Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 Y_RNA.206-201ENST00000364136 102 ntBASIC-6.28□□□□□ -3.41
TOP2AP11388 RNU6-422P-201ENST00000384632 107 ntBASIC-6.28□□□□□ -3.41
TOP2AP11388 AL451105.1-201ENST00000450005 189 ntBASIC-6.28□□□□□ -3.41
TOP2AP11388 Y_RNA.213-201ENST00000364178 111 ntBASIC-6.29□□□□□ -3.42
TOP2AP11388 Y_RNA.646-201ENST00000410980 101 ntBASIC-6.29□□□□□ -3.42
TOP2AP11388 SNORD45.1-201ENST00000363181 77 ntBASIC-6.3□□□□□ -3.42
TOP2AP11388 Y_RNA.198-201ENST00000364013 98 ntBASIC-6.3□□□□□ -3.42
TOP2AP11388 RNU6-742P-201ENST00000365289 107 ntBASIC-6.3□□□□□ -3.42
TOP2AP11388 RNU7-66P-201ENST00000459469 62 ntBASIC-6.3□□□□□ -3.42
TOP2AP11388 MIR3658-201ENST00000636291 56 ntBASIC-6.3□□□□□ -3.42
TOP2AP11388 MIR628-201ENST00000385229 95 ntBASIC-6.3□□□□□ -3.42
TOP2AP11388 SNORA40.3-201ENST00000390964 122 ntBASIC-6.3□□□□□ -3.42
TOP2AP11388 Y_RNA.594-201ENST00000410373 140 ntBASIC-6.3□□□□□ -3.42
TOP2AP11388 RNU6-1050P-201ENST00000410388 107 ntBASIC-6.3□□□□□ -3.42
TOP2AP11388 SNORD18B-201ENST00000365659 72 ntBASIC-6.31□□□□□ -3.42
TOP2AP11388 RNU6-604P-201ENST00000390917 100 ntBASIC-6.31□□□□□ -3.42
TOP2AP11388 RNA5SP449-201ENST00000516871 130 ntBASIC-6.31□□□□□ -3.42
TOP2AP11388 Y_RNA.435-201ENST00000384095 112 ntBASIC-6.32□□□□□ -3.42
TOP2AP11388 Y_RNA.530-201ENST00000384587 101 ntBASIC-6.32□□□□□ -3.42
TOP2AP11388 Y_RNA.260-201ENST00000364628 101 ntBASIC-6.33□□□□□ -3.42
TOP2AP11388 MIR1236-201ENST00000408340 102 ntBASIC-6.33□□□□□ -3.42
TOP2AP11388 RNU6-493P-201ENST00000391321 108 ntBASIC-6.34□□□□□ -3.42
TOP2AP11388 RNU7-4P-201ENST00000516961 62 ntBASIC-6.34□□□□□ -3.42
TOP2AP11388 RNU6-1119P-201ENST00000384349 108 ntBASIC-6.35□□□□□ -3.43
TOP2AP11388 AC080013.6-201ENST00000606185 215 ntBASIC-6.35□□□□□ -3.43
TOP2AP11388 RNU6-818P-201ENST00000364837 108 ntBASIC-6.35□□□□□ -3.43
TOP2AP11388 SNORD116-1-201ENST00000384335 95 ntBASIC-6.35□□□□□ -3.43
TOP2AP11388 Y_RNA.264-201ENST00000364665 102 ntBASIC-6.36□□□□□ -3.43
TOP2AP11388 Y_RNA.335-201ENST00000365299 96 ntBASIC-6.36□□□□□ -3.43
TOP2AP11388 RNU6-381P-201ENST00000391259 108 ntBASIC-6.36□□□□□ -3.43
TOP2AP11388 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-6.36□□□□□ -3.43
TOP2AP11388 MIR548AB-201ENST00000584917 84 ntBASIC-6.36□□□□□ -3.43
TOP2AP11388 MIR3662-201ENST00000637030 95 ntBASIC-6.36□□□□□ -3.43
TOP2AP11388 RNU6-836P-201ENST00000362920 107 ntBASIC-6.37□□□□□ -3.43
TOP2AP11388 RNU4-85P-201ENST00000364675 123 ntBASIC-6.37□□□□□ -3.43
TOP2AP11388 MIR4999-201ENST00000585029 91 ntBASIC-6.37□□□□□ -3.43
TOP2AP11388 AP000240.1-201ENST00000609910 452 ntBASIC-6.37□□□□□ -3.43
TOP2AP11388 AC068137.3-201ENST00000639191 341 ntBASIC-6.37□□□□□ -3.43
TOP2AP11388 RNU6-1318P-201ENST00000365389 103 ntBASIC-6.38□□□□□ -3.43
TOP2AP11388 AC025253.1-201ENST00000613623 543 ntBASIC-6.38□□□□□ -3.43
TOP2AP11388 RNU6-788P-201ENST00000390967 104 ntBASIC-6.39□□□□□ -3.43
TOP2AP11388 Y_RNA.615-201ENST00000410769 117 ntBASIC-6.39□□□□□ -3.43
TOP2AP11388 RNU6-1338P-201ENST00000516328 91 ntBASIC-6.39□□□□□ -3.43
TOP2AP11388 RNU6-182P-201ENST00000516970 105 ntBASIC-6.39□□□□□ -3.43
TOP2AP11388 RNU6-307P-201ENST00000516743 106 ntBASIC-6.4□□□□□ -3.43
TOP2AP11388 RNU6-1134P-201ENST00000365156 101 ntBASIC-6.4□□□□□ -3.43
TOP2AP11388 Y_RNA.414-201ENST00000384011 101 ntBASIC-6.4□□□□□ -3.43
TOP2AP11388 MTND4LP30-201ENST00000454092 297 ntBASIC-6.4□□□□□ -3.43
TOP2AP11388 RNU6-330P-201ENST00000363015 107 ntBASIC-6.41□□□□□ -3.44
TOP2AP11388 Y_RNA.402-201ENST00000383972 102 ntBASIC-6.42□□□□□ -3.44
TOP2AP11388 SNORD116.2-201ENST00000391251 93 ntBASIC-6.42□□□□□ -3.44
TOP2AP11388 RNU6-789P-201ENST00000517105 102 ntBASIC-6.42□□□□□ -3.44
TOP2AP11388 MIR4694-201ENST00000578534 80 ntBASIC-6.42□□□□□ -3.44
TOP2AP11388 MIR4744-201ENST00000581563 82 ntBASIC-6.42□□□□□ -3.44
TOP2AP11388 SNORD113-8-201ENST00000363497 74 ntBASIC-6.43□□□□□ -3.44
TOP2AP11388 SNORD115.2-201ENST00000391126 59 ntBASIC-6.43□□□□□ -3.44
TOP2AP11388 RNU6-566P-201ENST00000516790 107 ntBASIC-6.44□□□□□ -3.44
TOP2AP11388 RNU6-1088P-201ENST00000516850 104 ntBASIC-6.44□□□□□ -3.44
TOP2AP11388 Y_RNA.713-201ENST00000517013 96 ntBASIC-6.44□□□□□ -3.44
TOP2AP11388 SNORD45B-201ENST00000364617 72 ntBASIC-6.45□□□□□ -3.44
TOP2AP11388 RNU6-1068P-201ENST00000410958 103 ntBASIC-6.45□□□□□ -3.44
TOP2AP11388 MIR3613-201ENST00000579844 87 ntBASIC-6.45□□□□□ -3.44
TOP2AP11388 Y_RNA.95-201ENST00000363079 95 ntBASIC-6.45□□□□□ -3.44
TOP2AP11388 RNU6-1090P-201ENST00000364065 94 ntBASIC-6.45□□□□□ -3.44
TOP2AP11388 RNU6-578P-201ENST00000390980 103 ntBASIC-6.45□□□□□ -3.44
TOP2AP11388 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-6.45□□□□□ -3.44
TOP2AP11388 RNU7-153P-201ENST00000516455 62 ntBASIC-6.45□□□□□ -3.44
TOP2AP11388 AC138305.3-201ENST00000624988 240 ntBASIC-6.45□□□□□ -3.44
TOP2AP11388 RNU6-500P-201ENST00000362349 107 ntBASIC-6.46□□□□□ -3.44
TOP2AP11388 SNORA40B-201ENST00000385573 128 ntBASIC-6.46□□□□□ -3.44
TOP2AP11388 MIR3913-1-201ENST00000577744 102 ntBASIC-6.46□□□□□ -3.44
TOP2AP11388 DLEU2_1.2-201ENST00000614667 120 ntBASIC-6.46□□□□□ -3.44
TOP2AP11388 Y_RNA.563-201ENST00000384707 108 ntBASIC-6.47□□□□□ -3.45
TOP2AP11388 Y_RNA.599-201ENST00000410489 109 ntBASIC-6.48□□□□□ -3.45
TOP2AP11388 MTCO2P19-201ENST00000427513 598 ntBASIC-6.48□□□□□ -3.45
TOP2AP11388 SNORD42A-201ENST00000459584 64 ntBASIC-6.48□□□□□ -3.45
TOP2AP11388 U6.104-201ENST00000637979 90 ntBASIC-6.48□□□□□ -3.45
TOP2AP11388 MTND1P19-201ENST00000511780 315 ntBASIC-6.49□□□□□ -3.45
TOP2AP11388 RNU6-1016P-201ENST00000516689 94 ntBASIC-6.49□□□□□ -3.45
TOP2AP11388 RNU6-264P-201ENST00000517134 104 ntBASIC-6.49□□□□□ -3.45
TOP2AP11388 Y_RNA.560-201ENST00000384689 102 ntBASIC-6.5□□□□□ -3.45
TOP2AP11388 RNU6-648P-201ENST00000410190 107 ntBASIC-6.5□□□□□ -3.45
TOP2AP11388 U8.20-201ENST00000459445 131 ntBASIC-6.5□□□□□ -3.45
TOP2AP11388 RNU6-276P-201ENST00000516114 96 ntBASIC-6.5□□□□□ -3.45
TOP2AP11388 DLEU2_2.2-201ENST00000615474 90 ntBASIC-6.5□□□□□ -3.45
TOP2AP11388 RNU4-40P-201ENST00000364351 143 ntBASIC-6.5□□□□□ -3.45
TOP2AP11388 AC096644.2-201ENST00000429278 159 ntBASIC-6.5□□□□□ -3.45
TOP2AP11388 RNU5E-3P-201ENST00000515913 68 ntBASIC-6.5□□□□□ -3.45
TOP2AP11388 Y_RNA.602-201ENST00000410535 92 ntBASIC-6.51□□□□□ -3.45
TOP2AP11388 RNU6-231P-201ENST00000517122 103 ntBASIC-6.51□□□□□ -3.45
TOP2AP11388 SNORA25.1-201ENST00000362326 128 ntBASIC-6.52□□□□□ -3.45
TOP2AP11388 Y_RNA.218-201ENST00000364218 104 ntBASIC-6.52□□□□□ -3.45
TOP2AP11388 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-6.52□□□□□ -3.45
TOP2AP11388 RNY3P2-201ENST00000362918 102 ntBASIC-6.53□□□□□ -3.45
TOP2AP11388 RNU6-1108P-201ENST00000516308 104 ntBASIC-6.53□□□□□ -3.45
TOP2AP11388 SNORA8.1-201ENST00000384250 140 ntBASIC-6.55□□□□□ -3.46
TOP2AP11388 TMSB4XP3-201ENST00000445144 114 ntBASIC-6.55□□□□□ -3.46
TOP2AP11388 SNORD113.1-201ENST00000363280 73 ntBASIC-6.55□□□□□ -3.46
TOP2AP11388 Y_RNA.183-201ENST00000363882 113 ntBASIC-6.55□□□□□ -3.46
TOP2AP11388 RNU6-636P-201ENST00000384598 107 ntBASIC-6.55□□□□□ -3.46
Retrieved 100 of 98,524 protein–RNA pairs in 210.3 ms