Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MIR20A-201ENST00000362279 71 ntBASIC1.25□□□□□ -2.21
THBS1P07996 SNORA36.1-201ENST00000363424 132 ntBASIC1.25□□□□□ -2.21
THBS1P07996 Y_RNA.540-201ENST00000384638 111 ntBASIC1.25□□□□□ -2.21
THBS1P07996 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
THBS1P07996 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.25□□□□□ -2.21
THBS1P07996 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.25□□□□□ -2.21
THBS1P07996 RNA5SP404-201ENST00000517118 132 ntBASIC1.25□□□□□ -2.21
THBS1P07996 MIR548AE1-201ENST00000583292 70 ntBASIC1.25□□□□□ -2.21
THBS1P07996 MIR7107-201ENST00000611489 80 ntBASIC1.25□□□□□ -2.21
THBS1P07996 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
THBS1P07996 Y_RNA.379-201ENST00000365653 102 ntBASIC1.24□□□□□ -2.21
THBS1P07996 CYP3A54P-201ENST00000566950 75 ntBASIC1.24□□□□□ -2.21
THBS1P07996 U7.6-201ENST00000610841 64 ntBASIC1.24□□□□□ -2.21
THBS1P07996 RNA5SP325-201ENST00000363756 130 ntBASIC1.23□□□□□ -2.21
THBS1P07996 MIR582-201ENST00000365731 98 ntBASIC1.23□□□□□ -2.21
THBS1P07996 RNU6-1312P-201ENST00000362425 108 ntBASIC1.22□□□□□ -2.21
THBS1P07996 MIR4452-201ENST00000583004 71 ntBASIC1.22□□□□□ -2.21
THBS1P07996 AC243829.6-201ENST00000612652 106 ntBASIC1.22□□□□□ -2.21
THBS1P07996 MIR516B1-201ENST00000385211 90 ntBASIC1.21□□□□□ -2.22
THBS1P07996 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
THBS1P07996 AL353770.2-201ENST00000620024 78 ntBASIC1.21□□□□□ -2.22
THBS1P07996 Y_RNA.74-201ENST00000362911 99 ntBASIC1.2□□□□□ -2.22
THBS1P07996 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
THBS1P07996 MIR6779-201ENST00000617283 64 ntBASIC1.2□□□□□ -2.22
THBS1P07996 SNORD114-26-201ENST00000363543 72 ntBASIC1.19□□□□□ -2.22
THBS1P07996 Y_RNA.325-201ENST00000365171 122 ntBASIC1.19□□□□□ -2.22
THBS1P07996 RNU6-518P-201ENST00000516056 96 ntBASIC1.19□□□□□ -2.22
THBS1P07996 RNU6-231P-201ENST00000517122 103 ntBASIC1.19□□□□□ -2.22
THBS1P07996 SNORD114-29-201ENST00000364819 70 ntBASIC1.18□□□□□ -2.22
THBS1P07996 SNORD116-16-201ENST00000384533 92 ntBASIC1.18□□□□□ -2.22
THBS1P07996 RNU6-939P-201ENST00000384634 107 ntBASIC1.18□□□□□ -2.22
THBS1P07996 SNORA41B-201ENST00000384785 128 ntBASIC1.18□□□□□ -2.22
THBS1P07996 RNA5SP222-201ENST00000411039 105 ntBASIC1.18□□□□□ -2.22
THBS1P07996 MIR429-201ENST00000362106 83 ntBASIC1.17□□□□□ -2.22
THBS1P07996 SNORA9.1-201ENST00000362412 131 ntBASIC1.17□□□□□ -2.22
THBS1P07996 RNA5SP102-201ENST00000516865 106 ntBASIC1.17□□□□□ -2.22
THBS1P07996 SNORA70.25-201ENST00000612741 95 ntBASIC1.17□□□□□ -2.22
THBS1P07996 AC243829.3-201ENST00000622177 108 ntBASIC1.17□□□□□ -2.22
THBS1P07996 AL353765.1-201ENST00000605514 183 ntBASIC1.16□□□□□ -2.22
THBS1P07996 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
THBS1P07996 HMGN2P22-201ENST00000427588 175 ntBASIC1.15□□□□□ -2.23
THBS1P07996 MIR527-201ENST00000385244 85 ntBASIC1.14□□□□□ -2.23
THBS1P07996 RNU7-154P-201ENST00000516194 62 ntBASIC1.14□□□□□ -2.23
THBS1P07996 RNA5SP470-201ENST00000516463 106 ntBASIC1.14□□□□□ -2.23
THBS1P07996 MIR6515-201ENST00000619843 57 ntBASIC1.14□□□□□ -2.23
THBS1P07996 MIR1255B2-201ENST00000408618 67 ntBASIC1.13□□□□□ -2.23
THBS1P07996 MIR4661-201ENST00000582720 75 ntBASIC1.13□□□□□ -2.23
THBS1P07996 MIR7110-201ENST00000612638 86 ntBASIC1.13□□□□□ -2.23
THBS1P07996 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
THBS1P07996 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.12□□□□□ -2.23
THBS1P07996 SNORD114-22-201ENST00000365423 72 ntBASIC1.11□□□□□ -2.23
THBS1P07996 SNORA2A-201ENST00000383885 135 ntBASIC1.11□□□□□ -2.23
THBS1P07996 RNU6-848P-201ENST00000515948 107 ntBASIC1.11□□□□□ -2.23
THBS1P07996 RNU6-617P-201ENST00000516147 107 ntBASIC1.11□□□□□ -2.23
THBS1P07996 RNU6-473P-201ENST00000516164 107 ntBASIC1.11□□□□□ -2.23
THBS1P07996 RNU6-1049P-201ENST00000516414 107 ntBASIC1.11□□□□□ -2.23
THBS1P07996 MIR548AD-201ENST00000584780 82 ntBASIC1.11□□□□□ -2.23
THBS1P07996 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.11□□□□□ -2.23
THBS1P07996 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
THBS1P07996 MIR96-201ENST00000362288 78 ntBASIC1.1□□□□□ -2.23
THBS1P07996 RNU1-93P-201ENST00000364704 169 ntBASIC1.1□□□□□ -2.23
THBS1P07996 RNU6-246P-201ENST00000384702 107 ntBASIC1.1□□□□□ -2.23
THBS1P07996 MIR140-201ENST00000385282 100 ntBASIC1.1□□□□□ -2.23
THBS1P07996 SNORD116.2-201ENST00000391251 93 ntBASIC1.1□□□□□ -2.23
THBS1P07996 RNU4-88P-201ENST00000411220 86 ntBASIC1.1□□□□□ -2.23
THBS1P07996 MIR4752-201ENST00000579672 72 ntBASIC1.1□□□□□ -2.23
THBS1P07996 MIR6078-201ENST00000611069 100 ntBASIC1.1□□□□□ -2.23
THBS1P07996 RNU6-753P-201ENST00000363926 107 ntBASIC1.09□□□□□ -2.23
THBS1P07996 Y_RNA.282-201ENST00000364793 102 ntBASIC1.09□□□□□ -2.23
THBS1P07996 Y_RNA.374-201ENST00000365606 101 ntBASIC1.09□□□□□ -2.23
THBS1P07996 SNORA36.2-201ENST00000384004 127 ntBASIC1.09□□□□□ -2.23
THBS1P07996 MIR519A2-201ENST00000384990 87 ntBASIC1.09□□□□□ -2.23
THBS1P07996 RNU6-1246P-201ENST00000391064 107 ntBASIC1.09□□□□□ -2.23
THBS1P07996 SNORD71-201ENST00000411292 86 ntBASIC1.09□□□□□ -2.23
THBS1P07996 AC022709.1-201ENST00000615967 87 ntBASIC1.09□□□□□ -2.23
THBS1P07996 RNA5SP517-201ENST00000364724 117 ntBASIC1.08□□□□□ -2.24
THBS1P07996 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.08□□□□□ -2.24
THBS1P07996 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
THBS1P07996 MIR598-201ENST00000384868 97 ntBASIC1.07□□□□□ -2.24
THBS1P07996 SNORA40.8-201ENST00000411034 126 ntBASIC1.07□□□□□ -2.24
THBS1P07996 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
THBS1P07996 RNU1-29P-201ENST00000606574 126 ntBASIC1.07□□□□□ -2.24
THBS1P07996 PVT1_3.1-201ENST00000620853 95 ntBASIC1.07□□□□□ -2.24
THBS1P07996 SNORD118-201ENST00000363593 134 ntBASIC1.06□□□□□ -2.24
THBS1P07996 RNU6-229P-201ENST00000516614 102 ntBASIC1.06□□□□□ -2.24
THBS1P07996 MIR6773-201ENST00000612812 74 ntBASIC1.06□□□□□ -2.24
THBS1P07996 AC090617.8-201ENST00000623339 167 ntBASIC1.06□□□□□ -2.24
THBS1P07996 SNORD115-25-201ENST00000362619 82 ntBASIC1.05□□□□□ -2.24
THBS1P07996 MIR1285-1-201ENST00000408593 84 ntBASIC1.05□□□□□ -2.24
THBS1P07996 AC069271.1-201ENST00000445577 156 ntBASIC1.05□□□□□ -2.24
THBS1P07996 RNU6-980P-201ENST00000516925 103 ntBASIC1.05□□□□□ -2.24
THBS1P07996 MIR6767-201ENST00000637302 66 ntBASIC1.05□□□□□ -2.24
THBS1P07996 SNORA40B-201ENST00000385573 128 ntBASIC1.04□□□□□ -2.24
THBS1P07996 RNU7-188P-201ENST00000517063 64 ntBASIC1.04□□□□□ -2.24
THBS1P07996 RNU4-33P-201ENST00000364316 85 ntBASIC1.03□□□□□ -2.24
THBS1P07996 SNORA40.16-201ENST00000517238 121 ntBASIC1.03□□□□□ -2.24
THBS1P07996 RNY1P8-201ENST00000383970 114 ntBASIC1.02□□□□□ -2.25
THBS1P07996 RNU6-1223P-201ENST00000517124 104 ntBASIC1.02□□□□□ -2.25
THBS1P07996 AL590095.2-201ENST00000604136 117 ntBASIC1.02□□□□□ -2.25
THBS1P07996 SNORA25.18-201ENST00000607153 114 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 186.9 ms