Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 MIR450A2-201ENST00000385022 100 ntBASIC0.4□□□□□ -2.35
CCM2LQ9NUG4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
CCM2LQ9NUG4 RNA5SP63-201ENST00000391225 112 ntBASIC0.4□□□□□ -2.35
CCM2LQ9NUG4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.4□□□□□ -2.35
CCM2LQ9NUG4 SNORA9.1-201ENST00000362412 131 ntBASIC0.39□□□□□ -2.35
CCM2LQ9NUG4 RNU6-497P-201ENST00000365316 104 ntBASIC0.39□□□□□ -2.35
CCM2LQ9NUG4 AC022137.1-201ENST00000483735 151 ntBASIC0.39□□□□□ -2.35
CCM2LQ9NUG4 AC093729.1-201ENST00000513074 128 ntBASIC0.39□□□□□ -2.35
CCM2LQ9NUG4 SNORA25.13-201ENST00000516395 103 ntBASIC0.39□□□□□ -2.35
CCM2LQ9NUG4 RNA5SP285-201ENST00000516619 119 ntBASIC0.39□□□□□ -2.35
CCM2LQ9NUG4 AC062037.1-201ENST00000605302 128 ntBASIC0.39□□□□□ -2.35
CCM2LQ9NUG4 RNU5F-1-201ENST00000362507 117 ntBASIC0.38□□□□□ -2.35
CCM2LQ9NUG4 RNY4P3-201ENST00000365254 95 ntBASIC0.38□□□□□ -2.35
CCM2LQ9NUG4 RNA5SP128-201ENST00000365305 116 ntBASIC0.38□□□□□ -2.35
CCM2LQ9NUG4 RNU6-54P-201ENST00000365563 107 ntBASIC0.38□□□□□ -2.35
CCM2LQ9NUG4 MT-TY-201ENST00000387409 66 ntBASIC0.38□□□□□ -2.35
CCM2LQ9NUG4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.38□□□□□ -2.35
CCM2LQ9NUG4 MIR4679-1-201ENST00000637619 75 ntBASIC0.38□□□□□ -2.35
CCM2LQ9NUG4 snoU13.17-201ENST00000458802 104 ntBASIC0.37□□□□□ -2.35
CCM2LQ9NUG4 RNU6ATAC17P-201ENST00000516074 71 ntBASIC0.37□□□□□ -2.35
CCM2LQ9NUG4 MIR5588-201ENST00000581890 63 ntBASIC0.37□□□□□ -2.35
CCM2LQ9NUG4 MIR548O2-201ENST00000616090 70 ntBASIC0.37□□□□□ -2.35
CCM2LQ9NUG4 MIR499B-201ENST00000636498 73 ntBASIC0.37□□□□□ -2.35
CCM2LQ9NUG4 AC006160.2-201ENST00000637708 154 ntBASIC0.37□□□□□ -2.35
CCM2LQ9NUG4 MIR6086-201ENST00000638065 55 ntBASIC0.37□□□□□ -2.35
CCM2LQ9NUG4 RNU6-815P-201ENST00000384080 113 ntBASIC0.36□□□□□ -2.35
CCM2LQ9NUG4 HMGN2P22-201ENST00000427588 175 ntBASIC0.36□□□□□ -2.35
CCM2LQ9NUG4 AC023932.2-201ENST00000603176 175 ntBASIC0.36□□□□□ -2.35
CCM2LQ9NUG4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
CCM2LQ9NUG4 RNU6-1108P-201ENST00000516308 104 ntBASIC0.35□□□□□ -2.35
CCM2LQ9NUG4 RNA5SP134-201ENST00000516492 96 ntBASIC0.35□□□□□ -2.35
CCM2LQ9NUG4 AC069113.3-201ENST00000521019 150 ntBASIC0.35□□□□□ -2.35
CCM2LQ9NUG4 MIR501-201ENST00000390204 84 ntBASIC0.34□□□□□ -2.36
