Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 RNY4P3-201ENST00000365254 95 ntBASIC0.46□□□□□ -2.34
SMOQ99835 SNORA2A-201ENST00000383885 135 ntBASIC0.46□□□□□ -2.34
SMOQ99835 Y_RNA.388-201ENST00000383919 113 ntBASIC0.46□□□□□ -2.34
SMOQ99835 RNU6V-201ENST00000384105 107 ntBASIC0.46□□□□□ -2.34
SMOQ99835 SNORA26.2-201ENST00000390922 122 ntBASIC0.46□□□□□ -2.34
SMOQ99835 RNU6-592P-201ENST00000411333 103 ntBASIC0.46□□□□□ -2.34
SMOQ99835 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.46□□□□□ -2.34
SMOQ99835 RNU5B-6P-201ENST00000516765 68 ntBASIC0.46□□□□□ -2.34
SMOQ99835 YWHAEP2-201ENST00000580066 112 ntBASIC0.46□□□□□ -2.34
SMOQ99835 RNU6-54P-201ENST00000365563 107 ntBASIC0.45□□□□□ -2.34
SMOQ99835 Y_RNA.426-201ENST00000384068 113 ntBASIC0.45□□□□□ -2.34
SMOQ99835 MIR5706-201ENST00000579841 80 ntBASIC0.45□□□□□ -2.34
SMOQ99835 AC243829.6-201ENST00000612652 106 ntBASIC0.45□□□□□ -2.34
SMOQ99835 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
SMOQ99835 RNU5F-1-201ENST00000362507 117 ntBASIC0.44□□□□□ -2.34
SMOQ99835 RNU6-624P-201ENST00000363411 107 ntBASIC0.44□□□□□ -2.34
SMOQ99835 RNU6-1152P-201ENST00000384576 107 ntBASIC0.44□□□□□ -2.34
SMOQ99835 Y_RNA.607-201ENST00000410597 98 ntBASIC0.44□□□□□ -2.34
SMOQ99835 HMGN2P22-201ENST00000427588 175 ntBASIC0.44□□□□□ -2.34
SMOQ99835 RNU7-171P-201ENST00000459581 62 ntBASIC0.44□□□□□ -2.34
SMOQ99835 RNU6-863P-201ENST00000515989 104 ntBASIC0.44□□□□□ -2.34
SMOQ99835 MIR760-201ENST00000390220 80 ntBASIC0.43□□□□□ -2.34
SMOQ99835 MIR1265-201ENST00000408444 86 ntBASIC0.43□□□□□ -2.34
SMOQ99835 AL450471.1-201ENST00000447509 127 ntBASIC0.43□□□□□ -2.34
SMOQ99835 MIR4473-201ENST00000583731 91 ntBASIC0.43□□□□□ -2.34
SMOQ99835 RNU6-1276P-201ENST00000365372 104 ntBASIC0.42□□□□□ -2.34
SMOQ99835 RNU6-242P-201ENST00000384359 107 ntBASIC0.42□□□□□ -2.34
SMOQ99835 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.42□□□□□ -2.34
SMOQ99835 RNU6-1177P-201ENST00000391058 104 ntBASIC0.42□□□□□ -2.34
SMOQ99835 RNA5SP63-201ENST00000391225 112 ntBASIC0.42□□□□□ -2.34
SMOQ99835 MIR1302-4-201ENST00000408701 150 ntBASIC0.42□□□□□ -2.34
SMOQ99835 RNU6-848P-201ENST00000515948 107 ntBASIC0.42□□□□□ -2.34
SMOQ99835 RNU6-617P-201ENST00000516147 107 ntBASIC0.42□□□□□ -2.34
SMOQ99835 RNU6-473P-201ENST00000516164 107 ntBASIC0.42□□□□□ -2.34
SMOQ99835 RNU6-1049P-201ENST00000516414 107 ntBASIC0.42□□□□□ -2.34
SMOQ99835 RNU6-161P-201ENST00000363051 106 ntBASIC0.41□□□□□ -2.34
SMOQ99835 VTRNA1-3-201ENST00000365645 89 ntBASIC0.41□□□□□ -2.34
SMOQ99835 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
SMOQ99835 RNU6-1108P-201ENST00000516308 104 ntBASIC0.41□□□□□ -2.34
SMOQ99835 RNU6-208P-201ENST00000362431 107 ntBASIC0.4□□□□□ -2.35
SMOQ99835 RNU6-815P-201ENST00000384080 113 ntBASIC0.4□□□□□ -2.35
SMOQ99835 Y_RNA.437-201ENST00000384113 113 ntBASIC0.4□□□□□ -2.35
SMOQ99835 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.4□□□□□ -2.35
SMOQ99835 MIR501-201ENST00000390204 84 ntBASIC0.4□□□□□ -2.35
SMOQ99835 MIR4636-201ENST00000582271 80 ntBASIC0.4□□□□□ -2.35
SMOQ99835 RNU6-824P-201ENST00000363724 104 ntBASIC0.39□□□□□ -2.35
SMOQ99835 RNA5SP173-201ENST00000364857 136 ntBASIC0.39□□□□□ -2.35
SMOQ99835 RNA5SP128-201ENST00000365305 116 ntBASIC0.39□□□□□ -2.35
SMOQ99835 SNORD77.2-201ENST00000391045 68 ntBASIC0.39□□□□□ -2.35
SMOQ99835 RNU7-129P-201ENST00000516128 62 ntBASIC0.39□□□□□ -2.35
SMOQ99835 MIR548AE1-201ENST00000583292 70 ntBASIC0.39□□□□□ -2.35
SMOQ99835 Y_RNA.125-201ENST00000363371 111 ntBASIC0.38□□□□□ -2.35
SMOQ99835 RNU6-478P-201ENST00000363904 110 ntBASIC0.38□□□□□ -2.35
SMOQ99835 Y_RNA.316-201ENST00000365118 111 ntBASIC0.38□□□□□ -2.35
SMOQ99835 RNU6-573P-201ENST00000383938 106 ntBASIC0.38□□□□□ -2.35
SMOQ99835 AC073261.1-201ENST00000429409 121 ntBASIC0.38□□□□□ -2.35
SMOQ99835 SNORD42B-201ENST00000458893 67 ntBASIC0.38□□□□□ -2.35
SMOQ99835 AC097510.1-201ENST00000510945 133 ntBASIC0.38□□□□□ -2.35
SMOQ99835 AL627230.5-201ENST00000619807 58 ntBASIC0.38□□□□□ -2.35
SMOQ99835 MIR499B-201ENST00000636498 73 ntBASIC0.38□□□□□ -2.35
SMOQ99835 RNU6-495P-201ENST00000362995 107 ntBASIC0.37□□□□□ -2.35
SMOQ99835 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.37□□□□□ -2.35
SMOQ99835 U7.6-201ENST00000610841 64 ntBASIC0.37□□□□□ -2.35
SMOQ99835 SNORA9.1-201ENST00000362412 131 ntBASIC0.36□□□□□ -2.35
SMOQ99835 RNU6-787P-201ENST00000384032 107 ntBASIC0.36□□□□□ -2.35
SMOQ99835 RNU6-129P-201ENST00000391022 107 ntBASIC0.36□□□□□ -2.35
SMOQ99835 RNU6-557P-201ENST00000516842 110 ntBASIC0.36□□□□□ -2.35
SMOQ99835 MIR4666B-201ENST00000578142 81 ntBASIC0.36□□□□□ -2.35
SMOQ99835 MIR4677-201ENST00000584153 80 ntBASIC0.36□□□□□ -2.35
SMOQ99835 AC023932.2-201ENST00000603176 175 ntBASIC0.36□□□□□ -2.35
SMOQ99835 MIR6759-201ENST00000638110 65 ntBASIC0.36□□□□□ -2.35
SMOQ99835 AC090625.1-201ENST00000357130 210 ntBASIC0.35□□□□□ -2.35
SMOQ99835 RNU6-382P-201ENST00000365181 106 ntBASIC0.35□□□□□ -2.35
SMOQ99835 RNU6-1327P-201ENST00000365302 105 ntBASIC0.35□□□□□ -2.35
SMOQ99835 RNU6-652P-201ENST00000365488 107 ntBASIC0.35□□□□□ -2.35
SMOQ99835 Y_RNA.407-201ENST00000383986 113 ntBASIC0.35□□□□□ -2.35
SMOQ99835 MIR329-2-201ENST00000385029 84 ntBASIC0.35□□□□□ -2.35
SMOQ99835 AC108740.1-201ENST00000498629 225 ntBASIC0.35□□□□□ -2.35
SMOQ99835 AC069113.3-201ENST00000521019 150 ntBASIC0.35□□□□□ -2.35
SMOQ99835 MIR548AD-201ENST00000584780 82 ntBASIC0.35□□□□□ -2.35
SMOQ99835 Y_RNA.371-201ENST00000365591 113 ntBASIC0.34□□□□□ -2.36
SMOQ99835 SNORD75.2-201ENST00000408784 58 ntBASIC0.34□□□□□ -2.36
SMOQ99835 U6.81-201ENST00000612550 106 ntBASIC0.34□□□□□ -2.36
SMOQ99835 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
SMOQ99835 MIR652-201ENST00000385278 98 ntBASIC0.33□□□□□ -2.36
SMOQ99835 RNU7-24P-201ENST00000458867 62 ntBASIC0.33□□□□□ -2.36
SMOQ99835 Y_RNA.660-201ENST00000516002 120 ntBASIC0.33□□□□□ -2.36
SMOQ99835 uc_338.10-201ENST00000621872 182 ntBASIC0.33□□□□□ -2.36
SMOQ99835 MIR4773-1-201ENST00000637203 78 ntBASIC0.33□□□□□ -2.36
SMOQ99835 Y_RNA.12-201ENST00000362393 112 ntBASIC0.32□□□□□ -2.36
SMOQ99835 Y_RNA.264-201ENST00000364665 102 ntBASIC0.32□□□□□ -2.36
SMOQ99835 Y_RNA.313-201ENST00000365095 103 ntBASIC0.32□□□□□ -2.36
SMOQ99835 RNU6-127P-201ENST00000390897 107 ntBASIC0.32□□□□□ -2.36
SMOQ99835 Y_RNA.606-201ENST00000410579 103 ntBASIC0.32□□□□□ -2.36
SMOQ99835 MIR5589-201ENST00000579442 60 ntBASIC0.32□□□□□ -2.36
SMOQ99835 MIR4802-201ENST00000581881 80 ntBASIC0.32□□□□□ -2.36
SMOQ99835 MIRLET7A1-201ENST00000362295 80 ntBASIC0.31□□□□□ -2.36
SMOQ99835 RNU6-340P-201ENST00000364005 107 ntBASIC0.31□□□□□ -2.36
SMOQ99835 RNU6-686P-201ENST00000364839 107 ntBASIC0.31□□□□□ -2.36
SMOQ99835 RNU6-154P-201ENST00000384306 106 ntBASIC0.31□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 249.5 ms