Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 RNU6-905P-201ENST00000384434 107 ntBASIC-1.19□□□□□ -2.6
NUDCD3Q8IVD9 RNU6-813P-201ENST00000384691 107 ntBASIC-1.19□□□□□ -2.6
NUDCD3Q8IVD9 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.19□□□□□ -2.6
NUDCD3Q8IVD9 SNORD4B-201ENST00000459083 72 ntBASIC-1.19□□□□□ -2.6
NUDCD3Q8IVD9 RNU6-182P-201ENST00000516970 105 ntBASIC-1.19□□□□□ -2.6
NUDCD3Q8IVD9 AL353621.2-201ENST00000605340 133 ntBASIC-1.19□□□□□ -2.6
NUDCD3Q8IVD9 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.2□□□□□ -2.6
NUDCD3Q8IVD9 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.2□□□□□ -2.6
NUDCD3Q8IVD9 MIR196A1-201ENST00000388006 70 ntBASIC-1.2□□□□□ -2.6
NUDCD3Q8IVD9 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.2□□□□□ -2.6
NUDCD3Q8IVD9 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.21□□□□□ -2.6
NUDCD3Q8IVD9 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.21□□□□□ -2.6
NUDCD3Q8IVD9 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
NUDCD3Q8IVD9 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.21□□□□□ -2.6
NUDCD3Q8IVD9 AC021146.9-201ENST00000512503 156 ntBASIC-1.21□□□□□ -2.6
NUDCD3Q8IVD9 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.22□□□□□ -2.6
NUDCD3Q8IVD9 SNORD114-25-201ENST00000363742 72 ntBASIC-1.22□□□□□ -2.6
NUDCD3Q8IVD9 RNY4P3-201ENST00000365254 95 ntBASIC-1.22□□□□□ -2.6
NUDCD3Q8IVD9 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.22□□□□□ -2.6
NUDCD3Q8IVD9 SNORD75.2-201ENST00000408784 58 ntBASIC-1.22□□□□□ -2.6
NUDCD3Q8IVD9 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.22□□□□□ -2.6
NUDCD3Q8IVD9 MIR5009-201ENST00000578736 100 ntBASIC-1.22□□□□□ -2.6
NUDCD3Q8IVD9 RNU6-886P-201ENST00000384319 105 ntBASIC-1.23□□□□□ -2.61
NUDCD3Q8IVD9 SNORA40-201ENST00000388090 126 ntBASIC-1.23□□□□□ -2.61
NUDCD3Q8IVD9 RNU7-24P-201ENST00000458867 62 ntBASIC-1.23□□□□□ -2.61
NUDCD3Q8IVD9 RNU7-107P-201ENST00000459121 61 ntBASIC-1.23□□□□□ -2.61
NUDCD3Q8IVD9 MIR548AX-201ENST00000580117 73 ntBASIC-1.23□□□□□ -2.61
NUDCD3Q8IVD9 MIR548Z-201ENST00000584743 97 ntBASIC-1.23□□□□□ -2.61
NUDCD3Q8IVD9 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.24□□□□□ -2.61
NUDCD3Q8IVD9 RNA5SP292-201ENST00000390974 118 ntBASIC-1.24□□□□□ -2.61
NUDCD3Q8IVD9 RNU6-519P-201ENST00000410590 108 ntBASIC-1.24□□□□□ -2.61
NUDCD3Q8IVD9 RNU6-257P-201ENST00000410238 98 ntBASIC-1.25□□□□□ -2.61
NUDCD3Q8IVD9 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.25□□□□□ -2.61
NUDCD3Q8IVD9 U6.96-201ENST00000636425 70 ntBASIC-1.25□□□□□ -2.61
NUDCD3Q8IVD9 MIR548A1-201ENST00000385041 97 ntBASIC-1.26□□□□□ -2.61
NUDCD3Q8IVD9 SNORD83B-201ENST00000386745 93 ntBASIC-1.26□□□□□ -2.61
NUDCD3Q8IVD9 SNORD90-201ENST00000391145 111 ntBASIC-1.26□□□□□ -2.61
NUDCD3Q8IVD9 SNORD18.2-201ENST00000459604 70 ntBASIC-1.26□□□□□ -2.61
NUDCD3Q8IVD9 RNU6-62P-201ENST00000516526 102 ntBASIC-1.26□□□□□ -2.61
NUDCD3Q8IVD9 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.26□□□□□ -2.61
NUDCD3Q8IVD9 YWHAEP3-201ENST00000582767 121 ntBASIC-1.27□□□□□ -2.61
NUDCD3Q8IVD9 MIR4777-201ENST00000583710 86 ntBASIC-1.27□□□□□ -2.61
NUDCD3Q8IVD9 AC099654.10-201ENST00000640395 161 ntBASIC-1.27□□□□□ -2.61
NUDCD3Q8IVD9 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.28□□□□□ -2.61
NUDCD3Q8IVD9 SNORA62.4-201ENST00000365504 151 ntBASIC-1.28□□□□□ -2.61
NUDCD3Q8IVD9 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.28□□□□□ -2.61
NUDCD3Q8IVD9 snoU13.19-201ENST00000459148 104 ntBASIC-1.28□□□□□ -2.61
NUDCD3Q8IVD9 RNU6-795P-201ENST00000516323 103 ntBASIC-1.28□□□□□ -2.61
NUDCD3Q8IVD9 SNORA18.5-201ENST00000516616 101 ntBASIC-1.28□□□□□ -2.61
NUDCD3Q8IVD9 RNU6-208P-201ENST00000362431 107 ntBASIC-1.29□□□□□ -2.62
NUDCD3Q8IVD9 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.29□□□□□ -2.62
NUDCD3Q8IVD9 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.29□□□□□ -2.62
NUDCD3Q8IVD9 MIR124-2-201ENST00000385081 109 ntBASIC-1.29□□□□□ -2.62
NUDCD3Q8IVD9 RNU7-200P-201ENST00000516105 62 ntBASIC-1.29□□□□□ -2.62
NUDCD3Q8IVD9 SNORD33.1-201ENST00000516213 88 ntBASIC-1.29□□□□□ -2.62
NUDCD3Q8IVD9 AC090617.8-201ENST00000623339 167 ntBASIC-1.29□□□□□ -2.62
NUDCD3Q8IVD9 MIR3914-2-201ENST00000637339 95 ntBASIC-1.29□□□□□ -2.62
NUDCD3Q8IVD9 RNU6-382P-201ENST00000365181 106 ntBASIC-1.3□□□□□ -2.62
NUDCD3Q8IVD9 MTATP6P29-201ENST00000415057 132 ntBASIC-1.3□□□□□ -2.62
NUDCD3Q8IVD9 SCARNA17-201ENST00000516183 144 ntBASIC-1.3□□□□□ -2.62
NUDCD3Q8IVD9 AC006254.2-201ENST00000603259 279 ntBASIC-1.3□□□□□ -2.62
NUDCD3Q8IVD9 AC012531.4-201ENST00000616509 177 ntBASIC-1.3□□□□□ -2.62
NUDCD3Q8IVD9 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.31□□□□□ -2.62
NUDCD3Q8IVD9 RNU6-971P-201ENST00000516920 106 ntBASIC-1.31□□□□□ -2.62
NUDCD3Q8IVD9 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.31□□□□□ -2.62
NUDCD3Q8IVD9 MIR4719-201ENST00000585233 84 ntBASIC-1.31□□□□□ -2.62
NUDCD3Q8IVD9 MIR548I1-201ENST00000408810 149 ntBASIC-1.32□□□□□ -2.62
NUDCD3Q8IVD9 AL500527.2-201ENST00000454105 95 ntBASIC-1.32□□□□□ -2.62
NUDCD3Q8IVD9 snoU13.17-201ENST00000458802 104 ntBASIC-1.32□□□□□ -2.62
NUDCD3Q8IVD9 MIR548A3-201ENST00000385297 97 ntBASIC-1.33□□□□□ -2.62
NUDCD3Q8IVD9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.33□□□□□ -2.62
NUDCD3Q8IVD9 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.33□□□□□ -2.62
NUDCD3Q8IVD9 MIR4773-1-201ENST00000637203 78 ntBASIC-1.33□□□□□ -2.62
NUDCD3Q8IVD9 RNU6-431P-201ENST00000383874 107 ntBASIC-1.34□□□□□ -2.62
NUDCD3Q8IVD9 RNU6-260P-201ENST00000384092 107 ntBASIC-1.34□□□□□ -2.62
NUDCD3Q8IVD9 RNU6-30P-201ENST00000384561 107 ntBASIC-1.34□□□□□ -2.62
NUDCD3Q8IVD9 SNORD64-201ENST00000386683 67 ntBASIC-1.34□□□□□ -2.62
NUDCD3Q8IVD9 RNA5SP147-201ENST00000516493 109 ntBASIC-1.34□□□□□ -2.62
NUDCD3Q8IVD9 AL353803.5-201ENST00000599815 141 ntBASIC-1.34□□□□□ -2.62
NUDCD3Q8IVD9 MIR6738-201ENST00000619620 64 ntBASIC-1.34□□□□□ -2.62
NUDCD3Q8IVD9 RNU4-32P-201ENST00000363404 141 ntBASIC-1.35□□□□□ -2.63
NUDCD3Q8IVD9 MIR147A-201ENST00000385079 72 ntBASIC-1.35□□□□□ -2.63
NUDCD3Q8IVD9 RNA5SP476-201ENST00000516613 103 ntBASIC-1.35□□□□□ -2.63
NUDCD3Q8IVD9 MIR4464-201ENST00000580818 92 ntBASIC-1.35□□□□□ -2.63
NUDCD3Q8IVD9 RNU5F-1-201ENST00000362507 117 ntBASIC-1.36□□□□□ -2.63
NUDCD3Q8IVD9 RNU6-824P-201ENST00000363724 104 ntBASIC-1.36□□□□□ -2.63
NUDCD3Q8IVD9 SNORD114-17-201ENST00000364699 75 ntBASIC-1.36□□□□□ -2.63
NUDCD3Q8IVD9 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.36□□□□□ -2.63
NUDCD3Q8IVD9 MIR203A-201ENST00000384836 110 ntBASIC-1.36□□□□□ -2.63
NUDCD3Q8IVD9 RNU6-346P-201ENST00000516288 111 ntBASIC-1.36□□□□□ -2.63
NUDCD3Q8IVD9 RNA5SP67-201ENST00000516422 131 ntBASIC-1.36□□□□□ -2.63
NUDCD3Q8IVD9 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.36□□□□□ -2.63
NUDCD3Q8IVD9 U6.95-201ENST00000636931 70 ntBASIC-1.36□□□□□ -2.63
NUDCD3Q8IVD9 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.37□□□□□ -2.63
NUDCD3Q8IVD9 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.37□□□□□ -2.63
NUDCD3Q8IVD9 RNU6-80P-201ENST00000384195 107 ntBASIC-1.37□□□□□ -2.63
NUDCD3Q8IVD9 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.37□□□□□ -2.63
NUDCD3Q8IVD9 MIR4324-201ENST00000584846 72 ntBASIC-1.37□□□□□ -2.63
NUDCD3Q8IVD9 MIR6509-201ENST00000614603 85 ntBASIC-1.37□□□□□ -2.63
NUDCD3Q8IVD9 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.38□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 168.5 ms