Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 Y_RNA.205-201ENST00000364128 113 ntBASIC1.13□□□□□ -2.23
PCDHGA11Q9Y5H2 RNU6-990P-201ENST00000364385 104 ntBASIC1.13□□□□□ -2.23
PCDHGA11Q9Y5H2 MIR1285-1-201ENST00000408593 84 ntBASIC1.13□□□□□ -2.23
PCDHGA11Q9Y5H2 RNA5SP147-201ENST00000516493 109 ntBASIC1.13□□□□□ -2.23
PCDHGA11Q9Y5H2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
PCDHGA11Q9Y5H2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.12□□□□□ -2.23
PCDHGA11Q9Y5H2 RNU6-645P-201ENST00000364649 106 ntBASIC1.12□□□□□ -2.23
PCDHGA11Q9Y5H2 MIR1265-201ENST00000408444 86 ntBASIC1.12□□□□□ -2.23
PCDHGA11Q9Y5H2 RNU6-1162P-201ENST00000384443 104 ntBASIC1.11□□□□□ -2.23
PCDHGA11Q9Y5H2 OR2A41P-201ENST00000473586 105 ntBASIC1.11□□□□□ -2.23
PCDHGA11Q9Y5H2 SCARNA17.3-201ENST00000516381 125 ntBASIC1.11□□□□□ -2.23
PCDHGA11Q9Y5H2 Y_RNA.676-201ENST00000516393 96 ntBASIC1.11□□□□□ -2.23
PCDHGA11Q9Y5H2 MIR5706-201ENST00000579841 80 ntBASIC1.11□□□□□ -2.23
PCDHGA11Q9Y5H2 uc_338.10-201ENST00000621872 182 ntBASIC1.11□□□□□ -2.23
PCDHGA11Q9Y5H2 RNA5SP517-201ENST00000364724 117 ntBASIC1.1□□□□□ -2.23
PCDHGA11Q9Y5H2 RNU6-110P-201ENST00000384508 104 ntBASIC1.1□□□□□ -2.23
PCDHGA11Q9Y5H2 MIR4473-201ENST00000583731 91 ntBASIC1.1□□□□□ -2.23
PCDHGA11Q9Y5H2 MIR6739-201ENST00000622461 75 ntBASIC1.1□□□□□ -2.23
PCDHGA11Q9Y5H2 AC103706.3-201ENST00000636297 85 ntBASIC1.1□□□□□ -2.23
PCDHGA11Q9Y5H2 MIR652-201ENST00000385278 98 ntBASIC1.09□□□□□ -2.23
PCDHGA11Q9Y5H2 RNU6-1053P-201ENST00000515930 101 ntBASIC1.09□□□□□ -2.23
PCDHGA11Q9Y5H2 Y_RNA.164-201ENST00000363709 102 ntBASIC1.08□□□□□ -2.24
PCDHGA11Q9Y5H2 SNORD71-201ENST00000411292 86 ntBASIC1.08□□□□□ -2.24
PCDHGA11Q9Y5H2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.08□□□□□ -2.24
PCDHGA11Q9Y5H2 ACA64.5-201ENST00000516207 127 ntBASIC1.08□□□□□ -2.24
PCDHGA11Q9Y5H2 snoU13.31-201ENST00000607291 104 ntBASIC1.08□□□□□ -2.24
PCDHGA11Q9Y5H2 U7.6-201ENST00000610841 64 ntBASIC1.08□□□□□ -2.24
PCDHGA11Q9Y5H2 MIR6078-201ENST00000611069 100 ntBASIC1.08□□□□□ -2.24
PCDHGA11Q9Y5H2 SNORA40.8-201ENST00000411034 126 ntBASIC1.07□□□□□ -2.24
PCDHGA11Q9Y5H2 AL603825.1-201ENST00000438481 80 ntBASIC1.07□□□□□ -2.24
PCDHGA11Q9Y5H2 RNY1P8-201ENST00000383970 114 ntBASIC1.06□□□□□ -2.24
PCDHGA11Q9Y5H2 SNORA15B-2-201ENST00000384058 135 ntBASIC1.06□□□□□ -2.24
PCDHGA11Q9Y5H2 SNORA15B-1-201ENST00000384334 135 ntBASIC1.06□□□□□ -2.24
