00000385244 85 ntBASIC-1.78□□□□□ -2.69
HLA-DPA1P20036 RNU6-576P-201ENST00000390854 102 ntBASIC-1.78□□□□□ -2.69
HLA-DPA1P20036 MIR1255B2-201ENST00000408618 67 ntBASIC-1.78□□□□□ -2.69
HLA-DPA1P20036 AC138207.3-201ENST00000585289 166 ntBASIC-1.78□□□□□ -2.69
HLA-DPA1P20036 RNU6-924P-201ENST00000362926 108 ntBASIC-1.79□□□□□ -2.7
HLA-DPA1P20036 RNU6-824P-201ENST00000363724 104 ntBASIC-1.79□□□□□ -2.7
HLA-DPA1P20036 SNORD58A-201ENST00000383875 65 ntBASIC-1.79□□□□□ -2.7
HLA-DPA1P20036 RNU4-61P-201ENST00000411243 107 ntBASIC-1.79□□□□□ -2.7
HLA-DPA1P20036 SNORD115-22-201ENST00000364456 82 ntBASIC-1.8□□□□□ -2.7
HLA-DPA1P20036 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.8□□□□□ -2.7
HLA-DPA1P20036 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.8□□□□□ -2.7
HLA-DPA1P20036 AL691482.2-201ENST00000457453 84 ntBASIC-1.8□□□□□ -2.7
HLA-DPA1P20036 SCARNA23-201ENST00000516060 130 ntBASIC-1.8□□□□□ -2.7
HLA-DPA1P20036 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.8□□□□□ -2.7
HLA-DPA1P20036 MIR198-201ENST00000637333 62 ntBASIC-1.8□□□□□ -2.7
HLA-DPA1P20036 SNORA2.1-201ENST00000363089 137 ntBASIC-1.81□□□□□ -2.7
HLA-DPA1P20036 RNU6-887P-201ENST00000410660 100 ntBASIC-1.81□□□□□ -2.7
HLA-DPA1P20036 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.82□□□□□ -2.7
HLA-DPA1P20036 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.82□□□□□ -2.7
HLA-DPA1P20036 MIR889-201ENST00000401280 79 ntBASIC-1.82□□□□□ -2.7
HLA-DPA1P20036 AC026421.1-201ENST00000519101 163 ntBASIC-1.82□□□□□ -2.7
HLA-DPA1P20036 MIR3657-201ENST00000584818 117 ntBASIC-1.82□□□□□ -2.7
HLA-DPA1P20036 RNA5SP26-201ENST00000362406 119 ntBASIC-1.83□□□□□ -2.7
HLA-DPA1P20036 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.83□□□□□ -2.7
HLA-DPA1P20036 RNU6-346P-201ENST00000516288 111 ntBASIC-1.83□□□□□ -2.7
HLA-DPA1P20036 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.84□□□□□ -2.7
HLA-DPA1P20036 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.84□□□□□ -2.7
HLA-DPA1P20036 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.84□□□□□ -2.7
HLA-DPA1P20036 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.84□□□□□ -2.7
HLA-DPA1P20036 RNU6-412P-201ENST00000516434 106 ntBASIC-1.84□□□□□ -2.7
HLA-DPA1P20036 CYP3A54P-201ENST00000566950 75 ntBASIC-1.84□□□□□ -2.7
HLA-DPA1P20036 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.84□□□□□ -2.7
HLA-DPA1P20036 RNU6-659P-201ENST00000516454 104 ntBASIC-1.85□□□□□ -2.71
HLA-DPA1P20036 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.87□□□□□ -2.71
HLA-DPA1P20036 SNORA19.1-201ENST00000410656 129 ntBASIC-1.87□□□□□ -2.71
HLA-DPA1P20036 HLA-S-202ENST00000425174 53 ntBASIC-1.87□□□□□ -2.71
HLA-DPA1P20036 RNU6-904P-201ENST00000516206 101 ntBASIC-1.87□□□□□ -2.71
HLA-DPA1P20036 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.87□□□□□ -2.71
HLA-DPA1P20036 AC091912.2-201ENST00000624798 167 ntBASIC-1.87□□□□□ -2.71
HLA-DPA1P20036 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.87□□□□□ -2.71
HLA-DPA1P20036 RNY1P5-201ENST00000383890 115 ntBASIC-1.88□□□□□ -2.71
HLA-DPA1P20036 RNU6-880P-201ENST00000384526 107 ntBASIC-1.88□□□□□ -2.71
HLA-DPA1P20036 MIR4796-201ENST00000580742 81 ntBASIC-1.88□□□□□ -2.71
HLA-DPA1P20036 SNORD116-10-201ENST00000363791 102 ntBASIC-1.89□□□□□ -2.71
HLA-DPA1P20036 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.89□□□□□ -2.71
HLA-DPA1P20036 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.89□□□□□ -2.71
HLA-DPA1P20036 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.89□□□□□ -2.71
HLA-DPA1P20036 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.89□□□□□ -2.71
HLA-DPA1P20036 AL353691.2-201ENST00000443795 59 ntBASIC-1.89□□□□□ -2.71
HLA-DPA1P20036 RNA5SP461-201ENST00000516451 104 ntBASIC-1.89□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 177.5 ms