CCM2LQ9NUG4 AC108740.1-201ENST00000498629 225 ntBASIC0.34□□□□□ -2.36
CCM2LQ9NUG4 AC140658.3-201ENST00000567603 271 ntBASIC0.34□□□□□ -2.36
CCM2LQ9NUG4 MIR548AE1-201ENST00000583292 70 ntBASIC0.34□□□□□ -2.36
CCM2LQ9NUG4 RNU6-161P-201ENST00000363051 106 ntBASIC0.33□□□□□ -2.36
CCM2LQ9NUG4 SNORA24B-201ENST00000384176 131 ntBASIC0.33□□□□□ -2.36
CCM2LQ9NUG4 AL450471.1-201ENST00000447509 127 ntBASIC0.33□□□□□ -2.36
CCM2LQ9NUG4 Y_RNA.125-201ENST00000363371 111 ntBASIC0.32□□□□□ -2.36
CCM2LQ9NUG4 RNU6-979P-201ENST00000383896 107 ntBASIC0.32□□□□□ -2.36
CCM2LQ9NUG4 Y_RNA.426-201ENST00000384068 113 ntBASIC0.32□□□□□ -2.36
CCM2LQ9NUG4 Y_RNA.437-201ENST00000384113 113 ntBASIC0.32□□□□□ -2.36
CCM2LQ9NUG4 SNORA26.2-201ENST00000390922 122 ntBASIC0.32□□□□□ -2.36
CCM2LQ9NUG4 RNU6-1177P-201ENST00000391058 104 ntBASIC0.32□□□□□ -2.36
CCM2LQ9NUG4 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.32□□□□□ -2.36
CCM2LQ9NUG4 RNU6-208P-201ENST00000362431 107 ntBASIC0.31□□□□□ -2.36
CCM2LQ9NUG4 RNU6-242P-201ENST00000384359 107 ntBASIC0.31□□□□□ -2.36
CCM2LQ9NUG4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CCM2LQ9NUG4 RNY4P29-201ENST00000410801 97 ntBASIC0.31□□□□□ -2.36
CCM2LQ9NUG4 MIR4315-1-201ENST00000636800 73 ntBASIC0.31□□□□□ -2.36
CCM2LQ9NUG4 MIR4315-2-201ENST00000640925 73 ntBASIC0.31□□□□□ -2.36
CCM2LQ9NUG4 RNU6-820P-201ENST00000384273 107 ntBASIC0.3□□□□□ -2.36
CCM2LQ9NUG4 MIR643-201ENST00000385267 97 ntBASIC0.3□□□□□ -2.36
CCM2LQ9NUG4 RNU6-592P-201ENST00000411333 103 ntBASIC0.3□□□□□ -2.36
CCM2LQ9NUG4 MIR4677-201ENST00000584153 80 ntBASIC0.3□□□□□ -2.36
CCM2LQ9NUG4 MIR548AD-201ENST00000584780 82 ntBASIC0.3□□□□□ -2.36
CCM2LQ9NUG4 MIR4773-1-201ENST00000637203 78 ntBASIC0.3□□□□□ -2.36
CCM2LQ9NUG4 RNU6-824P-201ENST00000363724 104 ntBASIC0.29□□□□□ -2.36
CCM2LQ9NUG4 RNU6-1276P-201ENST00000365372 104 ntBASIC0.29□□□□□ -2.36
CCM2LQ9NUG4 Y_RNA.371-201ENST00000365591 113 ntBASIC0.29□□□□□ -2.36
CCM2LQ9NUG4 Y_RNA.388-201ENST00000383919 113 ntBASIC0.29□□□□□ -2.36
CCM2LQ9NUG4 Y_RNA.407-201ENST00000383986 113 ntBASIC0.29□□□□□ -2.36
CCM2LQ9NUG4 MIR516B1-201ENST00000385211 90 ntBASIC0.29□□□□□ -2.36
CCM2LQ9NUG4 RNU6-127P-201ENST00000390897 107 ntBASIC0.29□□□□□ -2.36
CCM2LQ9NUG4 SNORD77.2-201ENST00000391045 68 ntBASIC0.29□□□□□ -2.36
CCM2LQ9NUG4 SNORD42B-201ENST00000458893 67 ntBASIC0.29□□□□□ -2.36
CCM2LQ9NUG4 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.28□□□□□ -2.36
CCM2LQ9NUG4 Y_RNA.607-201ENST00000410597 98 ntBASIC0.28□□□□□ -2.36
CCM2LQ9NUG4 uc_338.10-201ENST00000621872 182 ntBASIC0.28□□□□□ -2.36
CCM2LQ9NUG4 RNA5SP173-201ENST00000364857 136 ntBASIC0.27□□□□□ -2.37
CCM2LQ9NUG4 RNU6-382P-201ENST00000365181 106 ntBASIC0.27□□□□□ -2.37
CCM2LQ9NUG4 RNU6-154P-201ENST00000384306 106 ntBASIC0.27□□□□□ -2.37
CCM2LQ9NUG4 MIR329-2-201ENST00000385029 84 ntBASIC0.27□□□□□ -2.37
CCM2LQ9NUG4 MIR6759-201ENST00000638110 65 ntBASIC0.27□□□□□ -2.37
CCM2LQ9NUG4 RNU6-624P-201ENST00000363411 107 ntBASIC0.26□□□□□ -2.37
CCM2LQ9NUG4 MIR652-201ENST00000385278 98 ntBASIC0.26□□□□□ -2.37
CCM2LQ9NUG4 RNU7-171P-201ENST00000459581 62 ntBASIC0.26□□□□□ -2.37
CCM2LQ9NUG4 AC097510.1-201ENST00000510945 133 ntBASIC0.26□□□□□ -2.37
CCM2LQ9NUG4 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.26□□□□□ -2.37
CCM2LQ9NUG4 RNU6-495P-201ENST00000362995 107 ntBASIC0.25□□□□□ -2.37
CCM2LQ9NUG4 RNU6-478P-201ENST00000363904 110 ntBASIC0.25□□□□□ -2.37
CCM2LQ9NUG4 Y_RNA.316-201ENST00000365118 111 ntBASIC0.25□□□□□ -2.37
CCM2LQ9NUG4 RNU6-652P-201ENST00000365488 107 ntBASIC0.25□□□□□ -2.37
CCM2LQ9NUG4 RNU6-573P-201ENST00000383938 106 ntBASIC0.25□□□□□ -2.37
CCM2LQ9NUG4 RNU6-129P-201ENST00000391022 107 ntBASIC0.25□□□□□ -2.37
CCM2LQ9NUG4 MIR4636-201ENST00000582271 80 ntBASIC0.25□□□□□ -2.37
CCM2LQ9NUG4 MIR3925-201ENST00000584674 77 ntBASIC0.25□□□□□ -2.37
CCM2LQ9NUG4 MIR6718-201ENST00000616153 80 ntBASIC0.25□□□□□ -2.37
CCM2LQ9NUG4 AC084368.1-201ENST00000620935 65 ntBASIC0.25□□□□□ -2.37
CCM2LQ9NUG4 Y_RNA.12-201ENST00000362393 112 ntBASIC0.24□□□□□ -2.37
CCM2LQ9NUG4 MIR1265-201ENST00000408444 86 ntBASIC0.24□□□□□ -2.37
CCM2LQ9NUG4 SNORD75.2-201ENST00000408784 58 ntBASIC0.24□□□□□ -2.37
CCM2LQ9NUG4 RNU6-782P-201ENST00000516852 104 ntBASIC0.24□□□□□ -2.37
CCM2LQ9NUG4 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
CCM2LQ9NUG4 SNORA42.1-201ENST00000363515 137 ntBASIC0.23□□□□□ -2.37
CCM2LQ9NUG4 SNORA75.1-201ENST00000391130 148 ntBASIC0.23□□□□□ -2.37
CCM2LQ9NUG4 RNA5SP299-201ENST00000391203 116 ntBASIC0.23□□□□□ -2.37
CCM2LQ9NUG4 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.23□□□□□ -2.37
CCM2LQ9NUG4 RNU7-188P-201ENST00000517063 64 ntBASIC0.23□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 343.2 ms