PCDHGA11Q9Y5H2 MIR4511-201ENST00000582784 87 ntBASIC1.06□□□□□ -2.24
PCDHGA11Q9Y5H2 AC211469.2-201ENST00000605461 205 ntBASIC1.06□□□□□ -2.24
PCDHGA11Q9Y5H2 SNORA70.25-201ENST00000612741 95 ntBASIC1.06□□□□□ -2.24
PCDHGA11Q9Y5H2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
PCDHGA11Q9Y5H2 AC069271.1-201ENST00000445577 156 ntBASIC1.05□□□□□ -2.24
PCDHGA11Q9Y5H2 MIR4752-201ENST00000579672 72 ntBASIC1.05□□□□□ -2.24
PCDHGA11Q9Y5H2 SNORD118-201ENST00000363593 134 ntBASIC1.04□□□□□ -2.24
PCDHGA11Q9Y5H2 MIR521-2-201ENST00000384818 87 ntBASIC1.04□□□□□ -2.24
PCDHGA11Q9Y5H2 AC021146.9-201ENST00000512503 156 ntBASIC1.04□□□□□ -2.24
PCDHGA11Q9Y5H2 SNORA40.17-201ENST00000517256 115 ntBASIC1.04□□□□□ -2.24
PCDHGA11Q9Y5H2 SNORA25.18-201ENST00000607153 114 ntBASIC1.04□□□□□ -2.24
PCDHGA11Q9Y5H2 SNORA2A-201ENST00000383885 135 ntBASIC1.03□□□□□ -2.24
PCDHGA11Q9Y5H2 RNU6-542P-201ENST00000516405 103 ntBASIC1.03□□□□□ -2.24
PCDHGA11Q9Y5H2 RNU6-656P-201ENST00000516785 107 ntBASIC1.03□□□□□ -2.24
PCDHGA11Q9Y5H2 MIR4498-201ENST00000577599 66 ntBASIC1.03□□□□□ -2.24
PCDHGA11Q9Y5H2 MIR548AE1-201ENST00000583292 70 ntBASIC1.03□□□□□ -2.24
PCDHGA11Q9Y5H2 MIR4295-201ENST00000585286 85 ntBASIC1.03□□□□□ -2.24
PCDHGA11Q9Y5H2 AL590095.2-201ENST00000604136 117 ntBASIC1.03□□□□□ -2.24
PCDHGA11Q9Y5H2 RNA5SP215-201ENST00000363440 122 ntBASIC1.02□□□□□ -2.25
PCDHGA11Q9Y5H2 RNU6-1187P-201ENST00000364771 110 ntBASIC1.02□□□□□ -2.25
PCDHGA11Q9Y5H2 SNORA63.6-201ENST00000364921 119 ntBASIC1.02□□□□□ -2.25
PCDHGA11Q9Y5H2 AC087343.1-201ENST00000477341 475 ntBASIC1.02□□□□□ -2.25
PCDHGA11Q9Y5H2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.01□□□□□ -2.25
PCDHGA11Q9Y5H2 AC103810.9-201ENST00000606688 112 ntBASIC1.01□□□□□ -2.25
PCDHGA11Q9Y5H2 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.01□□□□□ -2.25
PCDHGA11Q9Y5H2 Y_RNA.375-201ENST00000365625 101 ntBASIC1□□□□□ -2.25
PCDHGA11Q9Y5H2 RNA5SP247-201ENST00000411181 105 ntBASIC1□□□□□ -2.25
PCDHGA11Q9Y5H2 snoU13.13-201ENST00000458842 104 ntBASIC1□□□□□ -2.25
PCDHGA11Q9Y5H2 TRMT112P2-201ENST00000512910 132 ntBASIC1□□□□□ -2.25
PCDHGA11Q9Y5H2 RNU6-229P-201ENST00000516614 102 ntBASIC1□□□□□ -2.25
PCDHGA11Q9Y5H2 SNORD114-21-201ENST00000606412 72 ntBASIC1□□□□□ -2.25
PCDHGA11Q9Y5H2 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
PCDHGA11Q9Y5H2 Y_RNA.125-201ENST00000363371 111 ntBASIC0.99□□□□□ -2.25
PCDHGA11Q9Y5H2 MIR518A1-201ENST00000385068 85 ntBASIC0.99□□□□□ -2.25
