Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 RNU6-154P-201ENST00000384306 106 ntBASIC0.07□□□□□ -2.4
PAAF1Q9BRP4 SNORD116-22-201ENST00000384430 92 ntBASIC0.07□□□□□ -2.4
PAAF1Q9BRP4 MIR3140-201ENST00000583685 90 ntBASIC0.07□□□□□ -2.4
PAAF1Q9BRP4 Y_RNA.437-201ENST00000384113 113 ntBASIC0.06□□□□□ -2.4
PAAF1Q9BRP4 RNU6-762P-201ENST00000517107 102 ntBASIC0.06□□□□□ -2.4
PAAF1Q9BRP4 MIR4796-201ENST00000580742 81 ntBASIC0.06□□□□□ -2.4
PAAF1Q9BRP4 MIR145-201ENST00000384967 88 ntBASIC0.05□□□□□ -2.4
PAAF1Q9BRP4 MIR519C-201ENST00000385053 87 ntBASIC0.05□□□□□ -2.4
PAAF1Q9BRP4 RNA5SP163-201ENST00000410304 99 ntBASIC0.05□□□□□ -2.4
PAAF1Q9BRP4 MIR4667-201ENST00000578933 66 ntBASIC0.05□□□□□ -2.4
PAAF1Q9BRP4 MIR4668-201ENST00000582284 70 ntBASIC0.05□□□□□ -2.4
PAAF1Q9BRP4 MIR548AE1-201ENST00000583292 70 ntBASIC0.05□□□□□ -2.4
PAAF1Q9BRP4 MIR4768-201ENST00000585270 74 ntBASIC0.05□□□□□ -2.4
PAAF1Q9BRP4 MIR371B-201ENST00000638082 66 ntBASIC0.05□□□□□ -2.4
PAAF1Q9BRP4 RNU5F-1-201ENST00000362507 117 ntBASIC0.04□□□□□ -2.4
PAAF1Q9BRP4 SNORD114-29-201ENST00000364819 70 ntBASIC0.04□□□□□ -2.4
PAAF1Q9BRP4 RNU6-54P-201ENST00000365563 107 ntBASIC0.04□□□□□ -2.4
PAAF1Q9BRP4 MIR488-201ENST00000365739 83 ntBASIC0.04□□□□□ -2.4
PAAF1Q9BRP4 RNU7-188P-201ENST00000517063 64 ntBASIC0.04□□□□□ -2.4
PAAF1Q9BRP4 SNORD115-37-201ENST00000363768 82 ntBASIC0.03□□□□□ -2.4
PAAF1Q9BRP4 SNORD114-4-201ENST00000363962 75 ntBASIC0.03□□□□□ -2.4
PAAF1Q9BRP4 MIR4743-201ENST00000584576 69 ntBASIC0.03□□□□□ -2.4
PAAF1Q9BRP4 Y_RNA.558-201ENST00000384685 113 ntBASIC0.02□□□□□ -2.41
PAAF1Q9BRP4 RNY4P30-201ENST00000410216 95 ntBASIC0.02□□□□□ -2.41
PAAF1Q9BRP4 RNU7-159P-201ENST00000459284 62 ntBASIC0.02□□□□□ -2.41
PAAF1Q9BRP4 MIR6514-201ENST00000622549 70 ntBASIC0.02□□□□□ -2.41
PAAF1Q9BRP4 RNY1P7-201ENST00000384743 110 ntBASIC0.01□□□□□ -2.41
PAAF1Q9BRP4 MIR652-201ENST00000385278 98 ntBASIC0.01□□□□□ -2.41
PAAF1Q9BRP4 RNU6-1177P-201ENST00000391058 104 ntBASIC0.01□□□□□ -2.41
PAAF1Q9BRP4 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.01□□□□□ -2.41
PAAF1Q9BRP4 RNU6-1134P-201ENST00000365156 101 ntBASIC0□□□□□ -2.41
PAAF1Q9BRP4 MIR876-201ENST00000401147 81 ntBASIC0□□□□□ -2.41
PAAF1Q9BRP4 MIR548H2-201ENST00000408874 88 ntBASIC0□□□□□ -2.41
PAAF1Q9BRP4 MIR20A-201ENST00000362279 71 ntBASIC-0.01□□□□□ -2.41
PAAF1Q9BRP4 RNU6-633P-201ENST00000362612 103 ntBASIC-0.01□□□□□ -2.41
PAAF1Q9BRP4 SNORD115-27-201ENST00000364430 82 ntBASIC-0.01□□□□□ -2.41
PAAF1Q9BRP4 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.01□□□□□ -2.41
PAAF1Q9BRP4 SNORD90-201ENST00000391145 111 ntBASIC-0.01□□□□□ -2.41
PAAF1Q9BRP4 RNU7-153P-201ENST00000516455 62 ntBASIC-0.01□□□□□ -2.41
PAAF1Q9BRP4 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
PAAF1Q9BRP4 RNU6-402P-201ENST00000410678 103 ntBASIC-0.02□□□□□ -2.41
PAAF1Q9BRP4 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.02□□□□□ -2.41
PAAF1Q9BRP4 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.03□□□□□ -2.41
PAAF1Q9BRP4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.03□□□□□ -2.41
PAAF1Q9BRP4 Y_RNA.681-201ENST00000516445 113 ntBASIC-0.04□□□□□ -2.42
PAAF1Q9BRP4 RNU6-844P-201ENST00000517175 102 ntBASIC-0.04□□□□□ -2.42
PAAF1Q9BRP4 CR383656.4-201ENST00000546909 122 ntBASIC-0.04□□□□□ -2.42
PAAF1Q9BRP4 RN7SL660P-201ENST00000614852 299 ntBASIC-0.04□□□□□ -2.42
PAAF1Q9BRP4 RNU6-161P-201ENST00000363051 106 ntBASIC-0.05□□□□□ -2.42
PAAF1Q9BRP4 SNORA24B-201ENST00000384176 131 ntBASIC-0.05□□□□□ -2.42
PAAF1Q9BRP4 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
PAAF1Q9BRP4 AC244090.1-201ENST00000441884 93 ntBASIC-0.05□□□□□ -2.42
PAAF1Q9BRP4 SNORD42B-201ENST00000458893 67 ntBASIC-0.05□□□□□ -2.42
PAAF1Q9BRP4 RNU6-180P-201ENST00000516697 61 ntBASIC-0.05□□□□□ -2.42
PAAF1Q9BRP4 MIR4290-201ENST00000583807 95 ntBASIC-0.05□□□□□ -2.42
PAAF1Q9BRP4 RNU6-929P-201ENST00000384429 107 ntBASIC-0.06□□□□□ -2.42
PAAF1Q9BRP4 AL450471.1-201ENST00000447509 127 ntBASIC-0.06□□□□□ -2.42
PAAF1Q9BRP4 RNU7-165P-201ENST00000458864 60 ntBASIC-0.06□□□□□ -2.42
PAAF1Q9BRP4 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.06□□□□□ -2.42
PAAF1Q9BRP4 AC006254.2-201ENST00000603259 279 ntBASIC-0.06□□□□□ -2.42
PAAF1Q9BRP4 RNU6-495P-201ENST00000362995 107 ntBASIC-0.07□□□□□ -2.42
PAAF1Q9BRP4 MIR106A-201ENST00000384870 81 ntBASIC-0.07□□□□□ -2.42
PAAF1Q9BRP4 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
PAAF1Q9BRP4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
PAAF1Q9BRP4 AC097510.1-201ENST00000510945 133 ntBASIC-0.07□□□□□ -2.42
PAAF1Q9BRP4 AC093729.1-201ENST00000513074 128 ntBASIC-0.07□□□□□ -2.42
PAAF1Q9BRP4 RNU6-267P-201ENST00000516714 103 ntBASIC-0.07□□□□□ -2.42
PAAF1Q9BRP4 MIR4773-1-201ENST00000637203 78 ntBASIC-0.07□□□□□ -2.42
PAAF1Q9BRP4 RNU6-219P-201ENST00000364728 107 ntBASIC-0.08□□□□□ -2.42
PAAF1Q9BRP4 RNU6-49P-201ENST00000384256 107 ntBASIC-0.08□□□□□ -2.42
PAAF1Q9BRP4 SNORD75.2-201ENST00000408784 58 ntBASIC-0.08□□□□□ -2.42
PAAF1Q9BRP4 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.08□□□□□ -2.42
PAAF1Q9BRP4 snoU13.17-201ENST00000458802 104 ntBASIC-0.08□□□□□ -2.42
PAAF1Q9BRP4 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.09□□□□□ -2.42
PAAF1Q9BRP4 AC104692.1-201ENST00000472406 90 ntBASIC-0.09□□□□□ -2.42
PAAF1Q9BRP4 IGLL4P-201ENST00000614590 133 ntBASIC-0.09□□□□□ -2.42
PAAF1Q9BRP4 MIR148A-201ENST00000362215 68 ntBASIC-0.1□□□□□ -2.43
PAAF1Q9BRP4 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.1□□□□□ -2.43
PAAF1Q9BRP4 RNU6-175P-201ENST00000516896 107 ntBASIC-0.1□□□□□ -2.43
PAAF1Q9BRP4 MIR548BB-201ENST00000626714 66 ntBASIC-0.1□□□□□ -2.43
PAAF1Q9BRP4 RNU6-208P-201ENST00000362431 107 ntBASIC-0.11□□□□□ -2.43
PAAF1Q9BRP4 RNA5SP98-201ENST00000363158 137 ntBASIC-0.11□□□□□ -2.43
PAAF1Q9BRP4 RNU6-302P-201ENST00000365249 107 ntBASIC-0.11□□□□□ -2.43
PAAF1Q9BRP4 RNU7-24P-201ENST00000458867 62 ntBASIC-0.11□□□□□ -2.43
PAAF1Q9BRP4 SNORD2-201ENST00000459163 69 ntBASIC-0.11□□□□□ -2.43
PAAF1Q9BRP4 RNU6-274P-201ENST00000459566 107 ntBASIC-0.11□□□□□ -2.43
PAAF1Q9BRP4 RNY1P1-201ENST00000364372 112 ntBASIC-0.12□□□□□ -2.43
PAAF1Q9BRP4 RNU6-382P-201ENST00000365181 106 ntBASIC-0.12□□□□□ -2.43
PAAF1Q9BRP4 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.12□□□□□ -2.43
PAAF1Q9BRP4 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.13□□□□□ -2.43
PAAF1Q9BRP4 RNU6-824P-201ENST00000363724 104 ntBASIC-0.13□□□□□ -2.43
PAAF1Q9BRP4 SNORD77.2-201ENST00000391045 68 ntBASIC-0.13□□□□□ -2.43
PAAF1Q9BRP4 MIR1295B-201ENST00000636144 60 ntBASIC-0.13□□□□□ -2.43
PAAF1Q9BRP4 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.13□□□□□ -2.43
PAAF1Q9BRP4 MIR6759-201ENST00000638110 65 ntBASIC-0.13□□□□□ -2.43
PAAF1Q9BRP4 RNU6-46P-201ENST00000383860 107 ntBASIC-0.14□□□□□ -2.43
PAAF1Q9BRP4 AL691482.2-201ENST00000457453 84 ntBASIC-0.14□□□□□ -2.43
PAAF1Q9BRP4 RNA5SP285-201ENST00000516619 119 ntBASIC-0.14□□□□□ -2.43
PAAF1Q9BRP4 RNU6-675P-201ENST00000384236 104 ntBASIC-0.15□□□□□ -2.43
PAAF1Q9BRP4 MIR548E-201ENST00000408287 88 ntBASIC-0.15□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 165.5 ms