Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 AC067940.1-201ENST00000458411 300 ntBASIC1.79□□□□□ -2.12
COL17A1Q9UMD9 AC008834.1-201ENST00000511612 175 ntBASIC1.79□□□□□ -2.12
COL17A1Q9UMD9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.79□□□□□ -2.12
COL17A1Q9UMD9 MIR125B2-201ENST00000385128 89 ntBASIC1.78□□□□□ -2.12
COL17A1Q9UMD9 MIR216B-201ENST00000390186 82 ntBASIC1.78□□□□□ -2.12
COL17A1Q9UMD9 MIR758-201ENST00000390227 88 ntBASIC1.78□□□□□ -2.12
COL17A1Q9UMD9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
COL17A1Q9UMD9 RNU1-78P-201ENST00000391248 165 ntBASIC1.78□□□□□ -2.12
COL17A1Q9UMD9 RNU6-994P-201ENST00000410507 111 ntBASIC1.78□□□□□ -2.12
COL17A1Q9UMD9 MIR1273G-201ENST00000577677 100 ntBASIC1.78□□□□□ -2.12
COL17A1Q9UMD9 AC211469.2-201ENST00000605461 205 ntBASIC1.78□□□□□ -2.12
COL17A1Q9UMD9 U2.7-201ENST00000619197 100 ntBASIC1.78□□□□□ -2.12
COL17A1Q9UMD9 RNU6-838P-201ENST00000363399 108 ntBASIC1.77□□□□□ -2.13
COL17A1Q9UMD9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.77□□□□□ -2.13
COL17A1Q9UMD9 RNU6-1162P-201ENST00000384443 104 ntBASIC1.77□□□□□ -2.13
COL17A1Q9UMD9 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.77□□□□□ -2.13
COL17A1Q9UMD9 RNA5SP121-201ENST00000516537 101 ntBASIC1.77□□□□□ -2.13
COL17A1Q9UMD9 RN7SKP88-201ENST00000516847 250 ntBASIC1.77□□□□□ -2.13
COL17A1Q9UMD9 SNORA40.16-201ENST00000517238 121 ntBASIC1.77□□□□□ -2.13
COL17A1Q9UMD9 AL512310.8-201ENST00000550183 120 ntBASIC1.77□□□□□ -2.13
COL17A1Q9UMD9 MIR548X-201ENST00000580069 75 ntBASIC1.77□□□□□ -2.13
COL17A1Q9UMD9 7SK.8-201ENST00000612110 250 ntBASIC1.77□□□□□ -2.13
COL17A1Q9UMD9 7SK.11-201ENST00000615477 250 ntBASIC1.77□□□□□ -2.13
COL17A1Q9UMD9 7SK.13-201ENST00000622040 250 ntBASIC1.77□□□□□ -2.13
COL17A1Q9UMD9 RNU6-934P-201ENST00000365154 107 ntBASIC1.76□□□□□ -2.13
COL17A1Q9UMD9 MIR617-201ENST00000385030 97 ntBASIC1.76□□□□□ -2.13
COL17A1Q9UMD9 AC021146.9-201ENST00000512503 156 ntBASIC1.76□□□□□ -2.13
COL17A1Q9UMD9 MIR4771-2-201ENST00000577758 74 ntBASIC1.76□□□□□ -2.13
COL17A1Q9UMD9 MIR3973-201ENST00000579824 107 ntBASIC1.76□□□□□ -2.13
COL17A1Q9UMD9 MIR4771-1-201ENST00000582617 74 ntBASIC1.76□□□□□ -2.13
COL17A1Q9UMD9 MIR521-2-201ENST00000384818 87 ntBASIC1.75□□□□□ -2.13
COL17A1Q9UMD9 MIR519E-201ENST00000385075 84 ntBASIC1.75□□□□□ -2.13
COL17A1Q9UMD9 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
COL17A1Q9UMD9 RNU6-1250P-201ENST00000391218 107 ntBASIC1.75□□□□□ -2.13
COL17A1Q9UMD9 AC087343.1-201ENST00000477341 475 ntBASIC1.75□□□□□ -2.13
COL17A1Q9UMD9 AC018659.1-201ENST00000551083 169 ntBASIC1.75□□□□□ -2.13
COL17A1Q9UMD9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
COL17A1Q9UMD9 RNA5SP257-201ENST00000363023 116 ntBASIC1.75□□□□□ -2.13
COL17A1Q9UMD9 Y_RNA.325-201ENST00000365171 122 ntBASIC1.75□□□□□ -2.13
COL17A1Q9UMD9 MIR7974-201ENST00000615835 79 ntBASIC1.75□□□□□ -2.13
COL17A1Q9UMD9 SNORD115-24-201ENST00000363528 82 ntBASIC1.74□□□□□ -2.13
COL17A1Q9UMD9 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
COL17A1Q9UMD9 RNA5SP403-201ENST00000363598 108 ntBASIC1.73□□□□□ -2.13
COL17A1Q9UMD9 SNORD113.3-201ENST00000364630 78 ntBASIC1.73□□□□□ -2.13
COL17A1Q9UMD9 MIR934-201ENST00000401241 83 ntBASIC1.73□□□□□ -2.13
COL17A1Q9UMD9 HAR1A.1-201ENST00000459583 118 ntBASIC1.73□□□□□ -2.13
COL17A1Q9UMD9 RNU7-161P-201ENST00000517289 62 ntBASIC1.73□□□□□ -2.13
COL17A1Q9UMD9 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.72□□□□□ -2.13
COL17A1Q9UMD9 RPS29P23-201ENST00000458635 123 ntBASIC1.72□□□□□ -2.13
COL17A1Q9UMD9 MIR4295-201ENST00000585286 85 ntBASIC1.72□□□□□ -2.13
COL17A1Q9UMD9 AL590095.2-201ENST00000604136 117 ntBASIC1.72□□□□□ -2.13
COL17A1Q9UMD9 RNU6-1246P-201ENST00000391064 107 ntBASIC1.71□□□□□ -2.14
COL17A1Q9UMD9 SNORA9.1-201ENST00000362412 131 ntBASIC1.7□□□□□ -2.14
COL17A1Q9UMD9 Y_RNA.246-201ENST00000364495 108 ntBASIC1.7□□□□□ -2.14
COL17A1Q9UMD9 RNU6-364P-201ENST00000384387 107 ntBASIC1.7□□□□□ -2.14
COL17A1Q9UMD9 RNU7-104P-201ENST00000459398 79 ntBASIC1.7□□□□□ -2.14
COL17A1Q9UMD9 RNU6-165P-201ENST00000517170 99 ntBASIC1.7□□□□□ -2.14
COL17A1Q9UMD9 MIR4714-201ENST00000580728 77 ntBASIC1.7□□□□□ -2.14
COL17A1Q9UMD9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL17A1Q9UMD9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.7□□□□□ -2.14
COL17A1Q9UMD9 RNU6-986P-201ENST00000363133 102 ntBASIC1.69□□□□□ -2.14
COL17A1Q9UMD9 Y_RNA.250-201ENST00000364542 110 ntBASIC1.69□□□□□ -2.14
COL17A1Q9UMD9 AL591704.2-201ENST00000421658 181 ntBASIC1.69□□□□□ -2.14
COL17A1Q9UMD9 SNORA31.2-201ENST00000516019 134 ntBASIC1.69□□□□□ -2.14
COL17A1Q9UMD9 SNORA31.14-201ENST00000516728 116 ntBASIC1.69□□□□□ -2.14
COL17A1Q9UMD9 MIR4676-201ENST00000583078 72 ntBASIC1.69□□□□□ -2.14
COL17A1Q9UMD9 MIR7110-201ENST00000612638 86 ntBASIC1.69□□□□□ -2.14
COL17A1Q9UMD9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL17A1Q9UMD9 RNU6-810P-201ENST00000364001 107 ntBASIC1.69□□□□□ -2.14
COL17A1Q9UMD9 SNORA33.1-201ENST00000364957 130 ntBASIC1.69□□□□□ -2.14
COL17A1Q9UMD9 SNORD111-201ENST00000408139 94 ntBASIC1.69□□□□□ -2.14
COL17A1Q9UMD9 RNU7-102P-201ENST00000458948 62 ntBASIC1.69□□□□□ -2.14
COL17A1Q9UMD9 Y_RNA.125-201ENST00000363371 111 ntBASIC1.68□□□□□ -2.14
COL17A1Q9UMD9 AC048334.1-201ENST00000477975 159 ntBASIC1.68□□□□□ -2.14
COL17A1Q9UMD9 AC027335.2-201ENST00000624030 375 ntBASIC1.68□□□□□ -2.14
COL17A1Q9UMD9 Y_RNA.32-201ENST00000362589 110 ntBASIC1.67□□□□□ -2.14
COL17A1Q9UMD9 SNORA80D-201ENST00000384488 135 ntBASIC1.67□□□□□ -2.14
COL17A1Q9UMD9 RPS26P5-201ENST00000418544 335 ntBASIC1.67□□□□□ -2.14
COL17A1Q9UMD9 AC036111.3-201ENST00000526389 112 ntBASIC1.67□□□□□ -2.14
COL17A1Q9UMD9 RNU6-997P-201ENST00000384725 107 ntBASIC1.66□□□□□ -2.14
COL17A1Q9UMD9 SNORA40B-201ENST00000385573 128 ntBASIC1.66□□□□□ -2.14
COL17A1Q9UMD9 RNU6-269P-201ENST00000391077 97 ntBASIC1.66□□□□□ -2.14
COL17A1Q9UMD9 RNU7-40P-201ENST00000516397 64 ntBASIC1.66□□□□□ -2.14
COL17A1Q9UMD9 RNA5SP62-201ENST00000363457 110 ntBASIC1.65□□□□□ -2.15
COL17A1Q9UMD9 MT-TY-201ENST00000387409 66 ntBASIC1.65□□□□□ -2.15
COL17A1Q9UMD9 MIR938-201ENST00000401216 83 ntBASIC1.65□□□□□ -2.15
COL17A1Q9UMD9 uc_338.16-201ENST00000621804 95 ntBASIC1.65□□□□□ -2.15
COL17A1Q9UMD9 RNU7-90P-201ENST00000459216 62 ntBASIC1.64□□□□□ -2.15
COL17A1Q9UMD9 RNU5B-6P-201ENST00000516765 68 ntBASIC1.64□□□□□ -2.15
COL17A1Q9UMD9 AC067863.3-201ENST00000624172 122 ntBASIC1.64□□□□□ -2.15
COL17A1Q9UMD9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
COL17A1Q9UMD9 RNU6-247P-201ENST00000362636 107 ntBASIC1.63□□□□□ -2.15
COL17A1Q9UMD9 Y_RNA.633-201ENST00000459107 95 ntBASIC1.63□□□□□ -2.15
COL17A1Q9UMD9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.63□□□□□ -2.15
COL17A1Q9UMD9 MIR4460-201ENST00000577862 86 ntBASIC1.63□□□□□ -2.15
COL17A1Q9UMD9 SNORD116-16-201ENST00000384533 92 ntBASIC1.63□□□□□ -2.15
COL17A1Q9UMD9 MIR4490-201ENST00000582647 84 ntBASIC1.63□□□□□ -2.15
COL17A1Q9UMD9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.63□□□□□ -2.15
COL17A1Q9UMD9 SNORA25.8-201ENST00000364831 128 ntBASIC1.62□□□□□ -2.15
COL17A1Q9UMD9 SNORA15B-2-201ENST00000384058 135 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms