Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.1□□□□□ -2.75
UPF3BQ9BZI7 RNU6-608P-201ENST00000383927 104 ntBASIC-2.1□□□□□ -2.75
UPF3BQ9BZI7 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.1□□□□□ -2.75
UPF3BQ9BZI7 RNU6-1009P-201ENST00000390996 107 ntBASIC-2.1□□□□□ -2.75
UPF3BQ9BZI7 RNU7-24P-201ENST00000458867 62 ntBASIC-2.1□□□□□ -2.75
UPF3BQ9BZI7 RNU6-65P-201ENST00000516332 98 ntBASIC-2.1□□□□□ -2.75
UPF3BQ9BZI7 MIR3140-201ENST00000583685 90 ntBASIC-2.1□□□□□ -2.75
UPF3BQ9BZI7 MIR6844-201ENST00000637122 62 ntBASIC-2.1□□□□□ -2.75
UPF3BQ9BZI7 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.11□□□□□ -2.75
UPF3BQ9BZI7 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.11□□□□□ -2.75
UPF3BQ9BZI7 MIR4536-1-201ENST00000583537 88 ntBASIC-2.11□□□□□ -2.75
UPF3BQ9BZI7 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-2.11□□□□□ -2.75
UPF3BQ9BZI7 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.11□□□□□ -2.75
UPF3BQ9BZI7 SNORD115-31-201ENST00000365318 82 ntBASIC-2.12□□□□□ -2.75
UPF3BQ9BZI7 MIR203A-201ENST00000384836 110 ntBASIC-2.12□□□□□ -2.75
UPF3BQ9BZI7 SNORA19.1-201ENST00000410656 129 ntBASIC-2.12□□□□□ -2.75
UPF3BQ9BZI7 snoU13.17-201ENST00000458802 104 ntBASIC-2.12□□□□□ -2.75
UPF3BQ9BZI7 Y_RNA.686-201ENST00000516548 134 ntBASIC-2.12□□□□□ -2.75
UPF3BQ9BZI7 MIR3646-201ENST00000578301 84 ntBASIC-2.12□□□□□ -2.75
UPF3BQ9BZI7 Y_RNA.337-201ENST00000365312 102 ntBASIC-2.13□□□□□ -2.75
UPF3BQ9BZI7 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.13□□□□□ -2.75
UPF3BQ9BZI7 MIR520D-201ENST00000385002 87 ntBASIC-2.13□□□□□ -2.75
UPF3BQ9BZI7 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.13□□□□□ -2.75
UPF3BQ9BZI7 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.14□□□□□ -2.75
UPF3BQ9BZI7 RNY4P28-201ENST00000365281 93 ntBASIC-2.14□□□□□ -2.75
UPF3BQ9BZI7 RNU6-841P-201ENST00000383872 107 ntBASIC-2.14□□□□□ -2.75
UPF3BQ9BZI7 SNORA24B-201ENST00000384176 131 ntBASIC-2.14□□□□□ -2.75
UPF3BQ9BZI7 MIR548A1-201ENST00000385041 97 ntBASIC-2.14□□□□□ -2.75
UPF3BQ9BZI7 MIR759-201ENST00000390224 91 ntBASIC-2.14□□□□□ -2.75
UPF3BQ9BZI7 AL442128.1-201ENST00000615151 90 ntBASIC-2.14□□□□□ -2.75
UPF3BQ9BZI7 Y_RNA.213-201ENST00000364178 111 ntBASIC-2.15□□□□□ -2.75
UPF3BQ9BZI7 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.15□□□□□ -2.75
UPF3BQ9BZI7 RNU6-132P-201ENST00000383863 107 ntBASIC-2.15□□□□□ -2.75
UPF3BQ9BZI7 RNU6-258P-201ENST00000390884 101 ntBASIC-2.15□□□□□ -2.75
UPF3BQ9BZI7 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.15□□□□□ -2.75
UPF3BQ9BZI7 RNY4-201ENST00000516507 96 ntBASIC-2.15□□□□□ -2.75
UPF3BQ9BZI7 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.16□□□□□ -2.76
UPF3BQ9BZI7 Y_RNA.198-201ENST00000364013 98 ntBASIC-2.16□□□□□ -2.76
UPF3BQ9BZI7 SNORD50.2-201ENST00000365465 70 ntBASIC-2.16□□□□□ -2.76
UPF3BQ9BZI7 Y_RNA.401-201ENST00000383965 117 ntBASIC-2.16□□□□□ -2.76
UPF3BQ9BZI7 RNU6-409P-201ENST00000384114 104 ntBASIC-2.16□□□□□ -2.76
UPF3BQ9BZI7 RNU6-988P-201ENST00000519081 107 ntBASIC-2.16□□□□□ -2.76
UPF3BQ9BZI7 AC120024.2-201ENST00000576526 175 ntBASIC-2.16□□□□□ -2.76
UPF3BQ9BZI7 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.17□□□□□ -2.76
UPF3BQ9BZI7 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.17□□□□□ -2.76
UPF3BQ9BZI7 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.17□□□□□ -2.76
UPF3BQ9BZI7 MIR548D2-201ENST00000384955 97 ntBASIC-2.17□□□□□ -2.76
UPF3BQ9BZI7 RNU5E-3P-201ENST00000515913 68 ntBASIC-2.17□□□□□ -2.76
UPF3BQ9BZI7 RNU6-518P-201ENST00000516056 96 ntBASIC-2.17□□□□□ -2.76
UPF3BQ9BZI7 AC025521.1-201ENST00000621624 286 ntBASIC-2.17□□□□□ -2.76
UPF3BQ9BZI7 Y_RNA.356-201ENST00000365475 113 ntBASIC-2.18□□□□□ -2.76
UPF3BQ9BZI7 RNU7-85P-201ENST00000458851 63 ntBASIC-2.18□□□□□ -2.76
UPF3BQ9BZI7 RNU6-766P-201ENST00000362478 107 ntBASIC-2.19□□□□□ -2.76
UPF3BQ9BZI7 RNU6-630P-201ENST00000391258 106 ntBASIC-2.19□□□□□ -2.76
UPF3BQ9BZI7 U6atac.1-201ENST00000616025 117 ntBASIC-2.19□□□□□ -2.76
UPF3BQ9BZI7 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.19□□□□□ -2.76
UPF3BQ9BZI7 Y_RNA.155-201ENST00000363632 101 ntBASIC-2.2□□□□□ -2.76
UPF3BQ9BZI7 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.2□□□□□ -2.76
UPF3BQ9BZI7 RNY3P14-201ENST00000384309 102 ntBASIC-2.2□□□□□ -2.76
UPF3BQ9BZI7 SNORD54-201ENST00000459159 67 ntBASIC-2.2□□□□□ -2.76
UPF3BQ9BZI7 RNU6-1271P-201ENST00000517049 105 ntBASIC-2.2□□□□□ -2.76
UPF3BQ9BZI7 RNA5SP93-201ENST00000362525 114 ntBASIC-2.21□□□□□ -2.76
UPF3BQ9BZI7 RNU6-478P-201ENST00000363904 110 ntBASIC-2.21□□□□□ -2.76
UPF3BQ9BZI7 Y_RNA.421-201ENST00000384052 101 ntBASIC-2.21□□□□□ -2.76
UPF3BQ9BZI7 MT-TW-201ENST00000387382 68 ntBASIC-2.21□□□□□ -2.76
UPF3BQ9BZI7 SNORD90-201ENST00000391145 111 ntBASIC-2.21□□□□□ -2.76
UPF3BQ9BZI7 RNU7-154P-201ENST00000516194 62 ntBASIC-2.21□□□□□ -2.76
UPF3BQ9BZI7 Y_RNA.507-201ENST00000384500 99 ntBASIC-2.22□□□□□ -2.76
UPF3BQ9BZI7 MIR548U-201ENST00000390728 81 ntBASIC-2.22□□□□□ -2.76
UPF3BQ9BZI7 snoU13.10-201ENST00000459301 103 ntBASIC-2.22□□□□□ -2.76
UPF3BQ9BZI7 RNU6-875P-201ENST00000516488 106 ntBASIC-2.22□□□□□ -2.76
UPF3BQ9BZI7 MIR548W-201ENST00000581970 74 ntBASIC-2.22□□□□□ -2.76
UPF3BQ9BZI7 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.23□□□□□ -2.77
UPF3BQ9BZI7 RNU6-260P-201ENST00000384092 107 ntBASIC-2.23□□□□□ -2.77
UPF3BQ9BZI7 MIR4680-201ENST00000580906 66 ntBASIC-2.23□□□□□ -2.77
UPF3BQ9BZI7 MIR3064-201ENST00000581130 66 ntBASIC-2.23□□□□□ -2.77
UPF3BQ9BZI7 RNU6-474P-201ENST00000384243 107 ntBASIC-2.24□□□□□ -2.77
UPF3BQ9BZI7 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.24□□□□□ -2.77
UPF3BQ9BZI7 RNU6-382P-201ENST00000365181 106 ntBASIC-2.25□□□□□ -2.77
UPF3BQ9BZI7 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.25□□□□□ -2.77
UPF3BQ9BZI7 SNORD127-201ENST00000458892 86 ntBASIC-2.25□□□□□ -2.77
UPF3BQ9BZI7 MIR4795-201ENST00000584182 89 ntBASIC-2.25□□□□□ -2.77
UPF3BQ9BZI7 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.26□□□□□ -2.77
UPF3BQ9BZI7 RNU6-1051P-201ENST00000365471 102 ntBASIC-2.26□□□□□ -2.77
UPF3BQ9BZI7 Y_RNA.483-201ENST00000384380 101 ntBASIC-2.26□□□□□ -2.77
UPF3BQ9BZI7 RNU6-713P-201ENST00000384761 107 ntBASIC-2.26□□□□□ -2.77
UPF3BQ9BZI7 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.26□□□□□ -2.77
UPF3BQ9BZI7 MIR548P-201ENST00000408336 84 ntBASIC-2.26□□□□□ -2.77
UPF3BQ9BZI7 RNA5SP136-201ENST00000410906 107 ntBASIC-2.26□□□□□ -2.77
UPF3BQ9BZI7 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.26□□□□□ -2.77
UPF3BQ9BZI7 MIR3121-201ENST00000579680 77 ntBASIC-2.26□□□□□ -2.77
UPF3BQ9BZI7 AC104996.3-201ENST00000590718 94 ntBASIC-2.26□□□□□ -2.77
UPF3BQ9BZI7 AC006254.2-201ENST00000603259 279 ntBASIC-2.26□□□□□ -2.77
UPF3BQ9BZI7 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.27□□□□□ -2.77
UPF3BQ9BZI7 AL513043.2-201ENST00000573941 143 ntBASIC-2.27□□□□□ -2.77
UPF3BQ9BZI7 MIR3657-201ENST00000584818 117 ntBASIC-2.27□□□□□ -2.77
UPF3BQ9BZI7 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.27□□□□□ -2.77
UPF3BQ9BZI7 SNORD37.2-201ENST00000391075 66 ntBASIC-2.28□□□□□ -2.77
UPF3BQ9BZI7 MIR1302-6-201ENST00000408466 90 ntBASIC-2.28□□□□□ -2.77
UPF3BQ9BZI7 U6.104-201ENST00000637979 90 ntBASIC-2.28□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 1076.9 ms