Protein–RNA interactions for Protein: Q8IX90

SKA3, Spindle and kinetochore-associated protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3Q8IX90 RNU6-904P-201ENST00000516206 101 ntBASIC-0.67□□□□□ -2.52
SKA3Q8IX90 MIR5589-201ENST00000579442 60 ntBASIC-0.67□□□□□ -2.52
SKA3Q8IX90 RNU6-704P-201ENST00000364162 103 ntBASIC-0.68□□□□□ -2.52
SKA3Q8IX90 SNORA63.6-201ENST00000364921 119 ntBASIC-0.68□□□□□ -2.52
SKA3Q8IX90 SNORA24B-201ENST00000384176 131 ntBASIC-0.68□□□□□ -2.52
SKA3Q8IX90 MIR204-201ENST00000385200 110 ntBASIC-0.68□□□□□ -2.52
SKA3Q8IX90 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.68□□□□□ -2.52
SKA3Q8IX90 SNORA3B-201ENST00000391305 131 ntBASIC-0.68□□□□□ -2.52
SKA3Q8IX90 SCARNA23-201ENST00000516060 130 ntBASIC-0.68□□□□□ -2.52
SKA3Q8IX90 RNU6-502P-201ENST00000362419 108 ntBASIC-0.69□□□□□ -2.52
SKA3Q8IX90 RNU6-495P-201ENST00000362995 107 ntBASIC-0.69□□□□□ -2.52
SKA3Q8IX90 RNU6-973P-201ENST00000364690 107 ntBASIC-0.69□□□□□ -2.52
SKA3Q8IX90 RNU6-887P-201ENST00000410660 100 ntBASIC-0.69□□□□□ -2.52
SKA3Q8IX90 RPS29P8-201ENST00000445109 171 ntBASIC-0.69□□□□□ -2.52
SKA3Q8IX90 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.69□□□□□ -2.52
SKA3Q8IX90 MIR4493-201ENST00000584016 73 ntBASIC-0.69□□□□□ -2.52
SKA3Q8IX90 MIR6851-201ENST00000617060 67 ntBASIC-0.69□□□□□ -2.52
SKA3Q8IX90 MIR101-1-201ENST00000362265 75 ntBASIC-0.7□□□□□ -2.52
SKA3Q8IX90 SNORD114-14-201ENST00000362723 75 ntBASIC-0.7□□□□□ -2.52
SKA3Q8IX90 RNY4P3-201ENST00000365254 95 ntBASIC-0.7□□□□□ -2.52
SKA3Q8IX90 RNU6-476P-201ENST00000384726 107 ntBASIC-0.7□□□□□ -2.52
SKA3Q8IX90 RNU6-62P-201ENST00000516526 102 ntBASIC-0.7□□□□□ -2.52
SKA3Q8IX90 MIR4636-201ENST00000582271 80 ntBASIC-0.7□□□□□ -2.52
SKA3Q8IX90 AL391099.1-201ENST00000624635 187 ntBASIC-0.7□□□□□ -2.52
SKA3Q8IX90 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.71□□□□□ -2.52
SKA3Q8IX90 RNU4-32P-201ENST00000363404 141 ntBASIC-0.71□□□□□ -2.52
SKA3Q8IX90 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.71□□□□□ -2.52
SKA3Q8IX90 RNU6-972P-201ENST00000391208 107 ntBASIC-0.71□□□□□ -2.52
SKA3Q8IX90 SNORD75.2-201ENST00000408784 58 ntBASIC-0.71□□□□□ -2.52
SKA3Q8IX90 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.71□□□□□ -2.52
SKA3Q8IX90 SNORD38.3-201ENST00000516599 73 ntBASIC-0.71□□□□□ -2.52
SKA3Q8IX90 SNORA18.5-201ENST00000516616 101 ntBASIC-0.71□□□□□ -2.52
SKA3Q8IX90 MIR4280-201ENST00000582178 76 ntBASIC-0.71□□□□□ -2.52
SKA3Q8IX90 RNU6-990P-201ENST00000364385 104 ntBASIC-0.72□□□□□ -2.52
SKA3Q8IX90 SNORD90-201ENST00000391145 111 ntBASIC-0.72□□□□□ -2.52
SKA3Q8IX90 MTATP6P29-201ENST00000415057 132 ntBASIC-0.72□□□□□ -2.52
SKA3Q8IX90 AC021146.9-201ENST00000512503 156 ntBASIC-0.72□□□□□ -2.52
SKA3Q8IX90 AC021146.6-201ENST00000514659 117 ntBASIC-0.72□□□□□ -2.52
SKA3Q8IX90 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.72□□□□□ -2.52
SKA3Q8IX90 MIR6773-201ENST00000612812 74 ntBASIC-0.72□□□□□ -2.52
SKA3Q8IX90 RNU5F-1-201ENST00000362507 117 ntBASIC-0.73□□□□□ -2.53
SKA3Q8IX90 RNU6-746P-201ENST00000384112 109 ntBASIC-0.73□□□□□ -2.53
SKA3Q8IX90 MIR5704-201ENST00000584029 77 ntBASIC-0.73□□□□□ -2.53
SKA3Q8IX90 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.74□□□□□ -2.53
SKA3Q8IX90 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.74□□□□□ -2.53
SKA3Q8IX90 SNORD58A-201ENST00000383875 65 ntBASIC-0.74□□□□□ -2.53
SKA3Q8IX90 SNORD75.1-201ENST00000408373 60 ntBASIC-0.74□□□□□ -2.53
SKA3Q8IX90 RNU7-24P-201ENST00000458867 62 ntBASIC-0.74□□□□□ -2.53
