Protein–RNA interactions for Protein: Q96MP5

ZSWIM3, Zinc finger SWIM domain-containing protein 3, humanhuman

Predictions only

Length 696 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3Q96MP5 MIR7107-201ENST00000611489 80 ntBASIC0.91□□□□□ -2.26
ZSWIM3Q96MP5 RNU6-1241P-201ENST00000384536 107 ntBASIC0.9□□□□□ -2.27
ZSWIM3Q96MP5 RNA5SP268-201ENST00000516828 124 ntBASIC0.9□□□□□ -2.27
ZSWIM3Q96MP5 MIR4773-1-201ENST00000637203 78 ntBASIC0.9□□□□□ -2.27
ZSWIM3Q96MP5 RNU6V-201ENST00000384105 107 ntBASIC0.89□□□□□ -2.27
ZSWIM3Q96MP5 AC139453.2-201ENST00000487255 133 ntBASIC0.89□□□□□ -2.27
ZSWIM3Q96MP5 RNA5SP227-201ENST00000516184 113 ntBASIC0.89□□□□□ -2.27
ZSWIM3Q96MP5 MIR6779-201ENST00000617283 64 ntBASIC0.89□□□□□ -2.27
ZSWIM3Q96MP5 AC073869.9-201ENST00000641610 120 ntBASIC0.89□□□□□ -2.27
ZSWIM3Q96MP5 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.88□□□□□ -2.27
ZSWIM3Q96MP5 RNA5SP484-201ENST00000458857 111 ntBASIC0.88□□□□□ -2.27
ZSWIM3Q96MP5 RNU6-871P-201ENST00000516122 100 ntBASIC0.88□□□□□ -2.27
ZSWIM3Q96MP5 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.88□□□□□ -2.27
ZSWIM3Q96MP5 MIR4714-201ENST00000580728 77 ntBASIC0.88□□□□□ -2.27
ZSWIM3Q96MP5 AC069503.3-201ENST00000618674 145 ntBASIC0.88□□□□□ -2.27
ZSWIM3Q96MP5 MIR608-201ENST00000384820 100 ntBASIC0.87□□□□□ -2.27
ZSWIM3Q96MP5 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
ZSWIM3Q96MP5 RNA5SP222-201ENST00000411039 105 ntBASIC0.87□□□□□ -2.27
ZSWIM3Q96MP5 SNORD42B-201ENST00000458893 67 ntBASIC0.87□□□□□ -2.27
ZSWIM3Q96MP5 RPL39P28-201ENST00000465655 155 ntBASIC0.87□□□□□ -2.27
ZSWIM3Q96MP5 AC114801.3-201ENST00000510231 177 ntBASIC0.87□□□□□ -2.27
ZSWIM3Q96MP5 NAMPTP3-201ENST00000569273 224 ntBASIC0.87□□□□□ -2.27
ZSWIM3Q96MP5 MIR4460-201ENST00000577862 86 ntBASIC0.87□□□□□ -2.27
ZSWIM3Q96MP5 RNU6-1039P-201ENST00000383931 107 ntBASIC0.86□□□□□ -2.27
ZSWIM3Q96MP5 RNY1P8-201ENST00000383970 114 ntBASIC0.86□□□□□ -2.27
ZSWIM3Q96MP5 ACA64.5-201ENST00000516207 127 ntBASIC0.86□□□□□ -2.27
ZSWIM3Q96MP5 MIR140-201ENST00000385282 100 ntBASIC0.85□□□□□ -2.27
ZSWIM3Q96MP5 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
ZSWIM3Q96MP5 RNU6-539P-201ENST00000516665 103 ntBASIC0.85□□□□□ -2.27
ZSWIM3Q96MP5 RNA5SP517-201ENST00000364724 117 ntBASIC0.83□□□□□ -2.28
ZSWIM3Q96MP5 RNU1-29P-201ENST00000606574 126 ntBASIC0.83□□□□□ -2.28
ZSWIM3Q96MP5 MIR8053-201ENST00000613344 75 ntBASIC0.83□□□□□ -2.28
ZSWIM3Q96MP5 RNA5SP325-201ENST00000363756 130 ntBASIC0.82□□□□□ -2.28
ZSWIM3Q96MP5 SNORD115-22-201ENST00000364456 82 ntBASIC0.82□□□□□ -2.28
ZSWIM3Q96MP5 SNORD115-31-201ENST00000365318 82 ntBASIC0.82□□□□□ -2.28
ZSWIM3Q96MP5 MIR154-201ENST00000385243 84 ntBASIC0.82□□□□□ -2.28
ZSWIM3Q96MP5 AL691482.2-201ENST00000457453 84 ntBASIC0.82□□□□□ -2.28
ZSWIM3Q96MP5 SNORA40.17-201ENST00000517256 115 ntBASIC0.82□□□□□ -2.28
ZSWIM3Q96MP5 Y_RNA.205-201ENST00000364128 113 ntBASIC0.81□□□□□ -2.28
ZSWIM3Q96MP5 RNU6-110P-201ENST00000384508 104 ntBASIC0.81□□□□□ -2.28
ZSWIM3Q96MP5 RNU6-540P-201ENST00000384622 101 ntBASIC0.81□□□□□ -2.28
ZSWIM3Q96MP5 RNU6-351P-201ENST00000516097 100 ntBASIC0.81□□□□□ -2.28
ZSWIM3Q96MP5 PSMC1P5-201ENST00000512850 177 ntBASIC0.8□□□□□ -2.28
ZSWIM3Q96MP5 AC018659.1-201ENST00000551083 169 ntBASIC0.8□□□□□ -2.28
ZSWIM3Q96MP5 MIR6509-201ENST00000614603 85 ntBASIC0.8□□□□□ -2.28
ZSWIM3Q96MP5 MIR6835-201ENST00000621552 64 ntBASIC0.8□□□□□ -2.28
ZSWIM3Q96MP5 SNORD45.1-201ENST00000363181 77 ntBASIC0.79□□□□□ -2.28
ZSWIM3Q96MP5 SNORD118-201ENST00000363593 134 ntBASIC0.79□□□□□ -2.28
ZSWIM3Q96MP5 SNORA36.2-201ENST00000384004 127 ntBASIC0.79□□□□□ -2.28
ZSWIM3Q96MP5 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
ZSWIM3Q96MP5 RNU6-604P-201ENST00000390917 100 ntBASIC0.79□□□□□ -2.28
ZSWIM3Q96MP5 MIR5706-201ENST00000579841 80 ntBASIC0.79□□□□□ -2.28
ZSWIM3Q96MP5 RN7SL793P-201ENST00000583259 296 ntBASIC0.79□□□□□ -2.28
ZSWIM3Q96MP5 MIR3657-201ENST00000584818 117 ntBASIC0.79□□□□□ -2.28
ZSWIM3Q96MP5 SNORA70.25-201ENST00000612741 95 ntBASIC0.79□□□□□ -2.28
ZSWIM3Q96MP5 SNORA2.1-201ENST00000363089 137 ntBASIC0.78□□□□□ -2.28
ZSWIM3Q96MP5 SNORD114-2-201ENST00000363953 78 ntBASIC0.78□□□□□ -2.28
ZSWIM3Q96MP5 MIR508-201ENST00000384857 115 ntBASIC0.78□□□□□ -2.28
ZSWIM3Q96MP5 MIR216A-201ENST00000385063 110 ntBASIC0.78□□□□□ -2.28
ZSWIM3Q96MP5 AC006210.1-201ENST00000424882 111 ntBASIC0.78□□□□□ -2.28
ZSWIM3Q96MP5 RNU5B-6P-201ENST00000516765 68 ntBASIC0.78□□□□□ -2.28
ZSWIM3Q96MP5 AC092634.7-201ENST00000621022 103 ntBASIC0.78□□□□□ -2.28
ZSWIM3Q96MP5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
ZSWIM3Q96MP5 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.77□□□□□ -2.29
ZSWIM3Q96MP5 SNORD114-4-201ENST00000363962 75 ntBASIC0.77□□□□□ -2.29
ZSWIM3Q96MP5 RNU6-590P-201ENST00000365039 107 ntBASIC0.77□□□□□ -2.29
ZSWIM3Q96MP5 SNORD45A-201ENST00000384512 84 ntBASIC0.76□□□□□ -2.29
ZSWIM3Q96MP5 SNORD110-201ENST00000408189 75 ntBASIC0.76□□□□□ -2.29
ZSWIM3Q96MP5 SNORA40.8-201ENST00000411034 126 ntBASIC0.76□□□□□ -2.29
ZSWIM3Q96MP5 RNU6-881P-201ENST00000516813 102 ntBASIC0.76□□□□□ -2.29
ZSWIM3Q96MP5 SNORA25.18-201ENST00000607153 114 ntBASIC0.76□□□□□ -2.29
ZSWIM3Q96MP5 MIR6513-201ENST00000621188 64 ntBASIC0.76□□□□□ -2.29
ZSWIM3Q96MP5 Y_RNA.407-201ENST00000383986 113 ntBASIC0.75□□□□□ -2.29
ZSWIM3Q96MP5 RNU6-260P-201ENST00000384092 107 ntBASIC0.75□□□□□ -2.29
ZSWIM3Q96MP5 MIR4653-201ENST00000585107 83 ntBASIC0.75□□□□□ -2.29
ZSWIM3Q96MP5 AL590095.2-201ENST00000604136 117 ntBASIC0.75□□□□□ -2.29
ZSWIM3Q96MP5 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
ZSWIM3Q96MP5 SNORD113.1-201ENST00000363280 73 ntBASIC0.74□□□□□ -2.29
ZSWIM3Q96MP5 RNU6-990P-201ENST00000364385 104 ntBASIC0.74□□□□□ -2.29
ZSWIM3Q96MP5 RNU6-788P-201ENST00000390967 104 ntBASIC0.74□□□□□ -2.29
ZSWIM3Q96MP5 MIR4752-201ENST00000579672 72 ntBASIC0.74□□□□□ -2.29
ZSWIM3Q96MP5 MIR548AE1-201ENST00000583292 70 ntBASIC0.74□□□□□ -2.29
ZSWIM3Q96MP5 Y_RNA.386-201ENST00000383913 105 ntBASIC0.73□□□□□ -2.29
ZSWIM3Q96MP5 SNORD116-24-201ENST00000384549 92 ntBASIC0.73□□□□□ -2.29
ZSWIM3Q96MP5 MIR203A-201ENST00000384836 110 ntBASIC0.73□□□□□ -2.29
ZSWIM3Q96MP5 MIR518A1-201ENST00000385068 85 ntBASIC0.73□□□□□ -2.29
ZSWIM3Q96MP5 RNU6-663P-201ENST00000391105 106 ntBASIC0.73□□□□□ -2.29
ZSWIM3Q96MP5 MIR936-201ENST00000401264 98 ntBASIC0.73□□□□□ -2.29
ZSWIM3Q96MP5 HMGN2P22-201ENST00000427588 175 ntBASIC0.73□□□□□ -2.29
ZSWIM3Q96MP5 AC069271.1-201ENST00000445577 156 ntBASIC0.73□□□□□ -2.29
ZSWIM3Q96MP5 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.72□□□□□ -2.29
ZSWIM3Q96MP5 Y_RNA.250-201ENST00000364542 110 ntBASIC0.72□□□□□ -2.29
ZSWIM3Q96MP5 RNU6-649P-201ENST00000384463 107 ntBASIC0.72□□□□□ -2.29
ZSWIM3Q96MP5 RNU6-848P-201ENST00000515948 107 ntBASIC0.72□□□□□ -2.29
ZSWIM3Q96MP5 RNU6-617P-201ENST00000516147 107 ntBASIC0.72□□□□□ -2.29
ZSWIM3Q96MP5 RNU6-473P-201ENST00000516164 107 ntBASIC0.72□□□□□ -2.29
ZSWIM3Q96MP5 SCARNA17.3-201ENST00000516381 125 ntBASIC0.72□□□□□ -2.29
ZSWIM3Q96MP5 RNU6-1049P-201ENST00000516414 107 ntBASIC0.72□□□□□ -2.29
ZSWIM3Q96MP5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.72□□□□□ -2.29
ZSWIM3Q96MP5 U6.111-201ENST00000636093 83 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 248.6 ms