Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.08□□□□□ -2.58
VPS35Q96QK1 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.08□□□□□ -2.58
VPS35Q96QK1 MIR4679-2-201ENST00000578358 77 ntBASIC-1.08□□□□□ -2.58
VPS35Q96QK1 MIR4499-201ENST00000584834 69 ntBASIC-1.08□□□□□ -2.58
VPS35Q96QK1 MIR4719-201ENST00000585233 84 ntBASIC-1.08□□□□□ -2.58
VPS35Q96QK1 AL353621.2-201ENST00000605340 133 ntBASIC-1.08□□□□□ -2.58
VPS35Q96QK1 SNORA24B-201ENST00000384176 131 ntBASIC-1.09□□□□□ -2.58
VPS35Q96QK1 MTND4LP9-201ENST00000427694 174 ntBASIC-1.09□□□□□ -2.58
VPS35Q96QK1 snoR1.1-201ENST00000628177 80 ntBASIC-1.09□□□□□ -2.58
VPS35Q96QK1 MIR382-201ENST00000637119 76 ntBASIC-1.09□□□□□ -2.58
VPS35Q96QK1 RNU6-990P-201ENST00000364385 104 ntBASIC-1.1□□□□□ -2.59
VPS35Q96QK1 RNU6-132P-201ENST00000383863 107 ntBASIC-1.1□□□□□ -2.59
VPS35Q96QK1 SCARNA18B-201ENST00000458806 135 ntBASIC-1.1□□□□□ -2.59
VPS35Q96QK1 MIR4464-201ENST00000580818 92 ntBASIC-1.1□□□□□ -2.59
VPS35Q96QK1 AL157777.2-201ENST00000258070 137 ntBASIC-1.11□□□□□ -2.59
VPS35Q96QK1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.11□□□□□ -2.59
VPS35Q96QK1 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.11□□□□□ -2.59
VPS35Q96QK1 SCARNA17-201ENST00000516183 144 ntBASIC-1.11□□□□□ -2.59
VPS35Q96QK1 MIR4439-201ENST00000583746 80 ntBASIC-1.11□□□□□ -2.59
VPS35Q96QK1 uc_338.19-201ENST00000616808 99 ntBASIC-1.11□□□□□ -2.59
VPS35Q96QK1 AC090617.8-201ENST00000623339 167 ntBASIC-1.11□□□□□ -2.59
VPS35Q96QK1 AC099654.10-201ENST00000640395 161 ntBASIC-1.11□□□□□ -2.59
VPS35Q96QK1 SNORA63.2-201ENST00000362603 126 ntBASIC-1.12□□□□□ -2.59
VPS35Q96QK1 MIR548U-201ENST00000390728 81 ntBASIC-1.12□□□□□ -2.59
VPS35Q96QK1 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.12□□□□□ -2.59
VPS35Q96QK1 AC068339.1-201ENST00000526965 141 ntBASIC-1.12□□□□□ -2.59
VPS35Q96QK1 YWHAEP3-201ENST00000582767 121 ntBASIC-1.12□□□□□ -2.59
VPS35Q96QK1 MIR3140-201ENST00000583685 90 ntBASIC-1.12□□□□□ -2.59
VPS35Q96QK1 SNORD45B-201ENST00000364617 72 ntBASIC-1.13□□□□□ -2.59
VPS35Q96QK1 SNORD18.2-201ENST00000459604 70 ntBASIC-1.13□□□□□ -2.59
VPS35Q96QK1 AC140658.3-201ENST00000567603 271 ntBASIC-1.13□□□□□ -2.59
VPS35Q96QK1 MIR3613-201ENST00000579844 87 ntBASIC-1.13□□□□□ -2.59
VPS35Q96QK1 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.14□□□□□ -2.59
VPS35Q96QK1 RNU6-886P-201ENST00000384319 105 ntBASIC-1.14□□□□□ -2.59
VPS35Q96QK1 MIR124-2-201ENST00000385081 109 ntBASIC-1.14□□□□□ -2.59
VPS35Q96QK1 SNORD57-201ENST00000448188 72 ntBASIC-1.14□□□□□ -2.59
VPS35Q96QK1 MIR3064-201ENST00000581130 66 ntBASIC-1.14□□□□□ -2.59
VPS35Q96QK1 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.15□□□□□ -2.59
VPS35Q96QK1 SNORD114-17-201ENST00000364699 75 ntBASIC-1.15□□□□□ -2.59
VPS35Q96QK1 SNORA62.4-201ENST00000365504 151 ntBASIC-1.15□□□□□ -2.59
VPS35Q96QK1 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.15□□□□□ -2.59
VPS35Q96QK1 SNORA40-201ENST00000388090 126 ntBASIC-1.15□□□□□ -2.59
VPS35Q96QK1 RNU6-644P-201ENST00000391155 98 ntBASIC-1.15□□□□□ -2.59
VPS35Q96QK1 RNY1P9-201ENST00000532431 109 ntBASIC-1.15□□□□□ -2.59
VPS35Q96QK1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.15□□□□□ -2.59
VPS35Q96QK1 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.16□□□□□ -2.6
VPS35Q96QK1 RNU7-24P-201ENST00000458867 62 ntBASIC-1.16□□□□□ -2.6
VPS35Q96QK1 AC021146.9-201ENST00000512503 156 ntBASIC-1.16□□□□□ -2.6
VPS35Q96QK1 AC104996.3-201ENST00000590718 94 ntBASIC-1.16□□□□□ -2.6
VPS35Q96QK1 AC103810.7-201ENST00000607821 91 ntBASIC-1.16□□□□□ -2.6
VPS35Q96QK1 RNU6-208P-201ENST00000362431 107 ntBASIC-1.17□□□□□ -2.6
VPS35Q96QK1 RNU6-813P-201ENST00000384691 107 ntBASIC-1.17□□□□□ -2.6
VPS35Q96QK1 SNORD75.2-201ENST00000408784 58 ntBASIC-1.17□□□□□ -2.6
VPS35Q96QK1 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.17□□□□□ -2.6
VPS35Q96QK1 MIR6888-201ENST00000621977 67 ntBASIC-1.17□□□□□ -2.6
VPS35Q96QK1 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.18□□□□□ -2.6
VPS35Q96QK1 RNU6-274P-201ENST00000459566 107 ntBASIC-1.18□□□□□ -2.6
VPS35Q96QK1 AL353803.5-201ENST00000599815 141 ntBASIC-1.18□□□□□ -2.6
VPS35Q96QK1 AL445584.3-201ENST00000617173 78 ntBASIC-1.18□□□□□ -2.6
VPS35Q96QK1 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.19□□□□□ -2.6
VPS35Q96QK1 SNORD90-201ENST00000391145 111 ntBASIC-1.19□□□□□ -2.6
VPS35Q96QK1 RNU6-257P-201ENST00000410238 98 ntBASIC-1.19□□□□□ -2.6
VPS35Q96QK1 RNU7-107P-201ENST00000459121 61 ntBASIC-1.19□□□□□ -2.6
VPS35Q96QK1 MIR5009-201ENST00000578736 100 ntBASIC-1.19□□□□□ -2.6
VPS35Q96QK1 MIR409-201ENST00000362237 79 ntBASIC-1.2□□□□□ -2.6
VPS35Q96QK1 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.2□□□□□ -2.6
VPS35Q96QK1 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.2□□□□□ -2.6
VPS35Q96QK1 MIR548A1-201ENST00000385041 97 ntBASIC-1.2□□□□□ -2.6
VPS35Q96QK1 SNORD4B-201ENST00000459083 72 ntBASIC-1.2□□□□□ -2.6
VPS35Q96QK1 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.2□□□□□ -2.6
VPS35Q96QK1 U6.96-201ENST00000636425 70 ntBASIC-1.2□□□□□ -2.6
VPS35Q96QK1 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.21□□□□□ -2.6
VPS35Q96QK1 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.21□□□□□ -2.6
VPS35Q96QK1 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.21□□□□□ -2.6
VPS35Q96QK1 RNU7-200P-201ENST00000516105 62 ntBASIC-1.21□□□□□ -2.6
VPS35Q96QK1 MIR378F-201ENST00000578143 78 ntBASIC-1.21□□□□□ -2.6
VPS35Q96QK1 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.22□□□□□ -2.6
VPS35Q96QK1 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.22□□□□□ -2.6
VPS35Q96QK1 RNA5SP292-201ENST00000390974 118 ntBASIC-1.22□□□□□ -2.6
VPS35Q96QK1 RNU6-519P-201ENST00000410590 108 ntBASIC-1.22□□□□□ -2.6
VPS35Q96QK1 snoU13.17-201ENST00000458802 104 ntBASIC-1.22□□□□□ -2.6
VPS35Q96QK1 MIR6738-201ENST00000619620 64 ntBASIC-1.22□□□□□ -2.6
VPS35Q96QK1 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.23□□□□□ -2.61
VPS35Q96QK1 MIR587-201ENST00000384845 96 ntBASIC-1.23□□□□□ -2.61
VPS35Q96QK1 RNA5SP470-201ENST00000516463 106 ntBASIC-1.23□□□□□ -2.61
VPS35Q96QK1 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.23□□□□□ -2.61
VPS35Q96QK1 snoU83B.1-201ENST00000517136 88 ntBASIC-1.23□□□□□ -2.61
VPS35Q96QK1 MIR548Z-201ENST00000584743 97 ntBASIC-1.23□□□□□ -2.61
VPS35Q96QK1 MIR3914-2-201ENST00000637339 95 ntBASIC-1.23□□□□□ -2.61
VPS35Q96QK1 RNU6-382P-201ENST00000365181 106 ntBASIC-1.24□□□□□ -2.61
VPS35Q96QK1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.24□□□□□ -2.61
VPS35Q96QK1 SNORD33.1-201ENST00000516213 88 ntBASIC-1.24□□□□□ -2.61
VPS35Q96QK1 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.25□□□□□ -2.61
VPS35Q96QK1 RNU6-62P-201ENST00000516526 102 ntBASIC-1.25□□□□□ -2.61
VPS35Q96QK1 MIR4324-201ENST00000584846 72 ntBASIC-1.25□□□□□ -2.61
VPS35Q96QK1 SNORA33.1-201ENST00000364957 130 ntBASIC-1.26□□□□□ -2.61
VPS35Q96QK1 RNU6-10P-201ENST00000384036 107 ntBASIC-1.26□□□□□ -2.61
VPS35Q96QK1 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.26□□□□□ -2.61
VPS35Q96QK1 RNU6-971P-201ENST00000516920 106 ntBASIC-1.26□□□□□ -2.61
VPS35Q96QK1 MIR4777-201ENST00000583710 86 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 213.5 ms