Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 SNORA63.2-201ENST00000362603 126 ntBASIC-0.05□□□□□ -2.42
CHMP4CQ96CF2 SNORD114-16-201ENST00000363044 70 ntBASIC-0.05□□□□□ -2.42
CHMP4CQ96CF2 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.05□□□□□ -2.42
CHMP4CQ96CF2 RNU6-147P-201ENST00000383983 107 ntBASIC-0.05□□□□□ -2.42
CHMP4CQ96CF2 RNA5SP292-201ENST00000390974 118 ntBASIC-0.05□□□□□ -2.42
CHMP4CQ96CF2 RNU7-188P-201ENST00000517063 64 ntBASIC-0.05□□□□□ -2.42
CHMP4CQ96CF2 MIR6514-201ENST00000622549 70 ntBASIC-0.05□□□□□ -2.42
CHMP4CQ96CF2 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.06□□□□□ -2.42
CHMP4CQ96CF2 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.06□□□□□ -2.42
CHMP4CQ96CF2 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.06□□□□□ -2.42
CHMP4CQ96CF2 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.06□□□□□ -2.42
CHMP4CQ96CF2 MTATP6P29-201ENST00000415057 132 ntBASIC-0.06□□□□□ -2.42
CHMP4CQ96CF2 SNORA18.5-201ENST00000516616 101 ntBASIC-0.06□□□□□ -2.42
CHMP4CQ96CF2 MIR4290-201ENST00000583807 95 ntBASIC-0.06□□□□□ -2.42
CHMP4CQ96CF2 MIR6759-201ENST00000638110 65 ntBASIC-0.06□□□□□ -2.42
CHMP4CQ96CF2 RNU6-54P-201ENST00000365563 107 ntBASIC-0.08□□□□□ -2.42
CHMP4CQ96CF2 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
CHMP4CQ96CF2 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.08□□□□□ -2.42
CHMP4CQ96CF2 CR383656.4-201ENST00000546909 122 ntBASIC-0.08□□□□□ -2.42
CHMP4CQ96CF2 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.09□□□□□ -2.42
CHMP4CQ96CF2 RNU7-165P-201ENST00000458864 60 ntBASIC-0.09□□□□□ -2.42
CHMP4CQ96CF2 SNORD114-4-201ENST00000363962 75 ntBASIC-0.1□□□□□ -2.43
CHMP4CQ96CF2 MIR1236-201ENST00000408340 102 ntBASIC-0.1□□□□□ -2.43
CHMP4CQ96CF2 RNU6-180P-201ENST00000516697 61 ntBASIC-0.1□□□□□ -2.43
CHMP4CQ96CF2 MIR3140-201ENST00000583685 90 ntBASIC-0.1□□□□□ -2.43
CHMP4CQ96CF2 MIR20A-201ENST00000362279 71 ntBASIC-0.11□□□□□ -2.43
CHMP4CQ96CF2 RNU6-929P-201ENST00000384429 107 ntBASIC-0.11□□□□□ -2.43
CHMP4CQ96CF2 MIR652-201ENST00000385278 98 ntBASIC-0.11□□□□□ -2.43
CHMP4CQ96CF2 RNU6-762P-201ENST00000517107 102 ntBASIC-0.11□□□□□ -2.43
CHMP4CQ96CF2 MALAT1.1-201ENST00000618249 95 ntBASIC-0.11□□□□□ -2.43
CHMP4CQ96CF2 RNU5F-1-201ENST00000362507 117 ntBASIC-0.12□□□□□ -2.43
CHMP4CQ96CF2 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.12□□□□□ -2.43
CHMP4CQ96CF2 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-0.12□□□□□ -2.43
CHMP4CQ96CF2 MIR148A-201ENST00000362215 68 ntBASIC-0.13□□□□□ -2.43
CHMP4CQ96CF2 AC104692.1-201ENST00000472406 90 ntBASIC-0.13□□□□□ -2.43
CHMP4CQ96CF2 RN7SL660P-201ENST00000614852 299 ntBASIC-0.13□□□□□ -2.43
CHMP4CQ96CF2 RNU6-35P-201ENST00000384530 107 ntBASIC-0.14□□□□□ -2.43
CHMP4CQ96CF2 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.14□□□□□ -2.43
CHMP4CQ96CF2 MIR4796-201ENST00000580742 81 ntBASIC-0.14□□□□□ -2.43
CHMP4CQ96CF2 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.14□□□□□ -2.43
CHMP4CQ96CF2 AC244090.1-201ENST00000441884 93 ntBASIC-0.15□□□□□ -2.43
CHMP4CQ96CF2 IGLVI-20-201ENST00000519296 130 ntBASIC-0.15□□□□□ -2.43
CHMP4CQ96CF2 MIR1295B-201ENST00000636144 60 ntBASIC-0.15□□□□□ -2.43
CHMP4CQ96CF2 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.16□□□□□ -2.44
CHMP4CQ96CF2 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.17□□□□□ -2.44
CHMP4CQ96CF2 MIR106A-201ENST00000384870 81 ntBASIC-0.18□□□□□ -2.44
CHMP4CQ96CF2 MIR519C-201ENST00000385053 87 ntBASIC-0.18□□□□□ -2.44
CHMP4CQ96CF2 RNU6-640P-201ENST00000363693 105 ntBASIC-0.19□□□□□ -2.44
CHMP4CQ96CF2 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.19□□□□□ -2.44
CHMP4CQ96CF2 RNU6-46P-201ENST00000383860 107 ntBASIC-0.19□□□□□ -2.44
CHMP4CQ96CF2 SNORA24B-201ENST00000384176 131 ntBASIC-0.19□□□□□ -2.44
CHMP4CQ96CF2 RNU6-905P-201ENST00000384434 107 ntBASIC-0.19□□□□□ -2.44
CHMP4CQ96CF2 RNU6-168P-201ENST00000516189 101 ntBASIC-0.19□□□□□ -2.44
CHMP4CQ96CF2 RNA5SP98-201ENST00000363158 137 ntBASIC-0.2□□□□□ -2.44
CHMP4CQ96CF2 SNORD116-22-201ENST00000384430 92 ntBASIC-0.2□□□□□ -2.44
CHMP4CQ96CF2 SNORD90-201ENST00000391145 111 ntBASIC-0.2□□□□□ -2.44
CHMP4CQ96CF2 MIR4668-201ENST00000582284 70 ntBASIC-0.2□□□□□ -2.44
CHMP4CQ96CF2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.21□□□□□ -2.44
CHMP4CQ96CF2 SNORD115-37-201ENST00000363768 82 ntBASIC-0.21□□□□□ -2.44
CHMP4CQ96CF2 RNU6-175P-201ENST00000516896 107 ntBASIC-0.21□□□□□ -2.44
CHMP4CQ96CF2 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.22□□□□□ -2.44
CHMP4CQ96CF2 SNORD42B-201ENST00000458893 67 ntBASIC-0.22□□□□□ -2.44
CHMP4CQ96CF2 RNU6-495P-201ENST00000362995 107 ntBASIC-0.23□□□□□ -2.45
CHMP4CQ96CF2 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.23□□□□□ -2.45
CHMP4CQ96CF2 RNU6-302P-201ENST00000365249 107 ntBASIC-0.23□□□□□ -2.45
CHMP4CQ96CF2 SNORD2-201ENST00000459163 69 ntBASIC-0.23□□□□□ -2.45
CHMP4CQ96CF2 MIR5589-201ENST00000579442 60 ntBASIC-0.23□□□□□ -2.45
CHMP4CQ96CF2 AC006254.2-201ENST00000603259 279 ntBASIC-0.23□□□□□ -2.45
CHMP4CQ96CF2 RNU6-633P-201ENST00000362612 103 ntBASIC-0.24□□□□□ -2.45
CHMP4CQ96CF2 SNORD115-27-201ENST00000364430 82 ntBASIC-0.24□□□□□ -2.45
CHMP4CQ96CF2 SNORD75.2-201ENST00000408784 58 ntBASIC-0.24□□□□□ -2.45
CHMP4CQ96CF2 RNU7-153P-201ENST00000516455 62 ntBASIC-0.24□□□□□ -2.45
CHMP4CQ96CF2 MIR4802-201ENST00000581881 80 ntBASIC-0.24□□□□□ -2.45
CHMP4CQ96CF2 RNU6-153P-201ENST00000364422 104 ntBASIC-0.25□□□□□ -2.45
CHMP4CQ96CF2 MIR488-201ENST00000365739 83 ntBASIC-0.25□□□□□ -2.45
CHMP4CQ96CF2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
CHMP4CQ96CF2 RNA5SP89-201ENST00000410300 108 ntBASIC-0.25□□□□□ -2.45
CHMP4CQ96CF2 RNU7-24P-201ENST00000458867 62 ntBASIC-0.25□□□□□ -2.45
CHMP4CQ96CF2 SNORD114-31-201ENST00000363219 75 ntBASIC-0.26□□□□□ -2.45
CHMP4CQ96CF2 MIR214-201ENST00000385214 110 ntBASIC-0.26□□□□□ -2.45
CHMP4CQ96CF2 AC097510.1-201ENST00000510945 133 ntBASIC-0.26□□□□□ -2.45
CHMP4CQ96CF2 RNA5SP476-201ENST00000516613 103 ntBASIC-0.26□□□□□ -2.45
CHMP4CQ96CF2 SNORA32.1-201ENST00000364514 115 ntBASIC-0.27□□□□□ -2.45
CHMP4CQ96CF2 SNORD114-12-201ENST00000365400 75 ntBASIC-0.27□□□□□ -2.45
CHMP4CQ96CF2 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.27□□□□□ -2.45
CHMP4CQ96CF2 Z95118.1-201ENST00000421372 247 ntBASIC-0.27□□□□□ -2.45
CHMP4CQ96CF2 MIR4636-201ENST00000582271 80 ntBASIC-0.27□□□□□ -2.45
CHMP4CQ96CF2 SNORA18.1-201ENST00000363418 128 ntBASIC-0.28□□□□□ -2.45
CHMP4CQ96CF2 MIR1265-201ENST00000408444 86 ntBASIC-0.28□□□□□ -2.45
CHMP4CQ96CF2 MIR4773-1-201ENST00000637203 78 ntBASIC-0.28□□□□□ -2.45
CHMP4CQ96CF2 MIR6086-201ENST00000638065 55 ntBASIC-0.28□□□□□ -2.45
CHMP4CQ96CF2 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.29□□□□□ -2.46
CHMP4CQ96CF2 SNORD49B-201ENST00000365172 72 ntBASIC-0.29□□□□□ -2.46
CHMP4CQ96CF2 MIR548E-201ENST00000408287 88 ntBASIC-0.29□□□□□ -2.46
CHMP4CQ96CF2 RNU6-402P-201ENST00000410678 103 ntBASIC-0.29□□□□□ -2.46
CHMP4CQ96CF2 AL450471.1-201ENST00000447509 127 ntBASIC-0.29□□□□□ -2.46
CHMP4CQ96CF2 RNY1P7-201ENST00000384743 110 ntBASIC-0.3□□□□□ -2.46
CHMP4CQ96CF2 snoU13.17-201ENST00000458802 104 ntBASIC-0.3□□□□□ -2.46
CHMP4CQ96CF2 MIR4645-201ENST00000583158 77 ntBASIC-0.3□□□□□ -2.46
CHMP4CQ96CF2 RNU6-382P-201ENST00000365181 106 ntBASIC-0.31□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 234.2 ms