SKA3Q8IX90 RNU7-61P-201ENST00000515897 61 ntBASIC-0.74□□□□□ -2.53
SKA3Q8IX90 snoR1.1-201ENST00000628177 80 ntBASIC-0.74□□□□□ -2.53
SKA3Q8IX90 SNORD116-10-201ENST00000363791 102 ntBASIC-0.75□□□□□ -2.53
SKA3Q8IX90 RNU6-959P-201ENST00000384671 107 ntBASIC-0.75□□□□□ -2.53
SKA3Q8IX90 MIRLET7B-201ENST00000385140 83 ntBASIC-0.75□□□□□ -2.53
SKA3Q8IX90 MIR1302-5-201ENST00000408164 150 ntBASIC-0.75□□□□□ -2.53
SKA3Q8IX90 AC008267.6-201ENST00000441664 139 ntBASIC-0.75□□□□□ -2.53
SKA3Q8IX90 SNORA13-201ENST00000458790 133 ntBASIC-0.75□□□□□ -2.53
SKA3Q8IX90 MIR590-201ENST00000385008 97 ntBASIC-0.76□□□□□ -2.53
SKA3Q8IX90 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.76□□□□□ -2.53
SKA3Q8IX90 MIR4436A-201ENST00000585278 85 ntBASIC-0.76□□□□□ -2.53
SKA3Q8IX90 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.77□□□□□ -2.53
SKA3Q8IX90 Y_RNA.107-201ENST00000363190 121 ntBASIC-0.77□□□□□ -2.53
SKA3Q8IX90 RNA5SP451-201ENST00000410588 110 ntBASIC-0.77□□□□□ -2.53
SKA3Q8IX90 AC026421.1-201ENST00000519101 163 ntBASIC-0.77□□□□□ -2.53
SKA3Q8IX90 AC006254.2-201ENST00000603259 279 ntBASIC-0.77□□□□□ -2.53
SKA3Q8IX90 RNU6-382P-201ENST00000365181 106 ntBASIC-0.78□□□□□ -2.53
SKA3Q8IX90 RNU6-592P-201ENST00000411333 103 ntBASIC-0.78□□□□□ -2.53
SKA3Q8IX90 RNU6-537P-201ENST00000517277 103 ntBASIC-0.78□□□□□ -2.53
SKA3Q8IX90 MIR6854-201ENST00000614935 69 ntBASIC-0.78□□□□□ -2.53
SKA3Q8IX90 MT-TR-201ENST00000387439 65 ntBASIC-0.79□□□□□ -2.54
SKA3Q8IX90 RNU6-337P-201ENST00000391243 106 ntBASIC-0.79□□□□□ -2.54
SKA3Q8IX90 RNU6-554P-201ENST00000410466 106 ntBASIC-0.79□□□□□ -2.54
SKA3Q8IX90 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.79□□□□□ -2.54
SKA3Q8IX90 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.79□□□□□ -2.54
SKA3Q8IX90 MIR4773-1-201ENST00000637203 78 ntBASIC-0.79□□□□□ -2.54
SKA3Q8IX90 SNORD115-23-201ENST00000364461 82 ntBASIC-0.8□□□□□ -2.54
SKA3Q8IX90 MIR518B-201ENST00000385127 83 ntBASIC-0.8□□□□□ -2.54
SKA3Q8IX90 MIR3179-1-201ENST00000578940 84 ntBASIC-0.8□□□□□ -2.54
SKA3Q8IX90 MIR3179-2-201ENST00000579107 84 ntBASIC-0.8□□□□□ -2.54
SKA3Q8IX90 MIR3179-3-201ENST00000579566 84 ntBASIC-0.8□□□□□ -2.54
SKA3Q8IX90 MIR4796-201ENST00000580742 81 ntBASIC-0.8□□□□□ -2.54
SKA3Q8IX90 AL365222.1-201ENST00000614661 98 ntBASIC-0.8□□□□□ -2.54
SKA3Q8IX90 MIR6129-201ENST00000616087 109 ntBASIC-0.8□□□□□ -2.54
SKA3Q8IX90 MIR3179-4-201ENST00000617599 84 ntBASIC-0.8□□□□□ -2.54
SKA3Q8IX90 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.8□□□□□ -2.54
SKA3Q8IX90 RNU6-824P-201ENST00000363724 104 ntBASIC-0.81□□□□□ -2.54
SKA3Q8IX90 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.81□□□□□ -2.54
SKA3Q8IX90 SNORA19-201ENST00000384737 128 ntBASIC-0.81□□□□□ -2.54
SKA3Q8IX90 SNORD22.1-201ENST00000516331 125 ntBASIC-0.81□□□□□ -2.54
SKA3Q8IX90 MIR8068-201ENST00000618032 68 ntBASIC-0.81□□□□□ -2.54
SKA3Q8IX90 U6.96-201ENST00000636425 70 ntBASIC-0.81□□□□□ -2.54
SKA3Q8IX90 RNU6-106P-201ENST00000384405 107 ntBASIC-0.82□□□□□ -2.54
SKA3Q8IX90 MIR604-201ENST00000384880 94 ntBASIC-0.82□□□□□ -2.54
SKA3Q8IX90 RNU6-162P-201ENST00000516228 103 ntBASIC-0.82□□□□□ -2.54
SKA3Q8IX90 Y_RNA.93-201ENST00000363066 109 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.83□□□□□ -2.54
SKA3Q8IX90 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-0.83□□□□□ -2.54
SKA3Q8IX90 snoU13.17-201ENST00000458802 104 ntBASIC-0.83□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms