Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.86□□□□□ -2.27
SIMC1Q8NDZ2 MIR18A-201ENST00000362310 71 ntBASIC0.85□□□□□ -2.27
SIMC1Q8NDZ2 RNU6-495P-201ENST00000362995 107 ntBASIC0.85□□□□□ -2.27
SIMC1Q8NDZ2 RNA5SP457-201ENST00000363657 124 ntBASIC0.85□□□□□ -2.27
SIMC1Q8NDZ2 AC093423.1-201ENST00000440817 142 ntBASIC0.85□□□□□ -2.27
SIMC1Q8NDZ2 RNU6-634P-201ENST00000459134 106 ntBASIC0.85□□□□□ -2.27
SIMC1Q8NDZ2 RNU6-274P-201ENST00000459566 107 ntBASIC0.85□□□□□ -2.27
SIMC1Q8NDZ2 RNU6-871P-201ENST00000516122 100 ntBASIC0.85□□□□□ -2.27
SIMC1Q8NDZ2 Y_RNA.30-201ENST00000362572 97 ntBASIC0.84□□□□□ -2.27
SIMC1Q8NDZ2 RNU6-54P-201ENST00000365563 107 ntBASIC0.84□□□□□ -2.27
SIMC1Q8NDZ2 RNU6-788P-201ENST00000390967 104 ntBASIC0.84□□□□□ -2.27
SIMC1Q8NDZ2 SNORD75.2-201ENST00000408784 58 ntBASIC0.84□□□□□ -2.27
SIMC1Q8NDZ2 RNU7-24P-201ENST00000458867 62 ntBASIC0.84□□□□□ -2.27
SIMC1Q8NDZ2 AL590095.2-201ENST00000604136 117 ntBASIC0.84□□□□□ -2.27
SIMC1Q8NDZ2 MIR6828-201ENST00000636181 60 ntBASIC0.84□□□□□ -2.27
SIMC1Q8NDZ2 RNU6V-201ENST00000384105 107 ntBASIC0.83□□□□□ -2.28
SIMC1Q8NDZ2 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
SIMC1Q8NDZ2 MIR154-201ENST00000385243 84 ntBASIC0.83□□□□□ -2.28
SIMC1Q8NDZ2 RNU6-269P-201ENST00000391077 97 ntBASIC0.83□□□□□ -2.28
SIMC1Q8NDZ2 NAMPTP3-201ENST00000569273 224 ntBASIC0.83□□□□□ -2.28
SIMC1Q8NDZ2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
SIMC1Q8NDZ2 SNORA36.1-201ENST00000363424 132 ntBASIC0.82□□□□□ -2.28
SIMC1Q8NDZ2 Y_RNA.178-201ENST00000363832 102 ntBASIC0.82□□□□□ -2.28
SIMC1Q8NDZ2 SNORD115-31-201ENST00000365318 82 ntBASIC0.82□□□□□ -2.28
SIMC1Q8NDZ2 RNU4-45P-201ENST00000365469 141 ntBASIC0.82□□□□□ -2.28
SIMC1Q8NDZ2 MT-TY-201ENST00000387409 66 ntBASIC0.82□□□□□ -2.28
SIMC1Q8NDZ2 RNU6-752P-201ENST00000516376 102 ntBASIC0.82□□□□□ -2.28
SIMC1Q8NDZ2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.82□□□□□ -2.28
SIMC1Q8NDZ2 SNORD45.1-201ENST00000363181 77 ntBASIC0.81□□□□□ -2.28
SIMC1Q8NDZ2 RNU1-141P-201ENST00000364623 158 ntBASIC0.81□□□□□ -2.28
SIMC1Q8NDZ2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
SIMC1Q8NDZ2 AL691482.2-201ENST00000457453 84 ntBASIC0.81□□□□□ -2.28
SIMC1Q8NDZ2 MIR4460-201ENST00000577862 86 ntBASIC0.81□□□□□ -2.28
SIMC1Q8NDZ2 SNORA8.2-201ENST00000384372 139 ntBASIC0.8□□□□□ -2.28
SIMC1Q8NDZ2 RNU6-540P-201ENST00000384622 101 ntBASIC0.8□□□□□ -2.28
SIMC1Q8NDZ2 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
SIMC1Q8NDZ2 SNORD42B-201ENST00000458893 67 ntBASIC0.8□□□□□ -2.28
SIMC1Q8NDZ2 RNA5SP227-201ENST00000516184 113 ntBASIC0.8□□□□□ -2.28
SIMC1Q8NDZ2 RNU6-539P-201ENST00000516665 103 ntBASIC0.8□□□□□ -2.28
SIMC1Q8NDZ2 RNA5SP94-201ENST00000516917 108 ntBASIC0.8□□□□□ -2.28
SIMC1Q8NDZ2 AL162376.1-201ENST00000624117 175 ntBASIC0.8□□□□□ -2.28
SIMC1Q8NDZ2 RNU6-1039P-201ENST00000383931 107 ntBASIC0.79□□□□□ -2.28
SIMC1Q8NDZ2 RNA5SP222-201ENST00000411039 105 ntBASIC0.79□□□□□ -2.28
SIMC1Q8NDZ2 RNA5SP484-201ENST00000458857 111 ntBASIC0.79□□□□□ -2.28
SIMC1Q8NDZ2 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.79□□□□□ -2.28
SIMC1Q8NDZ2 RNA5SP268-201ENST00000516828 124 ntBASIC0.79□□□□□ -2.28
SIMC1Q8NDZ2 SNORD115-22-201ENST00000364456 82 ntBASIC0.78□□□□□ -2.28
SIMC1Q8NDZ2 SNORD45A-201ENST00000384512 84 ntBASIC0.78□□□□□ -2.28
SIMC1Q8NDZ2 MIR6509-201ENST00000614603 85 ntBASIC0.78□□□□□ -2.28
SIMC1Q8NDZ2 MIR6513-201ENST00000621188 64 ntBASIC0.78□□□□□ -2.28
SIMC1Q8NDZ2 AC010487.4-201ENST00000637027 61 ntBASIC0.78□□□□□ -2.28
SIMC1Q8NDZ2 MIR924-201ENST00000638017 53 ntBASIC0.78□□□□□ -2.28
SIMC1Q8NDZ2 Y_RNA.68-201ENST00000362881 102 ntBASIC0.77□□□□□ -2.29
SIMC1Q8NDZ2 SNORD114-23-201ENST00000363536 72 ntBASIC0.77□□□□□ -2.29
SIMC1Q8NDZ2 SNORD114-2-201ENST00000363953 78 ntBASIC0.77□□□□□ -2.29
SIMC1Q8NDZ2 Y_RNA.340-201ENST00000365330 92 ntBASIC0.77□□□□□ -2.29
SIMC1Q8NDZ2 RNU6-649P-201ENST00000384463 107 ntBASIC0.77□□□□□ -2.29
SIMC1Q8NDZ2 RNU6-604P-201ENST00000390917 100 ntBASIC0.77□□□□□ -2.29
SIMC1Q8NDZ2 SNORD30.1-201ENST00000391309 70 ntBASIC0.77□□□□□ -2.29
SIMC1Q8NDZ2 RNU5B-6P-201ENST00000516765 68 ntBASIC0.77□□□□□ -2.29
SIMC1Q8NDZ2 MIR8053-201ENST00000613344 75 ntBASIC0.77□□□□□ -2.29
SIMC1Q8NDZ2 Y_RNA.115-201ENST00000363272 98 ntBASIC0.76□□□□□ -2.29
SIMC1Q8NDZ2 MIR203A-201ENST00000384836 110 ntBASIC0.76□□□□□ -2.29
SIMC1Q8NDZ2 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
SIMC1Q8NDZ2 AC018659.1-201ENST00000551083 169 ntBASIC0.76□□□□□ -2.29
SIMC1Q8NDZ2 MIR4714-201ENST00000580728 77 ntBASIC0.76□□□□□ -2.29
SIMC1Q8NDZ2 MIR7107-201ENST00000611489 80 ntBASIC0.76□□□□□ -2.29
SIMC1Q8NDZ2 RNU6-590P-201ENST00000365039 107 ntBASIC0.75□□□□□ -2.29
SIMC1Q8NDZ2 RNY1P8-201ENST00000383970 114 ntBASIC0.75□□□□□ -2.29
SIMC1Q8NDZ2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.75□□□□□ -2.29
SIMC1Q8NDZ2 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.75□□□□□ -2.29
SIMC1Q8NDZ2 AC069503.3-201ENST00000618674 145 ntBASIC0.75□□□□□ -2.29
SIMC1Q8NDZ2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
SIMC1Q8NDZ2 SNORD113.1-201ENST00000363280 73 ntBASIC0.74□□□□□ -2.29
SIMC1Q8NDZ2 Y_RNA.386-201ENST00000383913 105 ntBASIC0.74□□□□□ -2.29
SIMC1Q8NDZ2 RNU6-663P-201ENST00000391105 106 ntBASIC0.74□□□□□ -2.29
SIMC1Q8NDZ2 RNU6-881P-201ENST00000516813 102 ntBASIC0.74□□□□□ -2.29
SIMC1Q8NDZ2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.73□□□□□ -2.29
SIMC1Q8NDZ2 SNORA36.2-201ENST00000384004 127 ntBASIC0.73□□□□□ -2.29
SIMC1Q8NDZ2 RNU6-260P-201ENST00000384092 107 ntBASIC0.73□□□□□ -2.29
SIMC1Q8NDZ2 RNU6-895P-201ENST00000384125 103 ntBASIC0.73□□□□□ -2.29
SIMC1Q8NDZ2 MIR1265-201ENST00000408444 86 ntBASIC0.73□□□□□ -2.29
SIMC1Q8NDZ2 AC125388.1-201ENST00000459631 156 ntBASIC0.73□□□□□ -2.29
SIMC1Q8NDZ2 MIR3657-201ENST00000584818 117 ntBASIC0.73□□□□□ -2.29
SIMC1Q8NDZ2 U6.111-201ENST00000636093 83 ntBASIC0.73□□□□□ -2.29
SIMC1Q8NDZ2 AC073869.9-201ENST00000641610 120 ntBASIC0.73□□□□□ -2.29
SIMC1Q8NDZ2 RNU6-990P-201ENST00000364385 104 ntBASIC0.72□□□□□ -2.29
SIMC1Q8NDZ2 SNORA40.17-201ENST00000517256 115 ntBASIC0.72□□□□□ -2.29
SIMC1Q8NDZ2 RNA5SP517-201ENST00000364724 117 ntBASIC0.71□□□□□ -2.3
SIMC1Q8NDZ2 RNU6-800P-201ENST00000384473 103 ntBASIC0.71□□□□□ -2.3
SIMC1Q8NDZ2 MIR936-201ENST00000401264 98 ntBASIC0.71□□□□□ -2.3
SIMC1Q8NDZ2 RNA5SP121-201ENST00000516537 101 ntBASIC0.71□□□□□ -2.3
SIMC1Q8NDZ2 MIR4752-201ENST00000579672 72 ntBASIC0.71□□□□□ -2.3
SIMC1Q8NDZ2 AL109933.3-201ENST00000619095 188 ntBASIC0.71□□□□□ -2.3
SIMC1Q8NDZ2 RNU6-1216P-201ENST00000362590 107 ntBASIC0.7□□□□□ -2.3
SIMC1Q8NDZ2 Y_RNA.433-201ENST00000384089 102 ntBASIC0.7□□□□□ -2.3
SIMC1Q8NDZ2 SNORD116-24-201ENST00000384549 92 ntBASIC0.7□□□□□ -2.3
SIMC1Q8NDZ2 MIR9-2-201ENST00000384838 87 ntBASIC0.7□□□□□ -2.3
SIMC1Q8NDZ2 MIR140-201ENST00000385282 100 ntBASIC0.7□□□□□ -2.3
SIMC1Q8NDZ2 SNORD110-201ENST00000408189 75 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms