Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 RNU6-62P-201ENST00000516526 102 ntBASIC-0.53□□□□□ -2.49
RNF41Q9H4P4 RNU6-106P-201ENST00000384405 107 ntBASIC-0.54□□□□□ -2.5
RNF41Q9H4P4 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.54□□□□□ -2.5
RNF41Q9H4P4 SNORD2-201ENST00000459163 69 ntBASIC-0.54□□□□□ -2.5
RNF41Q9H4P4 SNORA18.5-201ENST00000516616 101 ntBASIC-0.54□□□□□ -2.5
RNF41Q9H4P4 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.54□□□□□ -2.5
RNF41Q9H4P4 RNA5SP66-201ENST00000517178 101 ntBASIC-0.54□□□□□ -2.5
RNF41Q9H4P4 MIR4802-201ENST00000581881 80 ntBASIC-0.54□□□□□ -2.5
RNF41Q9H4P4 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.54□□□□□ -2.5
RNF41Q9H4P4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.55□□□□□ -2.5
RNF41Q9H4P4 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.55□□□□□ -2.5
RNF41Q9H4P4 SNORD56B-201ENST00000384713 71 ntBASIC-0.55□□□□□ -2.5
RNF41Q9H4P4 MIR196A2-201ENST00000385189 110 ntBASIC-0.55□□□□□ -2.5
RNF41Q9H4P4 RNU6-554P-201ENST00000410466 106 ntBASIC-0.55□□□□□ -2.5
RNF41Q9H4P4 TMSB4XP3-201ENST00000445144 114 ntBASIC-0.55□□□□□ -2.5
RNF41Q9H4P4 MIR4280-201ENST00000582178 76 ntBASIC-0.55□□□□□ -2.5
RNF41Q9H4P4 MIR101-1-201ENST00000362265 75 ntBASIC-0.56□□□□□ -2.5
RNF41Q9H4P4 RNU6-502P-201ENST00000362419 108 ntBASIC-0.56□□□□□ -2.5
RNF41Q9H4P4 RNU6-1168P-201ENST00000390831 104 ntBASIC-0.56□□□□□ -2.5
RNF41Q9H4P4 MIR1302-5-201ENST00000408164 150 ntBASIC-0.56□□□□□ -2.5
RNF41Q9H4P4 MIR548M-201ENST00000408260 86 ntBASIC-0.56□□□□□ -2.5
RNF41Q9H4P4 RNA5SP451-201ENST00000410588 110 ntBASIC-0.56□□□□□ -2.5
RNF41Q9H4P4 RNU7-24P-201ENST00000458867 62 ntBASIC-0.56□□□□□ -2.5
RNF41Q9H4P4 AC026421.1-201ENST00000519101 163 ntBASIC-0.56□□□□□ -2.5
RNF41Q9H4P4 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.57□□□□□ -2.5
RNF41Q9H4P4 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.57□□□□□ -2.5
RNF41Q9H4P4 RNU6-589P-201ENST00000516485 107 ntBASIC-0.57□□□□□ -2.5
RNF41Q9H4P4 MIR6129-201ENST00000616087 109 ntBASIC-0.57□□□□□ -2.5
RNF41Q9H4P4 uc_338.36-201ENST00000622331 158 ntBASIC-0.57□□□□□ -2.5
RNF41Q9H4P4 RNU6-22P-201ENST00000384355 107 ntBASIC-0.58□□□□□ -2.5
RNF41Q9H4P4 SNORA19-201ENST00000384737 128 ntBASIC-0.58□□□□□ -2.5
RNF41Q9H4P4 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.58□□□□□ -2.5
RNF41Q9H4P4 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.58□□□□□ -2.5
RNF41Q9H4P4 MIR4493-201ENST00000584016 73 ntBASIC-0.58□□□□□ -2.5
RNF41Q9H4P4 RNU6-834P-201ENST00000362367 110 ntBASIC-0.59□□□□□ -2.5
RNF41Q9H4P4 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.59□□□□□ -2.5
RNF41Q9H4P4 SNORD75.1-201ENST00000408373 60 ntBASIC-0.59□□□□□ -2.5
RNF41Q9H4P4 snoU13.13-201ENST00000458842 104 ntBASIC-0.59□□□□□ -2.5
RNF41Q9H4P4 RNU7-61P-201ENST00000515897 61 ntBASIC-0.59□□□□□ -2.5
RNF41Q9H4P4 RNU6-109P-201ENST00000516364 107 ntBASIC-0.59□□□□□ -2.5
RNF41Q9H4P4 RNU6-184P-201ENST00000516514 107 ntBASIC-0.59□□□□□ -2.5
RNF41Q9H4P4 SNORA40.17-201ENST00000517256 115 ntBASIC-0.59□□□□□ -2.5
RNF41Q9H4P4 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.6□□□□□ -2.51
RNF41Q9H4P4 SNORD116-10-201ENST00000363791 102 ntBASIC-0.6□□□□□ -2.51
RNF41Q9H4P4 MIR604-201ENST00000384880 94 ntBASIC-0.6□□□□□ -2.51
RNF41Q9H4P4 SNORD75.2-201ENST00000408784 58 ntBASIC-0.6□□□□□ -2.51
RNF41Q9H4P4 RPS29P8-201ENST00000445109 171 ntBASIC-0.6□□□□□ -2.51
RNF41Q9H4P4 MIR4432-201ENST00000581823 84 ntBASIC-0.6□□□□□ -2.51
RNF41Q9H4P4 MIR4636-201ENST00000582271 80 ntBASIC-0.6□□□□□ -2.51
RNF41Q9H4P4 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.61□□□□□ -2.51
RNF41Q9H4P4 RNA5SP368-201ENST00000364298 116 ntBASIC-0.61□□□□□ -2.51
RNF41Q9H4P4 snoU13.17-201ENST00000458802 104 ntBASIC-0.61□□□□□ -2.51
RNF41Q9H4P4 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.61□□□□□ -2.51
RNF41Q9H4P4 RNU4-32P-201ENST00000363404 141 ntBASIC-0.62□□□□□ -2.51
RNF41Q9H4P4 RNU6-990P-201ENST00000364385 104 ntBASIC-0.62□□□□□ -2.51
RNF41Q9H4P4 RNY4P3-201ENST00000365254 95 ntBASIC-0.62□□□□□ -2.51
RNF41Q9H4P4 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.62□□□□□ -2.51
RNF41Q9H4P4 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.62□□□□□ -2.51
RNF41Q9H4P4 RNU6-337P-201ENST00000391243 106 ntBASIC-0.62□□□□□ -2.51
RNF41Q9H4P4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.62□□□□□ -2.51
RNF41Q9H4P4 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.62□□□□□ -2.51
RNF41Q9H4P4 MTATP6P29-201ENST00000415057 132 ntBASIC-0.62□□□□□ -2.51
RNF41Q9H4P4 RNU6-758P-201ENST00000516292 89 ntBASIC-0.62□□□□□ -2.51
RNF41Q9H4P4 RNA5SP169-201ENST00000517268 117 ntBASIC-0.62□□□□□ -2.51
RNF41Q9H4P4 AC093726.3-201ENST00000637588 150 ntBASIC-0.62□□□□□ -2.51
RNF41Q9H4P4 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.63□□□□□ -2.51
RNF41Q9H4P4 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.63□□□□□ -2.51
RNF41Q9H4P4 RNU6-973P-201ENST00000364690 107 ntBASIC-0.63□□□□□ -2.51
RNF41Q9H4P4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.63□□□□□ -2.51
RNF41Q9H4P4 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.63□□□□□ -2.51
RNF41Q9H4P4 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.63□□□□□ -2.51
RNF41Q9H4P4 AC114755.3-201ENST00000481111 251 ntBASIC-0.63□□□□□ -2.51
RNF41Q9H4P4 SNORA63.6-201ENST00000364921 119 ntBASIC-0.64□□□□□ -2.51
RNF41Q9H4P4 RNU6-382P-201ENST00000365181 106 ntBASIC-0.64□□□□□ -2.51
RNF41Q9H4P4 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.64□□□□□ -2.51
RNF41Q9H4P4 MIR224-201ENST00000384889 81 ntBASIC-0.64□□□□□ -2.51
RNF41Q9H4P4 Z95118.1-201ENST00000421372 247 ntBASIC-0.64□□□□□ -2.51
RNF41Q9H4P4 AL445193.1-201ENST00000441183 141 ntBASIC-0.64□□□□□ -2.51
RNF41Q9H4P4 RNU6-479P-201ENST00000516348 105 ntBASIC-0.64□□□□□ -2.51
RNF41Q9H4P4 MIR3910-1-201ENST00000580936 111 ntBASIC-0.64□□□□□ -2.51
RNF41Q9H4P4 MIR6773-201ENST00000612812 74 ntBASIC-0.64□□□□□ -2.51
RNF41Q9H4P4 MIR6851-201ENST00000617060 67 ntBASIC-0.64□□□□□ -2.51
RNF41Q9H4P4 RNU6-824P-201ENST00000363724 104 ntBASIC-0.65□□□□□ -2.51
RNF41Q9H4P4 RNU6-901P-201ENST00000384593 106 ntBASIC-0.65□□□□□ -2.51
RNF41Q9H4P4 U7.3-201ENST00000616123 62 ntBASIC-0.65□□□□□ -2.51
RNF41Q9H4P4 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.65□□□□□ -2.51
RNF41Q9H4P4 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.66□□□□□ -2.52
RNF41Q9H4P4 MIR1265-201ENST00000408444 86 ntBASIC-0.66□□□□□ -2.52
RNF41Q9H4P4 RNU6-162P-201ENST00000516228 103 ntBASIC-0.66□□□□□ -2.52
RNF41Q9H4P4 SNORD38.3-201ENST00000516599 73 ntBASIC-0.66□□□□□ -2.52
RNF41Q9H4P4 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.66□□□□□ -2.52
RNF41Q9H4P4 AL391099.1-201ENST00000624635 187 ntBASIC-0.66□□□□□ -2.52
RNF41Q9H4P4 RNU6-766P-201ENST00000362478 107 ntBASIC-0.67□□□□□ -2.52
RNF41Q9H4P4 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.67□□□□□ -2.52
RNF41Q9H4P4 SNORD113-1-201ENST00000365321 69 ntBASIC-0.67□□□□□ -2.52
RNF41Q9H4P4 RNU6-1154P-201ENST00000391001 104 ntBASIC-0.67□□□□□ -2.52
RNF41Q9H4P4 AC006254.2-201ENST00000603259 279 ntBASIC-0.67□□□□□ -2.52
RNF41Q9H4P4 AC108676.2-201ENST00000605225 163 ntBASIC-0.67□□□□□ -2.52
RNF41Q9H4P4 AC132825.6-201ENST00000638861 357 ntBASIC-0.67□□□□□ -2.52
RNF41Q9H4P4 MIRLET7B-201ENST00000385140 83 ntBASIC-0.68□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 310 ms