Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 MIR517C-201ENST00000385103 95 ntBASIC2.05□□□□□ -2.08
PDZRN3Q9UPQ7 MIR4285-201ENST00000581001 85 ntBASIC2.05□□□□□ -2.08
PDZRN3Q9UPQ7 MIR8074-201ENST00000615081 81 ntBASIC2.05□□□□□ -2.08
PDZRN3Q9UPQ7 MIR302D-201ENST00000362275 68 ntBASIC2.04□□□□□ -2.08
PDZRN3Q9UPQ7 MIR582-201ENST00000365731 98 ntBASIC2.04□□□□□ -2.08
PDZRN3Q9UPQ7 MIR489-201ENST00000384923 84 ntBASIC2.04□□□□□ -2.08
PDZRN3Q9UPQ7 MIR527-201ENST00000385244 85 ntBASIC2.04□□□□□ -2.08
PDZRN3Q9UPQ7 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
PDZRN3Q9UPQ7 AC048334.1-201ENST00000477975 159 ntBASIC2.04□□□□□ -2.08
PDZRN3Q9UPQ7 MIR548AL-201ENST00000578416 97 ntBASIC2.04□□□□□ -2.08
PDZRN3Q9UPQ7 U6.103-201ENST00000637085 61 ntBASIC2.04□□□□□ -2.08
PDZRN3Q9UPQ7 AL021921.1-201ENST00000442774 93 ntBASIC2.03□□□□□ -2.08
PDZRN3Q9UPQ7 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
PDZRN3Q9UPQ7 SNORA7.1-201ENST00000363750 139 ntBASIC2.02□□□□□ -2.09
PDZRN3Q9UPQ7 Y_RNA.363-201ENST00000365529 113 ntBASIC2.02□□□□□ -2.09
PDZRN3Q9UPQ7 RNU6-246P-201ENST00000384702 107 ntBASIC2.02□□□□□ -2.09
PDZRN3Q9UPQ7 SNORD28-201ENST00000384706 75 ntBASIC2.02□□□□□ -2.09
PDZRN3Q9UPQ7 SNORA67.6-201ENST00000391093 99 ntBASIC2.02□□□□□ -2.09
PDZRN3Q9UPQ7 RNU6-518P-201ENST00000516056 96 ntBASIC2.02□□□□□ -2.09
PDZRN3Q9UPQ7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.02□□□□□ -2.09
PDZRN3Q9UPQ7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.02□□□□□ -2.09
PDZRN3Q9UPQ7 AC244669.1-204ENST00000621564 178 ntBASIC2.02□□□□□ -2.09
PDZRN3Q9UPQ7 AC090617.8-201ENST00000623339 167 ntBASIC2.02□□□□□ -2.09
PDZRN3Q9UPQ7 RNU1-42P-201ENST00000364033 160 ntBASIC2.01□□□□□ -2.09
PDZRN3Q9UPQ7 MIR644A-201ENST00000385262 94 ntBASIC2.01□□□□□ -2.09
PDZRN3Q9UPQ7 SCARNA17.3-201ENST00000516381 125 ntBASIC2.01□□□□□ -2.09
PDZRN3Q9UPQ7 MIR548AG1-201ENST00000579932 66 ntBASIC2.01□□□□□ -2.09
PDZRN3Q9UPQ7 MIR8063-201ENST00000621930 81 ntBASIC2.01□□□□□ -2.09
PDZRN3Q9UPQ7 RNU6-726P-201ENST00000364680 107 ntBASIC2□□□□□ -2.09
PDZRN3Q9UPQ7 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC2□□□□□ -2.09
PDZRN3Q9UPQ7 MIR652-201ENST00000385278 98 ntBASIC1.99□□□□□ -2.09
PDZRN3Q9UPQ7 MIR548E-201ENST00000408287 88 ntBASIC1.99□□□□□ -2.09
PDZRN3Q9UPQ7 MIR4639-201ENST00000584938 69 ntBASIC1.99□□□□□ -2.09
PDZRN3Q9UPQ7 MIR520F-201ENST00000384824 87 ntBASIC1.98□□□□□ -2.09
PDZRN3Q9UPQ7 MIR519A2-201ENST00000384990 87 ntBASIC1.98□□□□□ -2.09
PDZRN3Q9UPQ7 MIR100-201ENST00000385259 80 ntBASIC1.98□□□□□ -2.09
PDZRN3Q9UPQ7 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.98□□□□□ -2.09
PDZRN3Q9UPQ7 MIR4421-201ENST00000578133 69 ntBASIC1.98□□□□□ -2.09
PDZRN3Q9UPQ7 SNORD1A-201ENST00000364968 72 ntBASIC1.97□□□□□ -2.09
PDZRN3Q9UPQ7 RNA5SP484-201ENST00000458857 111 ntBASIC1.97□□□□□ -2.09
PDZRN3Q9UPQ7 snoU13.9-201ENST00000458927 103 ntBASIC1.97□□□□□ -2.09
PDZRN3Q9UPQ7 SNORA31.24-201ENST00000517232 57 ntBASIC1.97□□□□□ -2.09
PDZRN3Q9UPQ7 Y_RNA.109-201ENST00000363215 102 ntBASIC1.96□□□□□ -2.1
PDZRN3Q9UPQ7 SNORA8.2-201ENST00000384372 139 ntBASIC1.96□□□□□ -2.1
PDZRN3Q9UPQ7 MIR548L-201ENST00000408303 86 ntBASIC1.96□□□□□ -2.1
PDZRN3Q9UPQ7 RNU7-21P-201ENST00000459430 62 ntBASIC1.96□□□□□ -2.1
PDZRN3Q9UPQ7 AC002350.1-201ENST00000490759 375 ntBASIC1.95□□□□□ -2.1
PDZRN3Q9UPQ7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
PDZRN3Q9UPQ7 MIR1-1-201ENST00000362147 71 ntBASIC1.94□□□□□ -2.1
PDZRN3Q9UPQ7 MIR320A-201ENST00000385302 82 ntBASIC1.94□□□□□ -2.1
PDZRN3Q9UPQ7 RNU6-1206P-201ENST00000516339 103 ntBASIC1.94□□□□□ -2.1
PDZRN3Q9UPQ7 RNU6-135P-201ENST00000516769 101 ntBASIC1.94□□□□□ -2.1
PDZRN3Q9UPQ7 RNU6-894P-201ENST00000517094 105 ntBASIC1.94□□□□□ -2.1
PDZRN3Q9UPQ7 MIR4422-201ENST00000581938 83 ntBASIC1.94□□□□□ -2.1
PDZRN3Q9UPQ7 U6.96-201ENST00000636425 70 ntBASIC1.94□□□□□ -2.1
PDZRN3Q9UPQ7 SNORD33-201ENST00000362761 85 ntBASIC1.93□□□□□ -2.1
PDZRN3Q9UPQ7 MIR516B1-201ENST00000385211 90 ntBASIC1.93□□□□□ -2.1
PDZRN3Q9UPQ7 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
PDZRN3Q9UPQ7 MIR1323-201ENST00000408090 73 ntBASIC1.93□□□□□ -2.1
PDZRN3Q9UPQ7 AC079140.2-201ENST00000506193 142 ntBASIC1.93□□□□□ -2.1
PDZRN3Q9UPQ7 AL512310.8-201ENST00000550183 120 ntBASIC1.93□□□□□ -2.1
PDZRN3Q9UPQ7 MIR548AE1-201ENST00000583292 70 ntBASIC1.93□□□□□ -2.1
PDZRN3Q9UPQ7 RMST_2.1-201ENST00000617263 136 ntBASIC1.93□□□□□ -2.1
PDZRN3Q9UPQ7 RNU6-716P-201ENST00000365621 103 ntBASIC1.92□□□□□ -2.1
PDZRN3Q9UPQ7 Y_RNA.407-201ENST00000383986 113 ntBASIC1.92□□□□□ -2.1
PDZRN3Q9UPQ7 RNU1-78P-201ENST00000391248 165 ntBASIC1.92□□□□□ -2.1
PDZRN3Q9UPQ7 MIR1255B2-201ENST00000408618 67 ntBASIC1.92□□□□□ -2.1
PDZRN3Q9UPQ7 AL591704.2-201ENST00000421658 181 ntBASIC1.92□□□□□ -2.1
PDZRN3Q9UPQ7 AC138207.3-201ENST00000585289 166 ntBASIC1.92□□□□□ -2.1
PDZRN3Q9UPQ7 AC243829.3-201ENST00000622177 108 ntBASIC1.92□□□□□ -2.1
PDZRN3Q9UPQ7 Y_RNA.69-201ENST00000362885 109 ntBASIC1.91□□□□□ -2.1
PDZRN3Q9UPQ7 MIR579-201ENST00000385221 98 ntBASIC1.91□□□□□ -2.1
PDZRN3Q9UPQ7 RNU1-92P-201ENST00000517017 135 ntBASIC1.91□□□□□ -2.1
PDZRN3Q9UPQ7 RNA5SP47-201ENST00000517230 109 ntBASIC1.91□□□□□ -2.1
PDZRN3Q9UPQ7 MIR4452-201ENST00000583004 71 ntBASIC1.91□□□□□ -2.1
PDZRN3Q9UPQ7 RNU6-822P-201ENST00000362707 106 ntBASIC1.9□□□□□ -2.11
PDZRN3Q9UPQ7 RNU6-1204P-201ENST00000363948 107 ntBASIC1.9□□□□□ -2.11
PDZRN3Q9UPQ7 RNU6-1065P-201ENST00000384513 106 ntBASIC1.9□□□□□ -2.11
PDZRN3Q9UPQ7 MIR1304-201ENST00000408243 91 ntBASIC1.9□□□□□ -2.11
PDZRN3Q9UPQ7 MIR1827-201ENST00000408549 66 ntBASIC1.9□□□□□ -2.11
PDZRN3Q9UPQ7 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.9□□□□□ -2.11
PDZRN3Q9UPQ7 MIR3937-201ENST00000580135 106 ntBASIC1.9□□□□□ -2.11
PDZRN3Q9UPQ7 RNU7-160P-201ENST00000516660 62 ntBASIC1.89□□□□□ -2.11
PDZRN3Q9UPQ7 AL353770.2-201ENST00000620024 78 ntBASIC1.89□□□□□ -2.11
PDZRN3Q9UPQ7 SNORD18A-201ENST00000363753 72 ntBASIC1.88□□□□□ -2.11
PDZRN3Q9UPQ7 RNA5SP102-201ENST00000516865 106 ntBASIC1.88□□□□□ -2.11
PDZRN3Q9UPQ7 RNU7-90P-201ENST00000459216 62 ntBASIC1.87□□□□□ -2.11
PDZRN3Q9UPQ7 RNU6-42P-201ENST00000384165 107 ntBASIC1.86□□□□□ -2.11
PDZRN3Q9UPQ7 SNORA80D-201ENST00000384488 135 ntBASIC1.86□□□□□ -2.11
PDZRN3Q9UPQ7 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.86□□□□□ -2.11
PDZRN3Q9UPQ7 RNA5SP61-201ENST00000516453 100 ntBASIC1.86□□□□□ -2.11
PDZRN3Q9UPQ7 RNU7-151P-201ENST00000516930 53 ntBASIC1.86□□□□□ -2.11
PDZRN3Q9UPQ7 AC243829.6-201ENST00000612652 106 ntBASIC1.86□□□□□ -2.11
PDZRN3Q9UPQ7 AL162376.1-201ENST00000624117 175 ntBASIC1.86□□□□□ -2.11
PDZRN3Q9UPQ7 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PDZRN3Q9UPQ7 RNU6-458P-201ENST00000384179 107 ntBASIC1.85□□□□□ -2.11
PDZRN3Q9UPQ7 RNU6-469P-201ENST00000516253 101 ntBASIC1.85□□□□□ -2.11
PDZRN3Q9UPQ7 U6.58-201ENST00000613107 107 ntBASIC1.85□□□□□ -2.11
PDZRN3Q9UPQ7 7SK.11-201ENST00000615477 250 ntBASIC1.85□□□□□ -2.11
PDZRN3Q9UPQ7 RNU6-598P-201ENST00000364017 105 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 191.7 ms