Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.57□□□□□ -2.16
H3BM21 SNORD89-201ENST00000390981 114 ntBASIC1.57□□□□□ -2.16
H3BM21 AC098934.3-201ENST00000430450 190 ntBASIC1.57□□□□□ -2.16
H3BM21 SNORA70.22-201ENST00000517160 124 ntBASIC1.57□□□□□ -2.16
H3BM21 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.57□□□□□ -2.16
H3BM21 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.57□□□□□ -2.16
H3BM21 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
H3BM21 RNU6-822P-201ENST00000362707 106 ntBASIC1.56□□□□□ -2.16
H3BM21 SNORD12-201ENST00000391002 90 ntBASIC1.55□□□□□ -2.16
H3BM21 MIR1276-201ENST00000408707 83 ntBASIC1.55□□□□□ -2.16
H3BM21 RNA5SP227-201ENST00000516184 113 ntBASIC1.55□□□□□ -2.16
H3BM21 RNU6-1110P-201ENST00000516462 101 ntBASIC1.55□□□□□ -2.16
H3BM21 SNORA31.24-201ENST00000517232 57 ntBASIC1.55□□□□□ -2.16
H3BM21 U2.18-201ENST00000622185 84 ntBASIC1.55□□□□□ -2.16
H3BM21 MIR6828-201ENST00000636181 60 ntBASIC1.55□□□□□ -2.16
H3BM21 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.55□□□□□ -2.16
H3BM21 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
H3BM21 AL451105.1-201ENST00000450005 189 ntBASIC1.54□□□□□ -2.16
H3BM21 MIR3612-201ENST00000579753 87 ntBASIC1.54□□□□□ -2.16
H3BM21 AC025627.3-201ENST00000582078 182 ntBASIC1.54□□□□□ -2.16
H3BM21 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.54□□□□□ -2.16
H3BM21 RNU6-598P-201ENST00000364017 105 ntBASIC1.53□□□□□ -2.16
H3BM21 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
H3BM21 RNU6-337P-201ENST00000391243 106 ntBASIC1.53□□□□□ -2.16
H3BM21 RNU6-721P-201ENST00000410155 105 ntBASIC1.53□□□□□ -2.16
H3BM21 AC002429.1-201ENST00000437672 148 ntBASIC1.53□□□□□ -2.16
H3BM21 RNU6-828P-201ENST00000364876 107 ntBASIC1.52□□□□□ -2.17
H3BM21 RNU6-392P-201ENST00000364926 101 ntBASIC1.52□□□□□ -2.17
H3BM21 MIR573-201ENST00000384964 99 ntBASIC1.52□□□□□ -2.17
H3BM21 AC244090.1-201ENST00000441884 93 ntBASIC1.52□□□□□ -2.17
H3BM21 MIR6504-201ENST00000613520 61 ntBASIC1.52□□□□□ -2.17
H3BM21 RNU6-742P-201ENST00000365289 107 ntBASIC1.51□□□□□ -2.17
H3BM21 MIR222-201ENST00000384992 110 ntBASIC1.51□□□□□ -2.17
H3BM21 MIR20A-201ENST00000362279 71 ntBASIC1.5□□□□□ -2.17
H3BM21 RNU6-955P-201ENST00000410497 104 ntBASIC1.5□□□□□ -2.17
H3BM21 RNA5SP470-201ENST00000516463 106 ntBASIC1.5□□□□□ -2.17
H3BM21 MIR6773-201ENST00000612812 74 ntBASIC1.5□□□□□ -2.17
H3BM21 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
H3BM21 SNORA70.25-201ENST00000612741 95 ntBASIC1.49□□□□□ -2.17
H3BM21 RNU6-945P-201ENST00000383947 107 ntBASIC1.48□□□□□ -2.17
H3BM21 RNU6-995P-201ENST00000391244 107 ntBASIC1.48□□□□□ -2.17
H3BM21 MIR1323-201ENST00000408090 73 ntBASIC1.48□□□□□ -2.17
H3BM21 MIR1304-201ENST00000408243 91 ntBASIC1.48□□□□□ -2.17
H3BM21 AC138207.3-201ENST00000585289 166 ntBASIC1.48□□□□□ -2.17
H3BM21 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
H3BM21 SNORA36.1-201ENST00000363424 132 ntBASIC1.47□□□□□ -2.17
H3BM21 RNU6-1008P-201ENST00000384160 104 ntBASIC1.47□□□□□ -2.17
H3BM21 MIR125B1-201ENST00000385236 88 ntBASIC1.47□□□□□ -2.17
H3BM21 SNORD2-201ENST00000459163 69 ntBASIC1.47□□□□□ -2.17
H3BM21 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.47□□□□□ -2.17
H3BM21 RNA5SP268-201ENST00000516828 124 ntBASIC1.47□□□□□ -2.17
H3BM21 RNU6-894P-201ENST00000517094 105 ntBASIC1.47□□□□□ -2.17
H3BM21 Y_RNA.540-201ENST00000384638 111 ntBASIC1.46□□□□□ -2.18
H3BM21 AL354695.1-201ENST00000427935 228 ntBASIC1.46□□□□□ -2.18
H3BM21 FABP5P4-201ENST00000437203 171 ntBASIC1.46□□□□□ -2.18
H3BM21 RNA5SP94-201ENST00000516917 108 ntBASIC1.46□□□□□ -2.18
H3BM21 MIR4421-201ENST00000578133 69 ntBASIC1.46□□□□□ -2.18
H3BM21 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC1.46□□□□□ -2.18
H3BM21 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
H3BM21 RNY1P8-201ENST00000383970 114 ntBASIC1.45□□□□□ -2.18
H3BM21 HMGN2P22-201ENST00000427588 175 ntBASIC1.45□□□□□ -2.18
H3BM21 MIR548AA1-201ENST00000384971 97 ntBASIC1.44□□□□□ -2.18
H3BM21 MIRLET7B-201ENST00000385140 83 ntBASIC1.44□□□□□ -2.18
H3BM21 MIR7107-201ENST00000611489 80 ntBASIC1.44□□□□□ -2.18
H3BM21 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
H3BM21 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
H3BM21 Y_RNA.139-201ENST00000363464 102 ntBASIC1.43□□□□□ -2.18
H3BM21 SNORA49-201ENST00000386157 136 ntBASIC1.43□□□□□ -2.18
H3BM21 MIR4752-201ENST00000579672 72 ntBASIC1.43□□□□□ -2.18
H3BM21 MIR4452-201ENST00000583004 71 ntBASIC1.43□□□□□ -2.18
H3BM21 RNU6-42P-201ENST00000384165 107 ntBASIC1.42□□□□□ -2.18
H3BM21 RNU6-59P-201ENST00000384787 107 ntBASIC1.42□□□□□ -2.18
H3BM21 MIR320A-201ENST00000385302 82 ntBASIC1.42□□□□□ -2.18
H3BM21 RNU6-1262P-201ENST00000516217 96 ntBASIC1.42□□□□□ -2.18
H3BM21 SNORD45.2-201ENST00000363552 72 ntBASIC1.41□□□□□ -2.18
H3BM21 RNU6-1267P-201ENST00000410747 107 ntBASIC1.41□□□□□ -2.18
H3BM21 RNA5SP102-201ENST00000516865 106 ntBASIC1.41□□□□□ -2.18
H3BM21 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC1.41□□□□□ -2.18
H3BM21 SNORD114-29-201ENST00000364819 70 ntBASIC1.4□□□□□ -2.19
H3BM21 SNORA25-201ENST00000384384 134 ntBASIC1.4□□□□□ -2.19
H3BM21 MIR29B1-201ENST00000385015 81 ntBASIC1.4□□□□□ -2.19
H3BM21 RPS29P23-201ENST00000458635 123 ntBASIC1.4□□□□□ -2.19
H3BM21 AL353770.2-201ENST00000620024 78 ntBASIC1.4□□□□□ -2.19
H3BM21 RNU6-782P-201ENST00000516852 104 ntBASIC1.39□□□□□ -2.19
H3BM21 MIR6078-201ENST00000611069 100 ntBASIC1.39□□□□□ -2.19
H3BM21 MIR18A-201ENST00000362310 71 ntBASIC1.38□□□□□ -2.19
H3BM21 RNA5SP327-201ENST00000362494 101 ntBASIC1.38□□□□□ -2.19
H3BM21 MIR548H4-201ENST00000408689 111 ntBASIC1.38□□□□□ -2.19
H3BM21 RNA5SP220-201ENST00000516298 104 ntBASIC1.38□□□□□ -2.19
H3BM21 RNA5SP480-201ENST00000516840 109 ntBASIC1.38□□□□□ -2.19
H3BM21 AL353803.5-201ENST00000599815 141 ntBASIC1.38□□□□□ -2.19
H3BM21 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
H3BM21 RNU6-974P-201ENST00000384099 108 ntBASIC1.37□□□□□ -2.19
H3BM21 MIR6734-201ENST00000621166 68 ntBASIC1.37□□□□□ -2.19
H3BM21 RNU6-502P-201ENST00000362419 108 ntBASIC1.36□□□□□ -2.19
H3BM21 SNORD114-22-201ENST00000365423 72 ntBASIC1.36□□□□□ -2.19
H3BM21 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
H3BM21 RNA5SP61-201ENST00000516453 100 ntBASIC1.36□□□□□ -2.19
H3BM21 RNU7-188P-201ENST00000517063 64 ntBASIC1.36□□□□□ -2.19
H3BM21 SNORD26-201ENST00000384147 75 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms