Protein–RNA interactions for Protein: Q9UBU9

NXF1, Nuclear RNA export factor 1, humanhuman

Known RBP Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1Q9UBU9 MIR6779-201ENST00000617283 64 ntBASIC1.83□□□□□ -2.12
NXF1Q9UBU9 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
NXF1Q9UBU9 SNORD114-26-201ENST00000363543 72 ntBASIC1.82□□□□□ -2.12
NXF1Q9UBU9 RNU6-726P-201ENST00000364680 107 ntBASIC1.82□□□□□ -2.12
NXF1Q9UBU9 MIR527-201ENST00000385244 85 ntBASIC1.82□□□□□ -2.12
NXF1Q9UBU9 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
NXF1Q9UBU9 RNU6-172P-201ENST00000411000 93 ntBASIC1.82□□□□□ -2.12
NXF1Q9UBU9 RNU7-21P-201ENST00000459430 62 ntBASIC1.82□□□□□ -2.12
NXF1Q9UBU9 AL512310.8-201ENST00000550183 120 ntBASIC1.82□□□□□ -2.12
NXF1Q9UBU9 MIR4639-201ENST00000584938 69 ntBASIC1.82□□□□□ -2.12
NXF1Q9UBU9 SNORD48-201ENST00000364953 64 ntBASIC1.81□□□□□ -2.12
NXF1Q9UBU9 MIR582-201ENST00000365731 98 ntBASIC1.81□□□□□ -2.12
NXF1Q9UBU9 MIR517C-201ENST00000385103 95 ntBASIC1.81□□□□□ -2.12
NXF1Q9UBU9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NXF1Q9UBU9 RNU6-269P-201ENST00000391077 97 ntBASIC1.81□□□□□ -2.12
NXF1Q9UBU9 AL591704.2-201ENST00000421658 181 ntBASIC1.81□□□□□ -2.12
NXF1Q9UBU9 snoU13.9-201ENST00000458927 103 ntBASIC1.81□□□□□ -2.12
NXF1Q9UBU9 SCARNA17.3-201ENST00000516381 125 ntBASIC1.81□□□□□ -2.12
NXF1Q9UBU9 MIR4452-201ENST00000583004 71 ntBASIC1.81□□□□□ -2.12
NXF1Q9UBU9 MIR502-201ENST00000606349 86 ntBASIC1.81□□□□□ -2.12
NXF1Q9UBU9 RNU6-924P-201ENST00000362926 108 ntBASIC1.8□□□□□ -2.12
NXF1Q9UBU9 SNORD1B-201ENST00000363091 84 ntBASIC1.8□□□□□ -2.12
NXF1Q9UBU9 Y_RNA.327-201ENST00000365201 102 ntBASIC1.8□□□□□ -2.12
NXF1Q9UBU9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.8□□□□□ -2.12
NXF1Q9UBU9 MIR652-201ENST00000385278 98 ntBASIC1.8□□□□□ -2.12
NXF1Q9UBU9 SNORA67.5-201ENST00000391036 107 ntBASIC1.8□□□□□ -2.12
NXF1Q9UBU9 AL021921.1-201ENST00000442774 93 ntBASIC1.8□□□□□ -2.12
NXF1Q9UBU9 RNA5SP484-201ENST00000458857 111 ntBASIC1.8□□□□□ -2.12
NXF1Q9UBU9 AC002350.1-201ENST00000490759 375 ntBASIC1.8□□□□□ -2.12
NXF1Q9UBU9 RNU6-518P-201ENST00000516056 96 ntBASIC1.8□□□□□ -2.12
NXF1Q9UBU9 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
NXF1Q9UBU9 MIR4713-201ENST00000582691 75 ntBASIC1.8□□□□□ -2.12
NXF1Q9UBU9 RMST_2.1-201ENST00000617263 136 ntBASIC1.8□□□□□ -2.12
NXF1Q9UBU9 AC090617.8-201ENST00000623339 167 ntBASIC1.8□□□□□ -2.12
NXF1Q9UBU9 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
NXF1Q9UBU9 RNU6-716P-201ENST00000365621 103 ntBASIC1.79□□□□□ -2.12
NXF1Q9UBU9 MIR548E-201ENST00000408287 88 ntBASIC1.79□□□□□ -2.12
NXF1Q9UBU9 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
NXF1Q9UBU9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
NXF1Q9UBU9 SNORA8.2-201ENST00000384372 139 ntBASIC1.78□□□□□ -2.12
NXF1Q9UBU9 RNU6-246P-201ENST00000384702 107 ntBASIC1.77□□□□□ -2.13
NXF1Q9UBU9 RNU6-135P-201ENST00000516769 101 ntBASIC1.77□□□□□ -2.13
NXF1Q9UBU9 MIR4299-201ENST00000577899 72 ntBASIC1.77□□□□□ -2.13
NXF1Q9UBU9 U6.96-201ENST00000636425 70 ntBASIC1.77□□□□□ -2.13
NXF1Q9UBU9 SNORD33-201ENST00000362761 85 ntBASIC1.76□□□□□ -2.13
NXF1Q9UBU9 MIR519A2-201ENST00000384990 87 ntBASIC1.76□□□□□ -2.13
NXF1Q9UBU9 RNU7-90P-201ENST00000459216 62 ntBASIC1.76□□□□□ -2.13
NXF1Q9UBU9 RN7SKP88-201ENST00000516847 250 ntBASIC1.76□□□□□ -2.13
NXF1Q9UBU9 MIR548AG1-201ENST00000579932 66 ntBASIC1.76□□□□□ -2.13
NXF1Q9UBU9 7SK.8-201ENST00000612110 250 ntBASIC1.76□□□□□ -2.13
NXF1Q9UBU9 7SK.11-201ENST00000615477 250 ntBASIC1.76□□□□□ -2.13
NXF1Q9UBU9 7SK.13-201ENST00000622040 250 ntBASIC1.76□□□□□ -2.13
NXF1Q9UBU9 RNU6-392P-201ENST00000364926 101 ntBASIC1.75□□□□□ -2.13
NXF1Q9UBU9 MIR1827-201ENST00000408549 66 ntBASIC1.75□□□□□ -2.13
NXF1Q9UBU9 MIR4303-201ENST00000581299 66 ntBASIC1.75□□□□□ -2.13
NXF1Q9UBU9 Y_RNA.374-201ENST00000365606 101 ntBASIC1.74□□□□□ -2.13
NXF1Q9UBU9 Y_RNA.407-201ENST00000383986 113 ntBASIC1.74□□□□□ -2.13
NXF1Q9UBU9 SNORA80D-201ENST00000384488 135 ntBASIC1.74□□□□□ -2.13
NXF1Q9UBU9 RNU7-95P-201ENST00000459222 64 ntBASIC1.74□□□□□ -2.13
NXF1Q9UBU9 RNA5SP47-201ENST00000517230 109 ntBASIC1.74□□□□□ -2.13
NXF1Q9UBU9 MIR548AE1-201ENST00000583292 70 ntBASIC1.74□□□□□ -2.13
NXF1Q9UBU9 SNORD18A-201ENST00000363753 72 ntBASIC1.73□□□□□ -2.13
NXF1Q9UBU9 MIR516B1-201ENST00000385211 90 ntBASIC1.73□□□□□ -2.13
NXF1Q9UBU9 RNU6-910P-201ENST00000390844 107 ntBASIC1.73□□□□□ -2.13
NXF1Q9UBU9 RNU6-469P-201ENST00000516253 101 ntBASIC1.73□□□□□ -2.13
NXF1Q9UBU9 MIR548AL-201ENST00000578416 97 ntBASIC1.73□□□□□ -2.13
NXF1Q9UBU9 Y_RNA.109-201ENST00000363215 102 ntBASIC1.72□□□□□ -2.13
NXF1Q9UBU9 MIR1255B2-201ENST00000408618 67 ntBASIC1.72□□□□□ -2.13
NXF1Q9UBU9 MIR4255-201ENST00000579351 72 ntBASIC1.72□□□□□ -2.13
NXF1Q9UBU9 RNU6-696P-201ENST00000390834 107 ntBASIC1.71□□□□□ -2.14
NXF1Q9UBU9 SNORD79.1-201ENST00000516069 84 ntBASIC1.71□□□□□ -2.14
NXF1Q9UBU9 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.7□□□□□ -2.14
NXF1Q9UBU9 MIR6515-201ENST00000619843 57 ntBASIC1.7□□□□□ -2.14
NXF1Q9UBU9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NXF1Q9UBU9 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.69□□□□□ -2.14
NXF1Q9UBU9 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
NXF1Q9UBU9 MIR30A-201ENST00000385092 71 ntBASIC1.69□□□□□ -2.14
NXF1Q9UBU9 MIR579-201ENST00000385221 98 ntBASIC1.69□□□□□ -2.14
NXF1Q9UBU9 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.69□□□□□ -2.14
NXF1Q9UBU9 MIR4473-201ENST00000583731 91 ntBASIC1.69□□□□□ -2.14
NXF1Q9UBU9 AC243829.3-201ENST00000622177 108 ntBASIC1.69□□□□□ -2.14
NXF1Q9UBU9 U6.103-201ENST00000637085 61 ntBASIC1.69□□□□□ -2.14
NXF1Q9UBU9 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.69□□□□□ -2.14
NXF1Q9UBU9 SNORA44.1-201ENST00000517031 108 ntBASIC1.68□□□□□ -2.14
NXF1Q9UBU9 AC243829.6-201ENST00000612652 106 ntBASIC1.68□□□□□ -2.14
NXF1Q9UBU9 AL162376.1-201ENST00000624117 175 ntBASIC1.68□□□□□ -2.14
NXF1Q9UBU9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
NXF1Q9UBU9 AC098934.3-201ENST00000430450 190 ntBASIC1.67□□□□□ -2.14
NXF1Q9UBU9 RNU6-1206P-201ENST00000516339 103 ntBASIC1.67□□□□□ -2.14
NXF1Q9UBU9 RNA5SP102-201ENST00000516865 106 ntBASIC1.67□□□□□ -2.14
NXF1Q9UBU9 SNORD53B-201ENST00000577887 78 ntBASIC1.67□□□□□ -2.14
NXF1Q9UBU9 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.66□□□□□ -2.14
NXF1Q9UBU9 MIR1323-201ENST00000408090 73 ntBASIC1.66□□□□□ -2.14
NXF1Q9UBU9 U7.7-201ENST00000459276 60 ntBASIC1.66□□□□□ -2.14
NXF1Q9UBU9 RNU1-42P-201ENST00000364033 160 ntBASIC1.65□□□□□ -2.15
NXF1Q9UBU9 RNU1-92P-201ENST00000517017 135 ntBASIC1.65□□□□□ -2.15
NXF1Q9UBU9 MIR3678-201ENST00000578455 94 ntBASIC1.65□□□□□ -2.15
NXF1Q9UBU9 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.65□□□□□ -2.15
NXF1Q9UBU9 SNORD114-22-201ENST00000365423 72 ntBASIC1.64□□□□□ -2.15
NXF1Q9UBU9 SNORA67.6-201ENST00000391093 99 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 189.9 ms