Protein–RNA interactions for Protein: Q9H7M6

ZSWIM4, Zinc finger SWIM domain-containing protein 4, humanhuman

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4Q9H7M6 RNA5SP395-201ENST00000516567 118 ntBASIC0.4□□□□□ -2.35
ZSWIM4Q9H7M6 SNORA9.1-201ENST00000362412 131 ntBASIC0.39□□□□□ -2.35
ZSWIM4Q9H7M6 VTRNA1-3-201ENST00000365645 89 ntBASIC0.39□□□□□ -2.35
ZSWIM4Q9H7M6 MIR501-201ENST00000390204 84 ntBASIC0.39□□□□□ -2.35
ZSWIM4Q9H7M6 MIR760-201ENST00000390220 80 ntBASIC0.39□□□□□ -2.35
ZSWIM4Q9H7M6 Y_RNA.607-201ENST00000410597 98 ntBASIC0.39□□□□□ -2.35
ZSWIM4Q9H7M6 MIR7111-201ENST00000619751 72 ntBASIC0.39□□□□□ -2.35
ZSWIM4Q9H7M6 RNU6-652P-201ENST00000365488 107 ntBASIC0.38□□□□□ -2.35
ZSWIM4Q9H7M6 RNA5SP225-201ENST00000410874 135 ntBASIC0.38□□□□□ -2.35
ZSWIM4Q9H7M6 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.38□□□□□ -2.35
ZSWIM4Q9H7M6 AC069113.3-201ENST00000521019 150 ntBASIC0.38□□□□□ -2.35
ZSWIM4Q9H7M6 Y_RNA.788-201ENST00000622394 112 ntBASIC0.38□□□□□ -2.35
ZSWIM4Q9H7M6 Y_RNA.437-201ENST00000384113 113 ntBASIC0.37□□□□□ -2.35
ZSWIM4Q9H7M6 AC006210.1-201ENST00000424882 111 ntBASIC0.37□□□□□ -2.35
ZSWIM4Q9H7M6 RNU6-1057P-201ENST00000517162 102 ntBASIC0.37□□□□□ -2.35
ZSWIM4Q9H7M6 MIR4473-201ENST00000583731 91 ntBASIC0.37□□□□□ -2.35
ZSWIM4Q9H7M6 MIR4712-201ENST00000583750 82 ntBASIC0.37□□□□□ -2.35
ZSWIM4Q9H7M6 MIRLET7A1-201ENST00000362295 80 ntBASIC0.36□□□□□ -2.35
ZSWIM4Q9H7M6 RNU6-330P-201ENST00000363015 107 ntBASIC0.36□□□□□ -2.35
ZSWIM4Q9H7M6 SNORD114-23-201ENST00000363536 72 ntBASIC0.36□□□□□ -2.35
ZSWIM4Q9H7M6 Y_RNA.219-201ENST00000364232 113 ntBASIC0.36□□□□□ -2.35
ZSWIM4Q9H7M6 RNU6-382P-201ENST00000365181 106 ntBASIC0.36□□□□□ -2.35
ZSWIM4Q9H7M6 RNA5SP128-201ENST00000365305 116 ntBASIC0.36□□□□□ -2.35
ZSWIM4Q9H7M6 Y_RNA.426-201ENST00000384068 113 ntBASIC0.36□□□□□ -2.35
ZSWIM4Q9H7M6 RNU6-815P-201ENST00000384080 113 ntBASIC0.36□□□□□ -2.35
ZSWIM4Q9H7M6 RNU6-1124P-201ENST00000384169 107 ntBASIC0.36□□□□□ -2.35
ZSWIM4Q9H7M6 MIR1255A-201ENST00000408338 113 ntBASIC0.36□□□□□ -2.35
ZSWIM4Q9H7M6 YWHAEP2-201ENST00000580066 112 ntBASIC0.36□□□□□ -2.35
ZSWIM4Q9H7M6 AC069503.3-201ENST00000618674 145 ntBASIC0.36□□□□□ -2.35
ZSWIM4Q9H7M6 RNU6-495P-201ENST00000362995 107 ntBASIC0.35□□□□□ -2.35
ZSWIM4Q9H7M6 RNU6-1177P-201ENST00000391058 104 ntBASIC0.35□□□□□ -2.35
ZSWIM4Q9H7M6 SNORD110-201ENST00000408189 75 ntBASIC0.35□□□□□ -2.35
ZSWIM4Q9H7M6 AC097510.1-201ENST00000510945 133 ntBASIC0.35□□□□□ -2.35
ZSWIM4Q9H7M6 RNU6-557P-201ENST00000516842 110 ntBASIC0.35□□□□□ -2.35
ZSWIM4Q9H7M6 MIR4460-201ENST00000577862 86 ntBASIC0.35□□□□□ -2.35
ZSWIM4Q9H7M6 RN7SL793P-201ENST00000583259 296 ntBASIC0.35□□□□□ -2.35
ZSWIM4Q9H7M6 U6.81-201ENST00000612550 106 ntBASIC0.35□□□□□ -2.35
ZSWIM4Q9H7M6 MIR4315-1-201ENST00000636800 73 ntBASIC0.35□□□□□ -2.35
ZSWIM4Q9H7M6 MIR4315-2-201ENST00000640925 73 ntBASIC0.35□□□□□ -2.35
ZSWIM4Q9H7M6 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
ZSWIM4Q9H7M6 RNU6-208P-201ENST00000362431 107 ntBASIC0.34□□□□□ -2.36
ZSWIM4Q9H7M6 MIR582-201ENST00000365731 98 ntBASIC0.34□□□□□ -2.36
ZSWIM4Q9H7M6 MIR216B-201ENST00000390186 82 ntBASIC0.34□□□□□ -2.36
ZSWIM4Q9H7M6 U3.27-201ENST00000391237 200 ntBASIC0.34□□□□□ -2.36
ZSWIM4Q9H7M6 MIR548H2-201ENST00000408874 88 ntBASIC0.34□□□□□ -2.36
ZSWIM4Q9H7M6 MIR3925-201ENST00000584674 77 ntBASIC0.34□□□□□ -2.36
ZSWIM4Q9H7M6 SNORD115-37-201ENST00000363768 82 ntBASIC0.33□□□□□ -2.36
ZSWIM4Q9H7M6 RNU6-990P-201ENST00000364385 104 ntBASIC0.33□□□□□ -2.36
ZSWIM4Q9H7M6 RNU6-129P-201ENST00000391022 107 ntBASIC0.33□□□□□ -2.36
ZSWIM4Q9H7M6 SNORD77.2-201ENST00000391045 68 ntBASIC0.33□□□□□ -2.36
ZSWIM4Q9H7M6 RNU6-1275P-201ENST00000391087 107 ntBASIC0.33□□□□□ -2.36
ZSWIM4Q9H7M6 SCARNA18B-201ENST00000458806 135 ntBASIC0.33□□□□□ -2.36
ZSWIM4Q9H7M6 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.33□□□□□ -2.36
ZSWIM4Q9H7M6 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.33□□□□□ -2.36
ZSWIM4Q9H7M6 MIR499B-201ENST00000636498 73 ntBASIC0.33□□□□□ -2.36
ZSWIM4Q9H7M6 RNU6-340P-201ENST00000364005 107 ntBASIC0.32□□□□□ -2.36
ZSWIM4Q9H7M6 MIR652-201ENST00000385278 98 ntBASIC0.32□□□□□ -2.36
ZSWIM4Q9H7M6 SNORD78.1-201ENST00000390866 65 ntBASIC0.32□□□□□ -2.36
ZSWIM4Q9H7M6 MIR4677-201ENST00000584153 80 ntBASIC0.32□□□□□ -2.36
ZSWIM4Q9H7M6 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.32□□□□□ -2.36
ZSWIM4Q9H7M6 Y_RNA.125-201ENST00000363371 111 ntBASIC0.31□□□□□ -2.36
ZSWIM4Q9H7M6 Y_RNA.371-201ENST00000365591 113 ntBASIC0.31□□□□□ -2.36
ZSWIM4Q9H7M6 RNU6-242P-201ENST00000384359 107 ntBASIC0.31□□□□□ -2.36
ZSWIM4Q9H7M6 Y_RNA.606-201ENST00000410579 103 ntBASIC0.31□□□□□ -2.36
ZSWIM4Q9H7M6 AC074348.1-201ENST00000426503 132 ntBASIC0.31□□□□□ -2.36
ZSWIM4Q9H7M6 RNU7-129P-201ENST00000516128 62 ntBASIC0.31□□□□□ -2.36
ZSWIM4Q9H7M6 MIR548AD-201ENST00000584780 82 ntBASIC0.31□□□□□ -2.36
ZSWIM4Q9H7M6 MIR664A-201ENST00000626086 82 ntBASIC0.31□□□□□ -2.36
ZSWIM4Q9H7M6 AC010487.4-201ENST00000637027 61 ntBASIC0.31□□□□□ -2.36
ZSWIM4Q9H7M6 Y_RNA.12-201ENST00000362393 112 ntBASIC0.3□□□□□ -2.36
ZSWIM4Q9H7M6 RNU5F-1-201ENST00000362507 117 ntBASIC0.3□□□□□ -2.36
ZSWIM4Q9H7M6 RNU6-154P-201ENST00000384306 106 ntBASIC0.3□□□□□ -2.36
ZSWIM4Q9H7M6 RNU6-127P-201ENST00000390897 107 ntBASIC0.3□□□□□ -2.36
ZSWIM4Q9H7M6 SNORD75.2-201ENST00000408784 58 ntBASIC0.3□□□□□ -2.36
ZSWIM4Q9H7M6 SNORA72.7-201ENST00000516349 94 ntBASIC0.3□□□□□ -2.36
ZSWIM4Q9H7M6 RNU6-686P-201ENST00000364839 107 ntBASIC0.29□□□□□ -2.36
ZSWIM4Q9H7M6 Y_RNA.540-201ENST00000384638 111 ntBASIC0.29□□□□□ -2.36
ZSWIM4Q9H7M6 SNORA49-201ENST00000386157 136 ntBASIC0.29□□□□□ -2.36
ZSWIM4Q9H7M6 RNU7-24P-201ENST00000458867 62 ntBASIC0.29□□□□□ -2.36
ZSWIM4Q9H7M6 MIR4484-201ENST00000582855 83 ntBASIC0.29□□□□□ -2.36
ZSWIM4Q9H7M6 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
ZSWIM4Q9H7M6 MIR4773-1-201ENST00000637203 78 ntBASIC0.29□□□□□ -2.36
ZSWIM4Q9H7M6 RNU6-315P-201ENST00000362666 107 ntBASIC0.28□□□□□ -2.36
ZSWIM4Q9H7M6 MIR203A-201ENST00000384836 110 ntBASIC0.28□□□□□ -2.36
ZSWIM4Q9H7M6 MIR548E-201ENST00000408287 88 ntBASIC0.28□□□□□ -2.36
ZSWIM4Q9H7M6 RNU6-175P-201ENST00000516896 107 ntBASIC0.28□□□□□ -2.36
ZSWIM4Q9H7M6 Y_RNA.36-201ENST00000362602 112 ntBASIC0.27□□□□□ -2.37
ZSWIM4Q9H7M6 RNU6-279P-201ENST00000391297 101 ntBASIC0.27□□□□□ -2.37
ZSWIM4Q9H7M6 RNU6-857P-201ENST00000515893 110 ntBASIC0.27□□□□□ -2.37
ZSWIM4Q9H7M6 YWHAEP3-201ENST00000582767 121 ntBASIC0.27□□□□□ -2.37
ZSWIM4Q9H7M6 RN7SL660P-201ENST00000614852 299 ntBASIC0.27□□□□□ -2.37
ZSWIM4Q9H7M6 MIR3202-2-201ENST00000635980 79 ntBASIC0.27□□□□□ -2.37
ZSWIM4Q9H7M6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.26□□□□□ -2.37
ZSWIM4Q9H7M6 RNY4P3-201ENST00000365254 95 ntBASIC0.26□□□□□ -2.37
ZSWIM4Q9H7M6 Y_RNA.407-201ENST00000383986 113 ntBASIC0.26□□□□□ -2.37
ZSWIM4Q9H7M6 RNU7-188P-201ENST00000517063 64 ntBASIC0.26□□□□□ -2.37
ZSWIM4Q9H7M6 RNU6-1039P-201ENST00000383931 107 ntBASIC0.25□□□□□ -2.37
ZSWIM4Q9H7M6 MIR516B1-201ENST00000385211 90 ntBASIC0.25□□□□□ -2.37
ZSWIM4Q9H7M6 MIR5093-201ENST00000583199 100 ntBASIC0.25□□□□□ -2.37
ZSWIM4Q9H7M6 AC145423.2-201ENST00000610631 239 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 234.1 ms