PCDHGA11Q9Y5H2 PSMC1P5-201ENST00000512850 177 ntBASIC0.99□□□□□ -2.25
PCDHGA11Q9Y5H2 RNU6-848P-201ENST00000515948 107 ntBASIC0.99□□□□□ -2.25
PCDHGA11Q9Y5H2 RNU6-617P-201ENST00000516147 107 ntBASIC0.99□□□□□ -2.25
PCDHGA11Q9Y5H2 RNU6-473P-201ENST00000516164 107 ntBASIC0.99□□□□□ -2.25
PCDHGA11Q9Y5H2 RNU6-1049P-201ENST00000516414 107 ntBASIC0.99□□□□□ -2.25
PCDHGA11Q9Y5H2 RNU6-1089P-201ENST00000516473 104 ntBASIC0.99□□□□□ -2.25
PCDHGA11Q9Y5H2 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
PCDHGA11Q9Y5H2 MIR20A-201ENST00000362279 71 ntBASIC0.98□□□□□ -2.25
PCDHGA11Q9Y5H2 RNU6-392P-201ENST00000364926 101 ntBASIC0.98□□□□□ -2.25
PCDHGA11Q9Y5H2 HMGN2P22-201ENST00000427588 175 ntBASIC0.98□□□□□ -2.25
PCDHGA11Q9Y5H2 Y_RNA.633-201ENST00000459107 95 ntBASIC0.97□□□□□ -2.25
PCDHGA11Q9Y5H2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.97□□□□□ -2.25
PCDHGA11Q9Y5H2 AL109933.3-201ENST00000619095 188 ntBASIC0.97□□□□□ -2.25
PCDHGA11Q9Y5H2 RNU4-38P-201ENST00000364472 129 ntBASIC0.96□□□□□ -2.26
PCDHGA11Q9Y5H2 RNU6-302P-201ENST00000365249 107 ntBASIC0.96□□□□□ -2.26
PCDHGA11Q9Y5H2 Y_RNA.423-201ENST00000384057 113 ntBASIC0.96□□□□□ -2.26
PCDHGA11Q9Y5H2 AC244090.1-201ENST00000441884 93 ntBASIC0.96□□□□□ -2.26
PCDHGA11Q9Y5H2 SNORD2-201ENST00000459163 69 ntBASIC0.96□□□□□ -2.26
PCDHGA11Q9Y5H2 RPL39P28-201ENST00000465655 155 ntBASIC0.96□□□□□ -2.26
PCDHGA11Q9Y5H2 RNU1-29P-201ENST00000606574 126 ntBASIC0.96□□□□□ -2.26
PCDHGA11Q9Y5H2 MIR548C-201ENST00000384815 97 ntBASIC0.95□□□□□ -2.26
PCDHGA11Q9Y5H2 RNU6-321P-201ENST00000410912 106 ntBASIC0.95□□□□□ -2.26
PCDHGA11Q9Y5H2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.95□□□□□ -2.26
PCDHGA11Q9Y5H2 SNORD114-29-201ENST00000364819 70 ntBASIC0.94□□□□□ -2.26
PCDHGA11Q9Y5H2 MIR548E-201ENST00000408287 88 ntBASIC0.94□□□□□ -2.26
PCDHGA11Q9Y5H2 AL157398.1-201ENST00000452981 186 ntBASIC0.93□□□□□ -2.26
PCDHGA11Q9Y5H2 MIR582-201ENST00000365731 98 ntBASIC0.92□□□□□ -2.26
PCDHGA11Q9Y5H2 MIR1287-201ENST00000408492 90 ntBASIC0.92□□□□□ -2.26
PCDHGA11Q9Y5H2 AC098934.3-201ENST00000430450 190 ntBASIC0.92□□□□□ -2.26
PCDHGA11Q9Y5H2 RNU6-863P-201ENST00000515989 104 ntBASIC0.92□□□□□ -2.26
PCDHGA11Q9Y5H2 MIR9-2-201ENST00000384838 87 ntBASIC0.91□□□□□ -2.26
PCDHGA11Q9Y5H2 MIR516B1-201ENST00000385211 90 ntBASIC0.91□□□□□ -2.26
PCDHGA11Q9Y5H2 RNA5SP299-201ENST00000391203 116 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 219.8 ms