Protein–RNA interactions for Protein: Q9NZ43

USE1, Vesicle transport protein USE1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USE1Q9NZ43 Y_RNA.419-201ENST00000384041 102 ntBASIC-2.67□□□□□ -2.84
USE1Q9NZ43 Y_RNA.512-201ENST00000384518 102 ntBASIC-2.67□□□□□ -2.84
USE1Q9NZ43 SNORD19-201ENST00000391191 68 ntBASIC-2.67□□□□□ -2.84
USE1Q9NZ43 MIR548P-201ENST00000408336 84 ntBASIC-2.67□□□□□ -2.84
USE1Q9NZ43 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.67□□□□□ -2.84
USE1Q9NZ43 Y_RNA.684-201ENST00000516510 99 ntBASIC-2.67□□□□□ -2.84
USE1Q9NZ43 U6.104-201ENST00000637979 90 ntBASIC-2.67□□□□□ -2.84
USE1Q9NZ43 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.68□□□□□ -2.84
USE1Q9NZ43 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.68□□□□□ -2.84
USE1Q9NZ43 MIR1302-6-201ENST00000408466 90 ntBASIC-2.68□□□□□ -2.84
USE1Q9NZ43 RNU7-154P-201ENST00000516194 62 ntBASIC-2.68□□□□□ -2.84
USE1Q9NZ43 AC006254.2-201ENST00000603259 279 ntBASIC-2.68□□□□□ -2.84
USE1Q9NZ43 MIR3658-201ENST00000636291 56 ntBASIC-2.68□□□□□ -2.84
USE1Q9NZ43 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.69□□□□□ -2.84
USE1Q9NZ43 AL513043.2-201ENST00000573941 143 ntBASIC-2.69□□□□□ -2.84
USE1Q9NZ43 AC104996.3-201ENST00000590718 94 ntBASIC-2.69□□□□□ -2.84
USE1Q9NZ43 RNU6-382P-201ENST00000365181 106 ntBASIC-2.7□□□□□ -2.84
USE1Q9NZ43 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.7□□□□□ -2.84
USE1Q9NZ43 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.7□□□□□ -2.84
USE1Q9NZ43 MIR1263-201ENST00000408324 86 ntBASIC-2.7□□□□□ -2.84
USE1Q9NZ43 RNA5SP136-201ENST00000410906 107 ntBASIC-2.7□□□□□ -2.84
USE1Q9NZ43 RNU6-79P-201ENST00000362511 107 ntBASIC-2.71□□□□□ -2.84
USE1Q9NZ43 RNU6-312P-201ENST00000364629 107 ntBASIC-2.71□□□□□ -2.84
USE1Q9NZ43 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.71□□□□□ -2.84
USE1Q9NZ43 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.71□□□□□ -2.84
USE1Q9NZ43 RNU6-880P-201ENST00000384526 107 ntBASIC-2.71□□□□□ -2.84
USE1Q9NZ43 MIR203A-201ENST00000384836 110 ntBASIC-2.71□□□□□ -2.84
USE1Q9NZ43 MIR487B-201ENST00000385021 84 ntBASIC-2.71□□□□□ -2.84
USE1Q9NZ43 RNU6-816P-201ENST00000390914 107 ntBASIC-2.71□□□□□ -2.84
USE1Q9NZ43 RNU6-1268P-201ENST00000391214 107 ntBASIC-2.71□□□□□ -2.84
USE1Q9NZ43 RNU6-1239P-201ENST00000391310 107 ntBASIC-2.71□□□□□ -2.84
USE1Q9NZ43 MIR3121-201ENST00000579680 77 ntBASIC-2.71□□□□□ -2.84
USE1Q9NZ43 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.72□□□□□ -2.84
USE1Q9NZ43 Y_RNA.431-201ENST00000384086 102 ntBASIC-2.72□□□□□ -2.84
USE1Q9NZ43 RNU6-228P-201ENST00000362700 106 ntBASIC-2.73□□□□□ -2.85
USE1Q9NZ43 RNU6-774P-201ENST00000363238 107 ntBASIC-2.74□□□□□ -2.85
USE1Q9NZ43 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.74□□□□□ -2.85
USE1Q9NZ43 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.74□□□□□ -2.85
USE1Q9NZ43 MIR6509-201ENST00000614603 85 ntBASIC-2.74□□□□□ -2.85
USE1Q9NZ43 AL160413.1-201ENST00000622780 310 ntBASIC-2.74□□□□□ -2.85
USE1Q9NZ43 MIR519A2-201ENST00000384990 87 ntBASIC-2.75□□□□□ -2.85
USE1Q9NZ43 AC108019.1-201ENST00000512540 175 ntBASIC-2.75□□□□□ -2.85
USE1Q9NZ43 RNU6-1137P-201ENST00000517073 99 ntBASIC-2.75□□□□□ -2.85
USE1Q9NZ43 MIR4773-1-201ENST00000637203 78 ntBASIC-2.75□□□□□ -2.85
USE1Q9NZ43 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.76□□□□□ -2.85
USE1Q9NZ43 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.76□□□□□ -2.85
USE1Q9NZ43 RNU6-239P-201ENST00000390990 99 ntBASIC-2.76□□□□□ -2.85
USE1Q9NZ43 RNU6-918P-201ENST00000391219 106 ntBASIC-2.76□□□□□ -2.85
USE1Q9NZ43 RBMX2P4-201ENST00000441256 376 ntBASIC-2.77□□□□□ -2.85
USE1Q9NZ43 MIR3657-201ENST00000584818 117 ntBASIC-2.77□□□□□ -2.85
USE1Q9NZ43 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.77□□□□□ -2.85
USE1Q9NZ43 MIR8062-201ENST00000621515 85 ntBASIC-2.77□□□□□ -2.85
USE1Q9NZ43 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.78□□□□□ -2.85
USE1Q9NZ43 MTND2P23-201ENST00000422990 651 ntBASIC-2.78□□□□□ -2.85
USE1Q9NZ43 AC130289.1-201ENST00000577321 73 ntBASIC-2.78□□□□□ -2.85
USE1Q9NZ43 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.79□□□□□ -2.86
USE1Q9NZ43 SNORD90-201ENST00000391145 111 ntBASIC-2.79□□□□□ -2.86
USE1Q9NZ43 RNU7-88P-201ENST00000458752 63 ntBASIC-2.79□□□□□ -2.86
USE1Q9NZ43 RNU6-62P-201ENST00000516526 102 ntBASIC-2.79□□□□□ -2.86
USE1Q9NZ43 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.79□□□□□ -2.86
USE1Q9NZ43 U7.5-201ENST00000517224 61 ntBASIC-2.79□□□□□ -2.86
USE1Q9NZ43 RNU6-238P-201ENST00000363313 106 ntBASIC-2.8□□□□□ -2.86
USE1Q9NZ43 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.8□□□□□ -2.86
USE1Q9NZ43 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.8□□□□□ -2.86
USE1Q9NZ43 MIR577-201ENST00000385196 96 ntBASIC-2.8□□□□□ -2.86
USE1Q9NZ43 RNU6-985P-201ENST00000410182 104 ntBASIC-2.8□□□□□ -2.86
USE1Q9NZ43 MTATP6P29-201ENST00000415057 132 ntBASIC-2.8□□□□□ -2.86
USE1Q9NZ43 RNU7-121P-201ENST00000516604 62 ntBASIC-2.8□□□□□ -2.86
USE1Q9NZ43 MIR548Z-201ENST00000584743 97 ntBASIC-2.8□□□□□ -2.86
USE1Q9NZ43 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.81□□□□□ -2.86
USE1Q9NZ43 SNORA19.1-201ENST00000410656 129 ntBASIC-2.81□□□□□ -2.86
USE1Q9NZ43 SNORD4B-201ENST00000459083 72 ntBASIC-2.81□□□□□ -2.86
USE1Q9NZ43 RNU6-518P-201ENST00000516056 96 ntBASIC-2.81□□□□□ -2.86
USE1Q9NZ43 MIR521-2-201ENST00000384818 87 ntBASIC-2.82□□□□□ -2.86
USE1Q9NZ43 RNA5SP292-201ENST00000390974 118 ntBASIC-2.82□□□□□ -2.86
USE1Q9NZ43 MTND4P29-201ENST00000503122 1372 ntBASIC-2.83□□□□□ -2.86
USE1Q9NZ43 Y_RNA.216-201ENST00000364205 93 ntBASIC-2.83□□□□□ -2.86
USE1Q9NZ43 RNU6-695P-201ENST00000391157 104 ntBASIC-2.83□□□□□ -2.86
USE1Q9NZ43 AL691482.2-201ENST00000457453 84 ntBASIC-2.83□□□□□ -2.86
USE1Q9NZ43 RNU6-824P-201ENST00000363724 104 ntBASIC-2.84□□□□□ -2.86
USE1Q9NZ43 RNU6-915P-201ENST00000364943 103 ntBASIC-2.84□□□□□ -2.86
USE1Q9NZ43 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.84□□□□□ -2.86
USE1Q9NZ43 RNU6-635P-201ENST00000516651 102 ntBASIC-2.84□□□□□ -2.86
USE1Q9NZ43 RNU6-151P-201ENST00000364158 107 ntBASIC-2.85□□□□□ -2.87
USE1Q9NZ43 MIR548Q-201ENST00000408404 100 ntBASIC-2.85□□□□□ -2.87
USE1Q9NZ43 MIR548I1-201ENST00000408810 149 ntBASIC-2.85□□□□□ -2.87
USE1Q9NZ43 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.85□□□□□ -2.87
USE1Q9NZ43 MIR664B-201ENST00000626756 61 ntBASIC-2.85□□□□□ -2.87
USE1Q9NZ43 AC134503.1-201ENST00000633048 54 ntBASIC-2.85□□□□□ -2.87
USE1Q9NZ43 RNU6-644P-201ENST00000391155 98 ntBASIC-2.86□□□□□ -2.87
USE1Q9NZ43 SNORA18.5-201ENST00000516616 101 ntBASIC-2.86□□□□□ -2.87
USE1Q9NZ43 MIR4756-201ENST00000577874 78 ntBASIC-2.86□□□□□ -2.87
USE1Q9NZ43 MIR4694-201ENST00000578534 80 ntBASIC-2.86□□□□□ -2.87
USE1Q9NZ43 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.87□□□□□ -2.87
USE1Q9NZ43 RNU6-246P-201ENST00000384702 107 ntBASIC-2.87□□□□□ -2.87
USE1Q9NZ43 RNU2-38P-201ENST00000410856 79 ntBASIC-2.87□□□□□ -2.87
USE1Q9NZ43 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.87□□□□□ -2.87
USE1Q9NZ43 RNU5F-1-201ENST00000362507 117 ntBASIC-2.88□□□□□ -2.87
USE1Q9NZ43 RNU6-832P-201ENST00000363319 107 ntBASIC-2.88□□□□□ -2.87
USE1Q9NZ43 MT-TD-201ENST00000387419 68 ntBASIC-2.88□□□□□ -2.87
Retrieved 100 of 98,524 protein–RNA pairs in 243 ms