Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 RNU6-542P-201ENST00000516405 103 ntBASIC1.01□□□□□ -2.25
PTPRAP18433 AC092634.7-201ENST00000621022 103 ntBASIC1.01□□□□□ -2.25
PTPRAP18433 MIR521-2-201ENST00000384818 87 ntBASIC1□□□□□ -2.25
PTPRAP18433 MIR548E-201ENST00000408287 88 ntBASIC1□□□□□ -2.25
PTPRAP18433 AC110620.1-201ENST00000416042 228 ntBASIC1□□□□□ -2.25
PTPRAP18433 HMGN2P22-201ENST00000427588 175 ntBASIC1□□□□□ -2.25
PTPRAP18433 RNU6-1089P-201ENST00000516473 104 ntBASIC1□□□□□ -2.25
PTPRAP18433 MIR4714-201ENST00000580728 77 ntBASIC1□□□□□ -2.25
PTPRAP18433 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1□□□□□ -2.25
PTPRAP18433 RNA5SP325-201ENST00000363756 130 ntBASIC0.99□□□□□ -2.25
PTPRAP18433 SNORA63.6-201ENST00000364921 119 ntBASIC0.99□□□□□ -2.25
PTPRAP18433 RNA5SP299-201ENST00000391203 116 ntBASIC0.98□□□□□ -2.25
PTPRAP18433 Y_RNA.633-201ENST00000459107 95 ntBASIC0.98□□□□□ -2.25
PTPRAP18433 SNORA33.1-201ENST00000364957 130 ntBASIC0.97□□□□□ -2.25
PTPRAP18433 MIR548C-201ENST00000384815 97 ntBASIC0.97□□□□□ -2.25
PTPRAP18433 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
PTPRAP18433 uc_338.10-201ENST00000621872 182 ntBASIC0.97□□□□□ -2.25
PTPRAP18433 RNA5SP215-201ENST00000363440 122 ntBASIC0.96□□□□□ -2.26
PTPRAP18433 SNORD118-201ENST00000363593 134 ntBASIC0.96□□□□□ -2.26
PTPRAP18433 RNU6-669P-201ENST00000365575 107 ntBASIC0.96□□□□□ -2.26
PTPRAP18433 RN7SL793P-201ENST00000583259 296 ntBASIC0.96□□□□□ -2.26
PTPRAP18433 MIR548V-201ENST00000584165 80 ntBASIC0.96□□□□□ -2.26
PTPRAP18433 SNORA15B-2-201ENST00000384058 135 ntBASIC0.95□□□□□ -2.26
PTPRAP18433 SNORA15B-1-201ENST00000384334 135 ntBASIC0.95□□□□□ -2.26
PTPRAP18433 SNORA40.8-201ENST00000411034 126 ntBASIC0.95□□□□□ -2.26
PTPRAP18433 SCARNA21.1-201ENST00000515996 128 ntBASIC0.95□□□□□ -2.26
PTPRAP18433 MIR5706-201ENST00000579841 80 ntBASIC0.95□□□□□ -2.26
PTPRAP18433 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
PTPRAP18433 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.94□□□□□ -2.26
PTPRAP18433 MIR216A-201ENST00000385063 110 ntBASIC0.93□□□□□ -2.26
PTPRAP18433 RNU4-54P-201ENST00000516428 129 ntBASIC0.93□□□□□ -2.26
PTPRAP18433 Y_RNA.125-201ENST00000363371 111 ntBASIC0.92□□□□□ -2.26
PTPRAP18433 Y_RNA.423-201ENST00000384057 113 ntBASIC0.92□□□□□ -2.26
PTPRAP18433 SNORD71-201ENST00000411292 86 ntBASIC0.92□□□□□ -2.26
PTPRAP18433 SNORA25.5-201ENST00000363782 126 ntBASIC0.91□□□□□ -2.26
PTPRAP18433 RNU6-499P-201ENST00000365615 107 ntBASIC0.91□□□□□ -2.26
PTPRAP18433 RNU6-110P-201ENST00000384508 104 ntBASIC0.91□□□□□ -2.26
PTPRAP18433 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.91□□□□□ -2.26
PTPRAP18433 RNU6-351P-201ENST00000516097 100 ntBASIC0.91□□□□□ -2.26
PTPRAP18433 RNU6-1232P-201ENST00000516299 86 ntBASIC0.91□□□□□ -2.26
PTPRAP18433 U2.7-201ENST00000619197 100 ntBASIC0.91□□□□□ -2.26
PTPRAP18433 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.9□□□□□ -2.27
PTPRAP18433 RNA5SP192-201ENST00000364404 120 ntBASIC0.9□□□□□ -2.27
PTPRAP18433 SNORA2A-201ENST00000383885 135 ntBASIC0.9□□□□□ -2.27
PTPRAP18433 MIR518A1-201ENST00000385068 85 ntBASIC0.9□□□□□ -2.27
PTPRAP18433 PSMC1P5-201ENST00000512850 177 ntBASIC0.9□□□□□ -2.27
PTPRAP18433 RNU6-229P-201ENST00000516614 102 ntBASIC0.9□□□□□ -2.27
PTPRAP18433 MIR6513-201ENST00000621188 64 ntBASIC0.9□□□□□ -2.27
PTPRAP18433 SNORD114-2-201ENST00000363953 78 ntBASIC0.89□□□□□ -2.27
PTPRAP18433 RNU6-302P-201ENST00000365249 107 ntBASIC0.89□□□□□ -2.27
PTPRAP18433 AL590095.2-201ENST00000604136 117 ntBASIC0.89□□□□□ -2.27
PTPRAP18433 MIR6835-201ENST00000621552 64 ntBASIC0.89□□□□□ -2.27
PTPRAP18433 MIR633-201ENST00000384821 98 ntBASIC0.88□□□□□ -2.27
PTPRAP18433 MIR508-201ENST00000384857 115 ntBASIC0.88□□□□□ -2.27
PTPRAP18433 MIR630-201ENST00000384957 97 ntBASIC0.88□□□□□ -2.27
PTPRAP18433 MIR20A-201ENST00000362279 71 ntBASIC0.87□□□□□ -2.27
PTPRAP18433 MIR516B1-201ENST00000385211 90 ntBASIC0.87□□□□□ -2.27
PTPRAP18433 AC244090.1-201ENST00000441884 93 ntBASIC0.87□□□□□ -2.27
PTPRAP18433 U7.6-201ENST00000610841 64 ntBASIC0.87□□□□□ -2.27
PTPRAP18433 MIR6755-201ENST00000619993 66 ntBASIC0.87□□□□□ -2.27
PTPRAP18433 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.86□□□□□ -2.27
PTPRAP18433 RNU7-174P-201ENST00000516248 59 ntBASIC0.86□□□□□ -2.27
PTPRAP18433 U6.96-201ENST00000636425 70 ntBASIC0.86□□□□□ -2.27
PTPRAP18433 MIR517B-201ENST00000385102 67 ntBASIC0.85□□□□□ -2.27
PTPRAP18433 SNORA75.1-201ENST00000391130 148 ntBASIC0.85□□□□□ -2.27
PTPRAP18433 MIR936-201ENST00000401264 98 ntBASIC0.85□□□□□ -2.27
PTPRAP18433 MTND4LP19-201ENST00000403051 166 ntBASIC0.85□□□□□ -2.27
PTPRAP18433 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
PTPRAP18433 MIR501-201ENST00000390204 84 ntBASIC0.84□□□□□ -2.27
PTPRAP18433 RPL39P28-201ENST00000465655 155 ntBASIC0.84□□□□□ -2.27
PTPRAP18433 RNU7-188P-201ENST00000517063 64 ntBASIC0.84□□□□□ -2.27
PTPRAP18433 RNU6-92P-201ENST00000605893 104 ntBASIC0.84□□□□□ -2.27
PTPRAP18433 SNORD114-29-201ENST00000364819 70 ntBASIC0.83□□□□□ -2.28
PTPRAP18433 AC098934.3-201ENST00000430450 190 ntBASIC0.83□□□□□ -2.28
PTPRAP18433 MIR466-201ENST00000580653 84 ntBASIC0.83□□□□□ -2.28
PTPRAP18433 MIR4677-201ENST00000584153 80 ntBASIC0.83□□□□□ -2.28
PTPRAP18433 AC243829.6-201ENST00000612652 106 ntBASIC0.83□□□□□ -2.28
PTPRAP18433 AC090617.8-201ENST00000623339 167 ntBASIC0.83□□□□□ -2.28
PTPRAP18433 RNU6-940P-201ENST00000363433 104 ntBASIC0.82□□□□□ -2.28
PTPRAP18433 RNU6-698P-201ENST00000363523 107 ntBASIC0.82□□□□□ -2.28
PTPRAP18433 RNU6-34P-201ENST00000364874 107 ntBASIC0.82□□□□□ -2.28
PTPRAP18433 MIR760-201ENST00000390220 80 ntBASIC0.82□□□□□ -2.28
PTPRAP18433 CYP3A54P-201ENST00000566950 75 ntBASIC0.82□□□□□ -2.28
PTPRAP18433 U4.4-201ENST00000620626 117 ntBASIC0.81□□□□□ -2.28
PTPRAP18433 RNU6-1079P-201ENST00000362861 110 ntBASIC0.8□□□□□ -2.28
PTPRAP18433 RNA5SP193-201ENST00000410353 107 ntBASIC0.8□□□□□ -2.28
PTPRAP18433 AC079150.2-201ENST00000443733 78 ntBASIC0.8□□□□□ -2.28
PTPRAP18433 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
PTPRAP18433 SNORA49-201ENST00000386157 136 ntBASIC0.79□□□□□ -2.28
PTPRAP18433 SNORD113-2-201ENST00000391082 72 ntBASIC0.79□□□□□ -2.28
PTPRAP18433 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.79□□□□□ -2.28
PTPRAP18433 SNORD60.1-201ENST00000362451 73 ntBASIC0.78□□□□□ -2.28
PTPRAP18433 RNU6-945P-201ENST00000383947 107 ntBASIC0.78□□□□□ -2.28
PTPRAP18433 RNU6-848P-201ENST00000515948 107 ntBASIC0.78□□□□□ -2.28
PTPRAP18433 RNU6-617P-201ENST00000516147 107 ntBASIC0.78□□□□□ -2.28
PTPRAP18433 RNU6-473P-201ENST00000516164 107 ntBASIC0.78□□□□□ -2.28
PTPRAP18433 RNU6-1049P-201ENST00000516414 107 ntBASIC0.78□□□□□ -2.28
PTPRAP18433 RNU6-122P-201ENST00000516818 107 ntBASIC0.78□□□□□ -2.28
PTPRAP18433 RNU6-175P-201ENST00000516896 107 ntBASIC0.78□□□□□ -2.28
PTPRAP18433 MIR548AD-201ENST00000584780 82 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms