Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.77□□□□□ -2.13
COL25A1Q9BXS0 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
COL25A1Q9BXS0 RNU1-141P-201ENST00000364623 158 ntBASIC1.76□□□□□ -2.13
COL25A1Q9BXS0 SNORA33.1-201ENST00000364957 130 ntBASIC1.76□□□□□ -2.13
COL25A1Q9BXS0 SNORA15B-2-201ENST00000384058 135 ntBASIC1.76□□□□□ -2.13
COL25A1Q9BXS0 SNORA15B-1-201ENST00000384334 135 ntBASIC1.76□□□□□ -2.13
COL25A1Q9BXS0 MIR4287-201ENST00000579398 78 ntBASIC1.76□□□□□ -2.13
COL25A1Q9BXS0 Y_RNA.125-201ENST00000363371 111 ntBASIC1.75□□□□□ -2.13
COL25A1Q9BXS0 SNORD114-27-201ENST00000363766 70 ntBASIC1.75□□□□□ -2.13
COL25A1Q9BXS0 MIR644A-201ENST00000385262 94 ntBASIC1.75□□□□□ -2.13
COL25A1Q9BXS0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.75□□□□□ -2.13
COL25A1Q9BXS0 AC104435.1-201ENST00000483483 166 ntBASIC1.75□□□□□ -2.13
COL25A1Q9BXS0 MIR5002-201ENST00000584713 97 ntBASIC1.75□□□□□ -2.13
COL25A1Q9BXS0 MIR4639-201ENST00000584938 69 ntBASIC1.75□□□□□ -2.13
COL25A1Q9BXS0 AC244669.1-204ENST00000621564 178 ntBASIC1.75□□□□□ -2.13
COL25A1Q9BXS0 Y_RNA.246-201ENST00000364495 108 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 Y_RNA.325-201ENST00000365171 122 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 SNORA80D-201ENST00000384488 135 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 SNORD28-201ENST00000384706 75 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 MIR30A-201ENST00000385092 71 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 MIR676-201ENST00000390702 67 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 RNU7-90P-201ENST00000459216 62 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 RNU5B-6P-201ENST00000516765 68 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 RNU6-135P-201ENST00000516769 101 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 RNU1-40P-201ENST00000516816 164 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 RN7SKP88-201ENST00000516847 250 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 RNU1-97P-201ENST00000516872 164 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 MIR1273G-201ENST00000577677 100 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 MIR4299-201ENST00000577899 72 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 7SK.8-201ENST00000612110 250 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 7SK.11-201ENST00000615477 250 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 7SK.13-201ENST00000622040 250 ntBASIC1.74□□□□□ -2.13
COL25A1Q9BXS0 MIR193B-201ENST00000384907 83 ntBASIC1.73□□□□□ -2.13
COL25A1Q9BXS0 SNORA67.6-201ENST00000391093 99 ntBASIC1.73□□□□□ -2.13
COL25A1Q9BXS0 MIR1827-201ENST00000408549 66 ntBASIC1.73□□□□□ -2.13
COL25A1Q9BXS0 AC002350.1-201ENST00000490759 375 ntBASIC1.73□□□□□ -2.13
COL25A1Q9BXS0 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL25A1Q9BXS0 RNA5SP257-201ENST00000363023 116 ntBASIC1.72□□□□□ -2.13
COL25A1Q9BXS0 RNU6-726P-201ENST00000364680 107 ntBASIC1.72□□□□□ -2.13
COL25A1Q9BXS0 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
COL25A1Q9BXS0 SNORD79.1-201ENST00000516069 84 ntBASIC1.71□□□□□ -2.14
COL25A1Q9BXS0 RNA5SP121-201ENST00000516537 101 ntBASIC1.71□□□□□ -2.14
COL25A1Q9BXS0 RNA5SP364-201ENST00000516938 78 ntBASIC1.71□□□□□ -2.14
COL25A1Q9BXS0 SNORA40.16-201ENST00000517238 121 ntBASIC1.71□□□□□ -2.14
COL25A1Q9BXS0 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.71□□□□□ -2.14
COL25A1Q9BXS0 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL25A1Q9BXS0 RNA5SP363-201ENST00000365072 115 ntBASIC1.7□□□□□ -2.14
COL25A1Q9BXS0 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
COL25A1Q9BXS0 RNU6-910P-201ENST00000390844 107 ntBASIC1.7□□□□□ -2.14
COL25A1Q9BXS0 MIR548L-201ENST00000408303 86 ntBASIC1.7□□□□□ -2.14
COL25A1Q9BXS0 SNORA44.1-201ENST00000517031 108 ntBASIC1.7□□□□□ -2.14
COL25A1Q9BXS0 MIR6086-201ENST00000638065 55 ntBASIC1.7□□□□□ -2.14
COL25A1Q9BXS0 MIR758-201ENST00000390227 88 ntBASIC1.69□□□□□ -2.14
COL25A1Q9BXS0 RNU6-1246P-201ENST00000391064 107 ntBASIC1.69□□□□□ -2.14
COL25A1Q9BXS0 HMGN2P19-201ENST00000425149 265 ntBASIC1.69□□□□□ -2.14
COL25A1Q9BXS0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.69□□□□□ -2.14
COL25A1Q9BXS0 MIR548X-201ENST00000580069 75 ntBASIC1.69□□□□□ -2.14
COL25A1Q9BXS0 MIR4448-201ENST00000584360 86 ntBASIC1.69□□□□□ -2.14
COL25A1Q9BXS0 AP000553.5-201ENST00000641933 54 ntBASIC1.69□□□□□ -2.14
COL25A1Q9BXS0 SNORA9.1-201ENST00000362412 131 ntBASIC1.68□□□□□ -2.14
COL25A1Q9BXS0 SNORA8.2-201ENST00000384372 139 ntBASIC1.68□□□□□ -2.14
COL25A1Q9BXS0 RNU6-269P-201ENST00000391077 97 ntBASIC1.68□□□□□ -2.14
COL25A1Q9BXS0 SNORD116.2-201ENST00000391251 93 ntBASIC1.68□□□□□ -2.14
COL25A1Q9BXS0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.68□□□□□ -2.14
COL25A1Q9BXS0 uc_338.20-201ENST00000621563 178 ntBASIC1.68□□□□□ -2.14
COL25A1Q9BXS0 SNORA63.6-201ENST00000364921 119 ntBASIC1.67□□□□□ -2.14
COL25A1Q9BXS0 MIR517C-201ENST00000385103 95 ntBASIC1.67□□□□□ -2.14
COL25A1Q9BXS0 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
COL25A1Q9BXS0 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.67□□□□□ -2.14
COL25A1Q9BXS0 RNA5SP47-201ENST00000517230 109 ntBASIC1.67□□□□□ -2.14
COL25A1Q9BXS0 MIR6767-201ENST00000637302 66 ntBASIC1.67□□□□□ -2.14
COL25A1Q9BXS0 SNORD116-16-201ENST00000384533 92 ntBASIC1.66□□□□□ -2.14
COL25A1Q9BXS0 RNA5SP484-201ENST00000458857 111 ntBASIC1.66□□□□□ -2.14
COL25A1Q9BXS0 RNU6-717P-201ENST00000459076 104 ntBASIC1.66□□□□□ -2.14
COL25A1Q9BXS0 SCARNA17.3-201ENST00000516381 125 ntBASIC1.66□□□□□ -2.14
COL25A1Q9BXS0 SNORD18A-201ENST00000363753 72 ntBASIC1.65□□□□□ -2.15
COL25A1Q9BXS0 SNORA25.8-201ENST00000364831 128 ntBASIC1.65□□□□□ -2.15
COL25A1Q9BXS0 RNU6-716P-201ENST00000365621 103 ntBASIC1.65□□□□□ -2.15
COL25A1Q9BXS0 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.65□□□□□ -2.15
COL25A1Q9BXS0 RNU6-469P-201ENST00000516253 101 ntBASIC1.65□□□□□ -2.15
COL25A1Q9BXS0 MIR5000-201ENST00000577717 103 ntBASIC1.65□□□□□ -2.15
COL25A1Q9BXS0 AL590095.2-201ENST00000604136 117 ntBASIC1.65□□□□□ -2.15
COL25A1Q9BXS0 MIR7110-201ENST00000612638 86 ntBASIC1.65□□□□□ -2.15
COL25A1Q9BXS0 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.15
COL25A1Q9BXS0 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
COL25A1Q9BXS0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
COL25A1Q9BXS0 RNU1-78P-201ENST00000391248 165 ntBASIC1.64□□□□□ -2.15
COL25A1Q9BXS0 Y_RNA.74-201ENST00000362911 99 ntBASIC1.63□□□□□ -2.15
COL25A1Q9BXS0 RNU6-838P-201ENST00000363399 108 ntBASIC1.63□□□□□ -2.15
COL25A1Q9BXS0 MIR582-201ENST00000365731 98 ntBASIC1.63□□□□□ -2.15
COL25A1Q9BXS0 MIR545-201ENST00000385085 106 ntBASIC1.63□□□□□ -2.15
COL25A1Q9BXS0 MIR652-201ENST00000385278 98 ntBASIC1.63□□□□□ -2.15
COL25A1Q9BXS0 MIR3198-2-201ENST00000577868 80 ntBASIC1.63□□□□□ -2.15
COL25A1Q9BXS0 MIR1323-201ENST00000408090 73 ntBASIC1.62□□□□□ -2.15
COL25A1Q9BXS0 MIR548E-201ENST00000408287 88 ntBASIC1.62□□□□□ -2.15
COL25A1Q9BXS0 RNA5SP330-201ENST00000517096 96 ntBASIC1.62□□□□□ -2.15
COL25A1Q9BXS0 SNORA31.24-201ENST00000517232 57 ntBASIC1.62□□□□□ -2.15
COL25A1Q9BXS0 CYP3A54P-201ENST00000566950 75 ntBASIC1.62□□□□□ -2.15
COL25A1Q9BXS0 Y_RNA.407-201ENST00000383986 113 ntBASIC1.61□□□□□ -2.15
COL25A1Q9BXS0 SNORA40B-201ENST00000385573 128 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 318 ms