Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 RNU6-1187P-201ENST00000364771 110 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 MIR889-201ENST00000401280 79 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 AC073261.1-201ENST00000429409 121 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 RNU6-752P-201ENST00000516376 102 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 MIR4711-201ENST00000578274 70 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 MIR3134-201ENST00000579433 74 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 MIR6835-201ENST00000621552 64 ntBASIC0.94□□□□□ -2.26
PTPN22Q9Y2R2 RNU6-154P-201ENST00000384306 106 ntBASIC0.93□□□□□ -2.26
PTPN22Q9Y2R2 RNU6-110P-201ENST00000384508 104 ntBASIC0.93□□□□□ -2.26
PTPN22Q9Y2R2 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
PTPN22Q9Y2R2 Y_RNA.371-201ENST00000365591 113 ntBASIC0.92□□□□□ -2.26
PTPN22Q9Y2R2 SNORA8.2-201ENST00000384372 139 ntBASIC0.92□□□□□ -2.26
PTPN22Q9Y2R2 SNORD75.2-201ENST00000408784 58 ntBASIC0.92□□□□□ -2.26
PTPN22Q9Y2R2 RPL39P28-201ENST00000465655 155 ntBASIC0.92□□□□□ -2.26
PTPN22Q9Y2R2 MIR4484-201ENST00000582855 83 ntBASIC0.92□□□□□ -2.26
PTPN22Q9Y2R2 AL162376.1-201ENST00000624117 175 ntBASIC0.92□□□□□ -2.26
PTPN22Q9Y2R2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 RNU6-495P-201ENST00000362995 107 ntBASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 Y_RNA.565-201ENST00000384719 101 ntBASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 MIR508-201ENST00000384857 115 ntBASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 MIR548L-201ENST00000408303 86 ntBASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 MIR1197-201ENST00000408818 88 ntBASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 HAR1A.1-201ENST00000459583 118 ntBASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.91□□□□□ -2.26
PTPN22Q9Y2R2 MT-TY-201ENST00000387409 66 ntBASIC0.9□□□□□ -2.27
PTPN22Q9Y2R2 RNA5SP222-201ENST00000411039 105 ntBASIC0.9□□□□□ -2.27
PTPN22Q9Y2R2 SNORA36.1-201ENST00000363424 132 ntBASIC0.89□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-274P-201ENST00000459566 107 ntBASIC0.89□□□□□ -2.27
PTPN22Q9Y2R2 RNA5SP94-201ENST00000516917 108 ntBASIC0.89□□□□□ -2.27
PTPN22Q9Y2R2 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 RNU1-141P-201ENST00000364623 158 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-382P-201ENST00000365181 106 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 SNORA8.1-201ENST00000384250 140 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-269P-201ENST00000391077 97 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-70P-201ENST00000516438 60 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-687P-201ENST00000516443 89 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 MIR3675-201ENST00000583661 73 ntBASIC0.88□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-587P-201ENST00000391282 106 ntBASIC0.87□□□□□ -2.27
PTPN22Q9Y2R2 RNA5SP227-201ENST00000516184 113 ntBASIC0.87□□□□□ -2.27
PTPN22Q9Y2R2 RNA5SP268-201ENST00000516828 124 ntBASIC0.87□□□□□ -2.27
PTPN22Q9Y2R2 RNA5SP347-201ENST00000362445 119 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-330P-201ENST00000363015 107 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 SNORA36.2-201ENST00000384004 127 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-871P-201ENST00000516122 100 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-1015P-201ENST00000517121 99 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 MIR4460-201ENST00000577862 86 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 MIR4653-201ENST00000585107 83 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 MIR4773-1-201ENST00000637203 78 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 AC073869.9-201ENST00000641610 120 ntBASIC0.86□□□□□ -2.27
PTPN22Q9Y2R2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-634P-201ENST00000459134 106 ntBASIC0.85□□□□□ -2.27
PTPN22Q9Y2R2 AC069503.3-201ENST00000618674 145 ntBASIC0.85□□□□□ -2.27
PTPN22Q9Y2R2 RNU6V-201ENST00000384105 107 ntBASIC0.84□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-351P-201ENST00000516097 100 ntBASIC0.84□□□□□ -2.27
PTPN22Q9Y2R2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.84□□□□□ -2.27
PTPN22Q9Y2R2 RNU6-54P-201ENST00000365563 107 ntBASIC0.83□□□□□ -2.28
PTPN22Q9Y2R2 RNU6-35P-201ENST00000384530 107 ntBASIC0.83□□□□□ -2.28
PTPN22Q9Y2R2 RNU6-1241P-201ENST00000384536 107 ntBASIC0.83□□□□□ -2.28
PTPN22Q9Y2R2 MIR7107-201ENST00000611489 80 ntBASIC0.83□□□□□ -2.28
PTPN22Q9Y2R2 MIR2909-201ENST00000617113 69 ntBASIC0.83□□□□□ -2.28
PTPN22Q9Y2R2 MIR664A-201ENST00000626086 82 ntBASIC0.83□□□□□ -2.28
PTPN22Q9Y2R2 MIR6866-201ENST00000638146 69 ntBASIC0.83□□□□□ -2.28
PTPN22Q9Y2R2 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
PTPN22Q9Y2R2 MIR140-201ENST00000385282 100 ntBASIC0.82□□□□□ -2.28
PTPN22Q9Y2R2 RNA5SP484-201ENST00000458857 111 ntBASIC0.82□□□□□ -2.28
PTPN22Q9Y2R2 AC243829.3-201ENST00000622177 108 ntBASIC0.82□□□□□ -2.28
PTPN22Q9Y2R2 RNU6-1039P-201ENST00000383931 107 ntBASIC0.81□□□□□ -2.28
PTPN22Q9Y2R2 RNY1P8-201ENST00000383970 114 ntBASIC0.81□□□□□ -2.28
PTPN22Q9Y2R2 AC139453.2-201ENST00000487255 133 ntBASIC0.81□□□□□ -2.28
PTPN22Q9Y2R2 MIR8053-201ENST00000613344 75 ntBASIC0.81□□□□□ -2.28
PTPN22Q9Y2R2 AL691482.2-201ENST00000457453 84 ntBASIC0.8□□□□□ -2.28
PTPN22Q9Y2R2 SNORD42B-201ENST00000458893 67 ntBASIC0.8□□□□□ -2.28
PTPN22Q9Y2R2 AC114801.3-201ENST00000510231 177 ntBASIC0.8□□□□□ -2.28
PTPN22Q9Y2R2 NAMPTP3-201ENST00000569273 224 ntBASIC0.8□□□□□ -2.28
PTPN22Q9Y2R2 SNORD114-4-201ENST00000363962 75 ntBASIC0.79□□□□□ -2.28
PTPN22Q9Y2R2 MIR154-201ENST00000385243 84 ntBASIC0.79□□□□□ -2.28
PTPN22Q9Y2R2 RNA5SP517-201ENST00000364724 117 ntBASIC0.78□□□□□ -2.28
PTPN22Q9Y2R2 AC098934.3-201ENST00000430450 190 ntBASIC0.78□□□□□ -2.28
PTPN22Q9Y2R2 RNU6-539P-201ENST00000516665 103 ntBASIC0.78□□□□□ -2.28
PTPN22Q9Y2R2 MIR5706-201ENST00000579841 80 ntBASIC0.78□□□□□ -2.28
PTPN22Q9Y2R2 MIR6509-201ENST00000614603 85 ntBASIC0.77□□□□□ -2.29
PTPN22Q9Y2R2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
PTPN22Q9Y2R2 SNORD118-201ENST00000363593 134 ntBASIC0.76□□□□□ -2.29
PTPN22Q9Y2R2 AC092634.7-201ENST00000621022 103 ntBASIC0.76□□□□□ -2.29
PTPN22Q9Y2R2 SNORD45.1-201ENST00000363181 77 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 SNORD115-22-201ENST00000364456 82 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 SNORA40.8-201ENST00000411034 126 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 AC006210.1-201ENST00000424882 111 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 RNU6-848P-201ENST00000515948 107 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 RNU6-617P-201ENST00000516147 107 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 RNU6-473P-201ENST00000516164 107 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 RNU6-1049P-201ENST00000516414 107 ntBASIC0.75□□□□□ -2.29
PTPN22Q9Y2R2 RNA5SP499-201ENST00000363982 119 ntBASIC0.74□□□□□ -2.29
PTPN22Q9Y2R2 SNORD115-31-201ENST00000365318 82 ntBASIC0.74□□□□□ -2.29
PTPN22Q9Y2R2 RNU6-260P-201ENST00000384092 107 ntBASIC0.74□□□□□ -2.29
PTPN22Q9Y2R2 RNU6-540P-201ENST00000384622 101 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms