Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 RNU6-110P-201ENST00000384508 104 ntBASIC1.1□□□□□ -2.23
CXXC1Q9P0U4 MIR532-201ENST00000385025 91 ntBASIC1.1□□□□□ -2.23
CXXC1Q9P0U4 MT-TY-201ENST00000387409 66 ntBASIC1.1□□□□□ -2.23
CXXC1Q9P0U4 MIR7107-201ENST00000611489 80 ntBASIC1.1□□□□□ -2.23
CXXC1Q9P0U4 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.1□□□□□ -2.23
CXXC1Q9P0U4 RNU4-38P-201ENST00000364472 129 ntBASIC1.09□□□□□ -2.23
CXXC1Q9P0U4 Y_RNA.258-201ENST00000364613 105 ntBASIC1.09□□□□□ -2.23
CXXC1Q9P0U4 SNORA8.1-201ENST00000384250 140 ntBASIC1.09□□□□□ -2.23
CXXC1Q9P0U4 SNORD75.2-201ENST00000408784 58 ntBASIC1.09□□□□□ -2.23
CXXC1Q9P0U4 MIR6513-201ENST00000621188 64 ntBASIC1.09□□□□□ -2.23
CXXC1Q9P0U4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
CXXC1Q9P0U4 RNA5SP62-201ENST00000363457 110 ntBASIC1.08□□□□□ -2.24
CXXC1Q9P0U4 SNORD114-23-201ENST00000363536 72 ntBASIC1.08□□□□□ -2.24
CXXC1Q9P0U4 RNU6-382P-201ENST00000365181 106 ntBASIC1.08□□□□□ -2.24
CXXC1Q9P0U4 RNY1P8-201ENST00000383970 114 ntBASIC1.08□□□□□ -2.24
CXXC1Q9P0U4 RNU6-154P-201ENST00000384306 106 ntBASIC1.08□□□□□ -2.24
CXXC1Q9P0U4 HAR1A.1-201ENST00000459583 118 ntBASIC1.08□□□□□ -2.24
CXXC1Q9P0U4 AC092634.7-201ENST00000621022 103 ntBASIC1.08□□□□□ -2.24
CXXC1Q9P0U4 Y_RNA.545-201ENST00000384652 105 ntBASIC1.07□□□□□ -2.24
CXXC1Q9P0U4 RNA5SP484-201ENST00000458857 111 ntBASIC1.07□□□□□ -2.24
CXXC1Q9P0U4 RNU7-24P-201ENST00000458867 62 ntBASIC1.07□□□□□ -2.24
CXXC1Q9P0U4 RNU6-752P-201ENST00000516376 102 ntBASIC1.07□□□□□ -2.24
CXXC1Q9P0U4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
CXXC1Q9P0U4 RNU6-54P-201ENST00000365563 107 ntBASIC1.06□□□□□ -2.24
CXXC1Q9P0U4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.06□□□□□ -2.24
CXXC1Q9P0U4 MIR4698-201ENST00000577795 80 ntBASIC1.06□□□□□ -2.24
CXXC1Q9P0U4 MIR4714-201ENST00000580728 77 ntBASIC1.06□□□□□ -2.24
CXXC1Q9P0U4 AC069503.3-201ENST00000618674 145 ntBASIC1.06□□□□□ -2.24
CXXC1Q9P0U4 Y_RNA.788-201ENST00000622394 112 ntBASIC1.06□□□□□ -2.24
CXXC1Q9P0U4 RNU6-495P-201ENST00000362995 107 ntBASIC1.05□□□□□ -2.24
CXXC1Q9P0U4 RNA5SP517-201ENST00000364724 117 ntBASIC1.05□□□□□ -2.24
CXXC1Q9P0U4 RNU6-411P-201ENST00000384451 107 ntBASIC1.05□□□□□ -2.24
CXXC1Q9P0U4 PSMC1P5-201ENST00000512850 177 ntBASIC1.05□□□□□ -2.24
