Protein–RNA interactions for Protein: Q9UPN9

TRIM33, E3 ubiquitin-protein ligase TRIM33, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM33Q9UPN9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.17□□□□□ -2.22
TRIM33Q9UPN9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.17□□□□□ -2.22
TRIM33Q9UPN9 MIR4421-201ENST00000578133 69 ntBASIC1.17□□□□□ -2.22
TRIM33Q9UPN9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.17□□□□□ -2.22
TRIM33Q9UPN9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRIM33Q9UPN9 RNA5SP215-201ENST00000363440 122 ntBASIC1.16□□□□□ -2.22
TRIM33Q9UPN9 RNU6-499P-201ENST00000365615 107 ntBASIC1.16□□□□□ -2.22
TRIM33Q9UPN9 Y_RNA.407-201ENST00000383986 113 ntBASIC1.16□□□□□ -2.22
TRIM33Q9UPN9 MIR3660-201ENST00000584845 100 ntBASIC1.16□□□□□ -2.22
TRIM33Q9UPN9 MIR7107-201ENST00000611489 80 ntBASIC1.16□□□□□ -2.22
TRIM33Q9UPN9 Y_RNA.164-201ENST00000363709 102 ntBASIC1.15□□□□□ -2.23
TRIM33Q9UPN9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.15□□□□□ -2.23
TRIM33Q9UPN9 AL353765.1-201ENST00000605514 183 ntBASIC1.15□□□□□ -2.23
TRIM33Q9UPN9 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.15□□□□□ -2.23
TRIM33Q9UPN9 RNU6-1162P-201ENST00000384443 104 ntBASIC1.14□□□□□ -2.23
TRIM33Q9UPN9 AC006210.1-201ENST00000424882 111 ntBASIC1.14□□□□□ -2.23
TRIM33Q9UPN9 OR2A41P-201ENST00000473586 105 ntBASIC1.14□□□□□ -2.23
TRIM33Q9UPN9 SCARNA17.3-201ENST00000516381 125 ntBASIC1.14□□□□□ -2.23
TRIM33Q9UPN9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.13□□□□□ -2.23
TRIM33Q9UPN9 MIR521-2-201ENST00000384818 87 ntBASIC1.13□□□□□ -2.23
TRIM33Q9UPN9 SNORD110-201ENST00000408189 75 ntBASIC1.13□□□□□ -2.23
TRIM33Q9UPN9 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.13□□□□□ -2.23
TRIM33Q9UPN9 RNU6-1089P-201ENST00000516473 104 ntBASIC1.13□□□□□ -2.23
TRIM33Q9UPN9 AC092634.7-201ENST00000621022 103 ntBASIC1.13□□□□□ -2.23
TRIM33Q9UPN9 RNA5SP222-201ENST00000411039 105 ntBASIC1.12□□□□□ -2.23
TRIM33Q9UPN9 TRMT112P2-201ENST00000512910 132 ntBASIC1.12□□□□□ -2.23
TRIM33Q9UPN9 AL353770.2-201ENST00000620024 78 ntBASIC1.12□□□□□ -2.23
TRIM33Q9UPN9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.11□□□□□ -2.23
TRIM33Q9UPN9 SCARNA21.1-201ENST00000515996 128 ntBASIC1.11□□□□□ -2.23
TRIM33Q9UPN9 Y_RNA.676-201ENST00000516393 96 ntBASIC1.11□□□□□ -2.23
TRIM33Q9UPN9 SNORA15B-2-201ENST00000384058 135 ntBASIC1.1□□□□□ -2.23
TRIM33Q9UPN9 SNORA15B-1-201ENST00000384334 135 ntBASIC1.1□□□□□ -2.23
TRIM33Q9UPN9 MIR652-201ENST00000385278 98 ntBASIC1.1□□□□□ -2.23
TRIM33Q9UPN9 RNA5SP299-201ENST00000391203 116 ntBASIC1.1□□□□□ -2.23
TRIM33Q9UPN9 Y_RNA.633-201ENST00000459107 95 ntBASIC1.1□□□□□ -2.23
TRIM33Q9UPN9 AC021146.9-201ENST00000512503 156 ntBASIC1.1□□□□□ -2.23
TRIM33Q9UPN9 MIR4661-201ENST00000582720 75 ntBASIC1.1□□□□□ -2.23
TRIM33Q9UPN9 MIR6078-201ENST00000611069 100 ntBASIC1.1□□□□□ -2.23
TRIM33Q9UPN9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.1□□□□□ -2.23
TRIM33Q9UPN9 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
TRIM33Q9UPN9 RNU6-321P-201ENST00000410912 106 ntBASIC1.09□□□□□ -2.23
TRIM33Q9UPN9 AL157398.1-201ENST00000452981 186 ntBASIC1.09□□□□□ -2.23
TRIM33Q9UPN9 MIR548AE1-201ENST00000583292 70 ntBASIC1.09□□□□□ -2.23
TRIM33Q9UPN9 SNORA25.5-201ENST00000363782 126 ntBASIC1.08□□□□□ -2.24
TRIM33Q9UPN9 SNORA63.6-201ENST00000364921 119 ntBASIC1.08□□□□□ -2.24
TRIM33Q9UPN9 RNU6-302P-201ENST00000365249 107 ntBASIC1.08□□□□□ -2.24
TRIM33Q9UPN9 MTND4LP19-201ENST00000403051 166 ntBASIC1.08□□□□□ -2.24
TRIM33Q9UPN9 MIR4473-201ENST00000583731 91 ntBASIC1.08□□□□□ -2.24
TRIM33Q9UPN9 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
TRIM33Q9UPN9 snoU13.13-201ENST00000458842 104 ntBASIC1.07□□□□□ -2.24
TRIM33Q9UPN9 MIR5706-201ENST00000579841 80 ntBASIC1.07□□□□□ -2.24
TRIM33Q9UPN9 MIR4295-201ENST00000585286 85 ntBASIC1.07□□□□□ -2.24
TRIM33Q9UPN9 SNORA70.25-201ENST00000612741 95 ntBASIC1.06□□□□□ -2.24
TRIM33Q9UPN9 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
TRIM33Q9UPN9 AC103810.9-201ENST00000606688 112 ntBASIC1.05□□□□□ -2.24
TRIM33Q9UPN9 uc_338.10-201ENST00000621872 182 ntBASIC1.05□□□□□ -2.24
TRIM33Q9UPN9 RNU6-940P-201ENST00000363433 104 ntBASIC1.04□□□□□ -2.24
TRIM33Q9UPN9 MIR582-201ENST00000365731 98 ntBASIC1.04□□□□□ -2.24
TRIM33Q9UPN9 MIR140-201ENST00000385282 100 ntBASIC1.04□□□□□ -2.24
TRIM33Q9UPN9 MIR548E-201ENST00000408287 88 ntBASIC1.04□□□□□ -2.24
TRIM33Q9UPN9 RNA5SP192-201ENST00000364404 120 ntBASIC1.03□□□□□ -2.24
TRIM33Q9UPN9 RNA5SP517-201ENST00000364724 117 ntBASIC1.03□□□□□ -2.24
TRIM33Q9UPN9 SNORA36.2-201ENST00000384004 127 ntBASIC1.03□□□□□ -2.24
TRIM33Q9UPN9 AC079150.2-201ENST00000443733 78 ntBASIC1.03□□□□□ -2.24
TRIM33Q9UPN9 MIR4752-201ENST00000579672 72 ntBASIC1.03□□□□□ -2.24
TRIM33Q9UPN9 RNU1-29P-201ENST00000606574 126 ntBASIC1.03□□□□□ -2.24
TRIM33Q9UPN9 SNORA33.1-201ENST00000364957 130 ntBASIC1.02□□□□□ -2.25
TRIM33Q9UPN9 RNY1P8-201ENST00000383970 114 ntBASIC1.02□□□□□ -2.25
TRIM33Q9UPN9 RNU6-987P-201ENST00000384759 104 ntBASIC1.02□□□□□ -2.25
TRIM33Q9UPN9 MIR633-201ENST00000384821 98 ntBASIC1.02□□□□□ -2.25
TRIM33Q9UPN9 ACA64.5-201ENST00000516207 127 ntBASIC1.02□□□□□ -2.25
TRIM33Q9UPN9 SNORD114-21-201ENST00000606412 72 ntBASIC1.02□□□□□ -2.25
TRIM33Q9UPN9 RNU6-392P-201ENST00000364926 101 ntBASIC1.01□□□□□ -2.25
TRIM33Q9UPN9 MIR608-201ENST00000384820 100 ntBASIC1.01□□□□□ -2.25
TRIM33Q9UPN9 HMGN2P22-201ENST00000427588 175 ntBASIC1.01□□□□□ -2.25
TRIM33Q9UPN9 U2.7-201ENST00000619197 100 ntBASIC1.01□□□□□ -2.25
TRIM33Q9UPN9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
TRIM33Q9UPN9 Y_RNA.125-201ENST00000363371 111 ntBASIC1□□□□□ -2.25
TRIM33Q9UPN9 MIR548C-201ENST00000384815 97 ntBASIC1□□□□□ -2.25
TRIM33Q9UPN9 RNU6-92P-201ENST00000605893 104 ntBASIC1□□□□□ -2.25
TRIM33Q9UPN9 SNORD118-201ENST00000363593 134 ntBASIC0.99□□□□□ -2.25
TRIM33Q9UPN9 RNA5SP247-201ENST00000411181 105 ntBASIC0.99□□□□□ -2.25
TRIM33Q9UPN9 AC069271.1-201ENST00000445577 156 ntBASIC0.99□□□□□ -2.25
TRIM33Q9UPN9 MIR466-201ENST00000580653 84 ntBASIC0.99□□□□□ -2.25
TRIM33Q9UPN9 MIR548V-201ENST00000584165 80 ntBASIC0.99□□□□□ -2.25
TRIM33Q9UPN9 RNU6-698P-201ENST00000363523 107 ntBASIC0.98□□□□□ -2.25
TRIM33Q9UPN9 RNU6-34P-201ENST00000364874 107 ntBASIC0.98□□□□□ -2.25
TRIM33Q9UPN9 MIR517B-201ENST00000385102 67 ntBASIC0.98□□□□□ -2.25
TRIM33Q9UPN9 RNU4-37P-201ENST00000410214 84 ntBASIC0.98□□□□□ -2.25
TRIM33Q9UPN9 AC244090.1-201ENST00000441884 93 ntBASIC0.98□□□□□ -2.25
TRIM33Q9UPN9 RNU7-174P-201ENST00000516248 59 ntBASIC0.98□□□□□ -2.25
TRIM33Q9UPN9 RNU6-122P-201ENST00000516818 107 ntBASIC0.98□□□□□ -2.25
TRIM33Q9UPN9 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
TRIM33Q9UPN9 SNORA40.8-201ENST00000411034 126 ntBASIC0.97□□□□□ -2.25
TRIM33Q9UPN9 RPL39P28-201ENST00000465655 155 ntBASIC0.97□□□□□ -2.25
TRIM33Q9UPN9 SNORA25.18-201ENST00000607153 114 ntBASIC0.97□□□□□ -2.25
TRIM33Q9UPN9 U7.6-201ENST00000610841 64 ntBASIC0.97□□□□□ -2.25
TRIM33Q9UPN9 MIR20A-201ENST00000362279 71 ntBASIC0.96□□□□□ -2.26
TRIM33Q9UPN9 SNORD114-27-201ENST00000363766 70 ntBASIC0.96□□□□□ -2.26
TRIM33Q9UPN9 MIR499A-201ENST00000384903 122 ntBASIC0.96□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 243.9 ms