Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RNY1P5-201ENST00000383890 115 ntBASIC-0.91□□□□□ -2.56
SIX3O95343 RNU7-85P-201ENST00000458851 63 ntBASIC-0.91□□□□□ -2.56
SIX3O95343 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.91□□□□□ -2.56
SIX3O95343 MIR4306-201ENST00000583390 91 ntBASIC-0.91□□□□□ -2.56
SIX3O95343 MIR548Z-201ENST00000584743 97 ntBASIC-0.91□□□□□ -2.56
SIX3O95343 MIR6854-201ENST00000614935 69 ntBASIC-0.91□□□□□ -2.56
SIX3O95343 SNORD114-25-201ENST00000363742 72 ntBASIC-0.92□□□□□ -2.56
SIX3O95343 Y_RNA.225-201ENST00000364326 97 ntBASIC-0.92□□□□□ -2.56
SIX3O95343 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.92□□□□□ -2.56
SIX3O95343 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.92□□□□□ -2.56
SIX3O95343 AP000533.3-201ENST00000447704 118 ntBASIC-0.92□□□□□ -2.56
SIX3O95343 RNU6-255P-201ENST00000516957 105 ntBASIC-0.92□□□□□ -2.56
SIX3O95343 MIR3613-201ENST00000579844 87 ntBASIC-0.92□□□□□ -2.56
SIX3O95343 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.93□□□□□ -2.56
SIX3O95343 AC022137.1-201ENST00000483735 151 ntBASIC-0.93□□□□□ -2.56
SIX3O95343 RNU6-794P-201ENST00000517261 64 ntBASIC-0.93□□□□□ -2.56
SIX3O95343 SNORA63.2-201ENST00000362603 126 ntBASIC-0.94□□□□□ -2.56
SIX3O95343 Y_RNA.232-201ENST00000364369 96 ntBASIC-0.94□□□□□ -2.56
SIX3O95343 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.94□□□□□ -2.56
SIX3O95343 SNORD18.2-201ENST00000459604 70 ntBASIC-0.94□□□□□ -2.56
SIX3O95343 RNU6-412P-201ENST00000516434 106 ntBASIC-0.94□□□□□ -2.56
SIX3O95343 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.94□□□□□ -2.56
SIX3O95343 RNU6-226P-201ENST00000363778 107 ntBASIC-0.95□□□□□ -2.56
SIX3O95343 RNU6-990P-201ENST00000364385 104 ntBASIC-0.95□□□□□ -2.56
SIX3O95343 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.95□□□□□ -2.56
SIX3O95343 AC104996.3-201ENST00000590718 94 ntBASIC-0.95□□□□□ -2.56
SIX3O95343 MIR6773-201ENST00000612812 74 ntBASIC-0.95□□□□□ -2.56
SIX3O95343 U6.96-201ENST00000636425 70 ntBASIC-0.95□□□□□ -2.56
SIX3O95343 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.96□□□□□ -2.56
SIX3O95343 MIR3064-201ENST00000581130 66 ntBASIC-0.96□□□□□ -2.56
SIX3O95343 MIR124-2-201ENST00000385081 109 ntBASIC-0.97□□□□□ -2.56
SIX3O95343 HLA-S-202ENST00000425174 53 ntBASIC-0.97□□□□□ -2.56
SIX3O95343 RNU6-795P-201ENST00000516323 103 ntBASIC-0.97□□□□□ -2.56
SIX3O95343 SNORA63.6-201ENST00000364921 119 ntBASIC-0.98□□□□□ -2.57
SIX3O95343 RNU6-905P-201ENST00000384434 107 ntBASIC-0.98□□□□□ -2.57
SIX3O95343 AL500527.2-201ENST00000454105 95 ntBASIC-0.98□□□□□ -2.57
SIX3O95343 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.98□□□□□ -2.57
SIX3O95343 MTATP6P29-201ENST00000415057 132 ntBASIC-0.99□□□□□ -2.57
SIX3O95343 SNORA13-201ENST00000458790 133 ntBASIC-0.99□□□□□ -2.57
SIX3O95343 SNORD4B-201ENST00000459083 72 ntBASIC-0.99□□□□□ -2.57
SIX3O95343 RNA5SP147-201ENST00000516493 109 ntBASIC-0.99□□□□□ -2.57
SIX3O95343 MIR4499-201ENST00000584834 69 ntBASIC-0.99□□□□□ -2.57
SIX3O95343 Y_RNA.71-201ENST00000362892 104 ntBASIC-1□□□□□ -2.57
SIX3O95343 RNU6-495P-201ENST00000362995 107 ntBASIC-1□□□□□ -2.57
SIX3O95343 Y_RNA.96-201ENST00000363092 109 ntBASIC-1□□□□□ -2.57
SIX3O95343 RNU6-1051P-201ENST00000365471 102 ntBASIC-1□□□□□ -2.57
SIX3O95343 RNU6-1014P-201ENST00000383940 103 ntBASIC-1□□□□□ -2.57
SIX3O95343 MIR203A-201ENST00000384836 110 ntBASIC-1□□□□□ -2.57
SIX3O95343 RNU6-1177P-201ENST00000391058 104 ntBASIC-1□□□□□ -2.57
SIX3O95343 RNU6-659P-201ENST00000516454 104 ntBASIC-1□□□□□ -2.57
SIX3O95343 uc_338.19-201ENST00000616808 99 ntBASIC-1□□□□□ -2.57
SIX3O95343 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.01□□□□□ -2.57
SIX3O95343 SNORD116-21-201ENST00000384507 92 ntBASIC-1.01□□□□□ -2.57
SIX3O95343 RNA5SP292-201ENST00000390974 118 ntBASIC-1.01□□□□□ -2.57
SIX3O95343 RNU6-337P-201ENST00000391243 106 ntBASIC-1.01□□□□□ -2.57
SIX3O95343 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.01□□□□□ -2.57
SIX3O95343 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.01□□□□□ -2.57
SIX3O95343 MIR4773-1-201ENST00000637203 78 ntBASIC-1.01□□□□□ -2.57
SIX3O95343 RNU6-208P-201ENST00000362431 107 ntBASIC-1.02□□□□□ -2.57
SIX3O95343 SNORD90-201ENST00000391145 111 ntBASIC-1.02□□□□□ -2.57
SIX3O95343 SNORA18.5-201ENST00000516616 101 ntBASIC-1.02□□□□□ -2.57
SIX3O95343 MIR4777-201ENST00000583710 86 ntBASIC-1.02□□□□□ -2.57
SIX3O95343 AC012531.4-201ENST00000616509 177 ntBASIC-1.02□□□□□ -2.57
SIX3O95343 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.03□□□□□ -2.57
SIX3O95343 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.03□□□□□ -2.57
SIX3O95343 RNU6-972P-201ENST00000391208 107 ntBASIC-1.03□□□□□ -2.57
SIX3O95343 SCARNA23-201ENST00000516060 130 ntBASIC-1.03□□□□□ -2.57
SIX3O95343 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.03□□□□□ -2.57
SIX3O95343 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.04□□□□□ -2.58
SIX3O95343 MIRLET7B-201ENST00000385140 83 ntBASIC-1.04□□□□□ -2.58
SIX3O95343 RNU6-983P-201ENST00000516004 103 ntBASIC-1.04□□□□□ -2.58
SIX3O95343 RNU6-62P-201ENST00000516526 102 ntBASIC-1.04□□□□□ -2.58
SIX3O95343 RNU5F-1-201ENST00000362507 117 ntBASIC-1.05□□□□□ -2.58
SIX3O95343 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.05□□□□□ -2.58
SIX3O95343 SNORD74.6-201ENST00000364796 70 ntBASIC-1.05□□□□□ -2.58
SIX3O95343 SNORD116-14-201ENST00000383894 92 ntBASIC-1.05□□□□□ -2.58
SIX3O95343 SNORD116-17-201ENST00000383929 92 ntBASIC-1.05□□□□□ -2.58
SIX3O95343 SNORD116-15-201ENST00000384445 92 ntBASIC-1.05□□□□□ -2.58
SIX3O95343 SNORD116-19-201ENST00000384729 92 ntBASIC-1.05□□□□□ -2.58
SIX3O95343 RNU6-209P-201ENST00000384118 107 ntBASIC-1.06□□□□□ -2.58
SIX3O95343 RNU6-540P-201ENST00000384622 101 ntBASIC-1.06□□□□□ -2.58
SIX3O95343 AC006254.2-201ENST00000603259 279 ntBASIC-1.06□□□□□ -2.58
SIX3O95343 RNU6-382P-201ENST00000365181 106 ntBASIC-1.07□□□□□ -2.58
SIX3O95343 RNU6-260P-201ENST00000384092 107 ntBASIC-1.07□□□□□ -2.58
SIX3O95343 MIR548I1-201ENST00000408810 149 ntBASIC-1.07□□□□□ -2.58
SIX3O95343 RNU6-887P-201ENST00000410660 100 ntBASIC-1.07□□□□□ -2.58
SIX3O95343 RNU6-118P-201ENST00000516552 102 ntBASIC-1.07□□□□□ -2.58
SIX3O95343 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.07□□□□□ -2.58
SIX3O95343 AC090617.8-201ENST00000623339 167 ntBASIC-1.07□□□□□ -2.58
SIX3O95343 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.08□□□□□ -2.58
SIX3O95343 SNORD114-17-201ENST00000364699 75 ntBASIC-1.08□□□□□ -2.58
SIX3O95343 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.08□□□□□ -2.58
SIX3O95343 MIR1302-5-201ENST00000408164 150 ntBASIC-1.08□□□□□ -2.58
SIX3O95343 SNORD75.2-201ENST00000408784 58 ntBASIC-1.08□□□□□ -2.58
SIX3O95343 RNU6-592P-201ENST00000411333 103 ntBASIC-1.08□□□□□ -2.58
SIX3O95343 RNU6-1333P-201ENST00000516162 93 ntBASIC-1.08□□□□□ -2.58
SIX3O95343 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.09□□□□□ -2.58
SIX3O95343 MIR6509-201ENST00000614603 85 ntBASIC-1.09□□□□□ -2.58
SIX3O95343 RNU6-431P-201ENST00000383874 107 ntBASIC-1.1□□□□□ -2.59
SIX3O95343 SNORD58A-201ENST00000383875 65 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 209.8 ms