CXXC1Q9P0U4 RNU6-70P-201ENST00000516438 60 ntBASIC1.05□□□□□ -2.24
CXXC1Q9P0U4 NAMPTP3-201ENST00000569273 224 ntBASIC1.05□□□□□ -2.24
CXXC1Q9P0U4 SNORD71-201ENST00000411292 86 ntBASIC1.04□□□□□ -2.24
CXXC1Q9P0U4 AC006210.1-201ENST00000424882 111 ntBASIC1.04□□□□□ -2.24
CXXC1Q9P0U4 AL691482.2-201ENST00000457453 84 ntBASIC1.04□□□□□ -2.24
CXXC1Q9P0U4 MIR3134-201ENST00000579433 74 ntBASIC1.04□□□□□ -2.24
CXXC1Q9P0U4 MIR3675-201ENST00000583661 73 ntBASIC1.04□□□□□ -2.24
CXXC1Q9P0U4 MIR8087-201ENST00000612745 78 ntBASIC1.04□□□□□ -2.24
CXXC1Q9P0U4 MIR936-201ENST00000401264 98 ntBASIC1.03□□□□□ -2.24
CXXC1Q9P0U4 MIR1285-1-201ENST00000408593 84 ntBASIC1.03□□□□□ -2.24
CXXC1Q9P0U4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
CXXC1Q9P0U4 SNORA40.8-201ENST00000411034 126 ntBASIC1.02□□□□□ -2.25
CXXC1Q9P0U4 SNORA25.18-201ENST00000607153 114 ntBASIC1.01□□□□□ -2.25
CXXC1Q9P0U4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1□□□□□ -2.25
CXXC1Q9P0U4 MIR330-201ENST00000362196 94 ntBASIC1□□□□□ -2.25
CXXC1Q9P0U4 SNORD114-4-201ENST00000363962 75 ntBASIC1□□□□□ -2.25
CXXC1Q9P0U4 Y_RNA.565-201ENST00000384719 101 ntBASIC1□□□□□ -2.25
CXXC1Q9P0U4 SNORD110-201ENST00000408189 75 ntBASIC1□□□□□ -2.25
CXXC1Q9P0U4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC1□□□□□ -2.25
CXXC1Q9P0U4 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1□□□□□ -2.25
CXXC1Q9P0U4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
CXXC1Q9P0U4 RNU6-330P-201ENST00000363015 107 ntBASIC0.99□□□□□ -2.25
CXXC1Q9P0U4 RNU5B-6P-201ENST00000516765 68 ntBASIC0.99□□□□□ -2.25
CXXC1Q9P0U4 SNORD118-201ENST00000363593 134 ntBASIC0.97□□□□□ -2.25
CXXC1Q9P0U4 RNU6-1039P-201ENST00000383931 107 ntBASIC0.97□□□□□ -2.25
CXXC1Q9P0U4 RNU6-871P-201ENST00000516122 100 ntBASIC0.97□□□□□ -2.25
CXXC1Q9P0U4 MIR6509-201ENST00000614603 85 ntBASIC0.97□□□□□ -2.25
CXXC1Q9P0U4 RNU6-35P-201ENST00000384530 107 ntBASIC0.96□□□□□ -2.26
CXXC1Q9P0U4 RNU6-587P-201ENST00000391282 106 ntBASIC0.96□□□□□ -2.26
CXXC1Q9P0U4 MIR664A-201ENST00000626086 82 ntBASIC0.96□□□□□ -2.26
CXXC1Q9P0U4 MIR154-201ENST00000385243 84 ntBASIC0.95□□□□□ -2.26
CXXC1Q9P0U4 AC073261.1-201ENST00000429409 121 ntBASIC0.95□□□□□ -2.26
CXXC1Q9P0U4 MIR518A1-201ENST00000385068 85 ntBASIC0.94□□□□□ -2.26
CXXC1Q9P0U4 AC069271.1-201ENST00000445577 156 ntBASIC0.94□□□□□ -2.26
CXXC1Q9P0U4 SNORD42B-201ENST00000458893 67 ntBASIC0.94□□□□□ -2.26
CXXC1Q9P0U4 MIR4752-201ENST00000579672 72 ntBASIC0.94□□□□□ -2.26
CXXC1Q9P0U4 MIR5706-201ENST00000579841 80 ntBASIC0.94□□□□□ -2.26
CXXC1Q9P0U4 Y_RNA.407-201ENST00000383986 113 ntBASIC0.93□□□□□ -2.26
CXXC1Q9P0U4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.93□□□□□ -2.26
CXXC1Q9P0U4 RNU6-1241P-201ENST00000384536 107 ntBASIC0.92□□□□□ -2.26
CXXC1Q9P0U4 RNA5SP193-201ENST00000410353 107 ntBASIC0.92□□□□□ -2.26
CXXC1Q9P0U4 RNU6-1015P-201ENST00000517121 99 ntBASIC0.92□□□□□ -2.26
CXXC1Q9P0U4 AC018659.1-201ENST00000551083 169 ntBASIC0.92□□□□□ -2.26
CXXC1Q9P0U4 MIR4711-201ENST00000578274 70 ntBASIC0.92□□□□□ -2.26
CXXC1Q9P0U4 MIR4473-201ENST00000583731 91 ntBASIC0.92□□□□□ -2.26
CXXC1Q9P0U4 AC103810.9-201ENST00000606688 112 ntBASIC0.92□□□□□ -2.26
CXXC1Q9P0U4 U7.6-201ENST00000610841 64 ntBASIC0.92□□□□□ -2.26
CXXC1Q9P0U4 SNORA70.25-201ENST00000612741 95 ntBASIC0.92□□□□□ -2.26
CXXC1Q9P0U4 MIR8053-201ENST00000613344 75 ntBASIC0.92□□□□□ -2.26
CXXC1Q9P0U4 SNORD45.1-201ENST00000363181 77 ntBASIC0.91□□□□□ -2.26
CXXC1Q9P0U4 MIR1197-201ENST00000408818 88 ntBASIC0.91□□□□□ -2.26
CXXC1Q9P0U4 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.91□□□□□ -2.26
CXXC1Q9P0U4 RNU6-687P-201ENST00000516443 89 ntBASIC0.9□□□□□ -2.27
CXXC1Q9P0U4 MIR4653-201ENST00000585107 83 ntBASIC0.9□□□□□ -2.27
CXXC1Q9P0U4 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
CXXC1Q9P0U4 SNORA2A-201ENST00000383885 135 ntBASIC0.89□□□□□ -2.27
CXXC1Q9P0U4 MIR203A-201ENST00000384836 110 ntBASIC0.89□□□□□ -2.27
CXXC1Q9P0U4 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
CXXC1Q9P0U4 RNU6-260P-201ENST00000384092 107 ntBASIC0.88□□□□□ -2.27
CXXC1Q9P0U4 RNU6-523P-201ENST00000516304 54 ntBASIC0.88□□□□□ -2.27
CXXC1Q9P0U4 RNU6-229P-201ENST00000516614 102 ntBASIC0.88□□□□□ -2.27
CXXC1Q9P0U4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.87□□□□□ -2.27
CXXC1Q9P0U4 RNU6-634P-201ENST00000459134 106 ntBASIC0.87□□□□□ -2.27
CXXC1Q9P0U4 uc_338.10-201ENST00000621872 182 ntBASIC0.87□□□□□ -2.27
CXXC1Q9P0U4 MIR6086-201ENST00000638065 55 ntBASIC0.87□□□□□ -2.27
CXXC1Q9P0U4 RNU6-945P-201ENST00000383947 107 ntBASIC0.86□□□□□ -2.27
CXXC1Q9P0U4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms