Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 RNU6-649P-201ENST00000384463 107 ntBASIC1.17□□□□□ -2.22
TRIM50Q86XT4 RNU6-540P-201ENST00000384622 101 ntBASIC1.17□□□□□ -2.22
TRIM50Q86XT4 MIR140-201ENST00000385282 100 ntBASIC1.17□□□□□ -2.22
TRIM50Q86XT4 SNORD30.1-201ENST00000391309 70 ntBASIC1.17□□□□□ -2.22
TRIM50Q86XT4 AC073869.9-201ENST00000641610 120 ntBASIC1.17□□□□□ -2.22
TRIM50Q86XT4 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRIM50Q86XT4 SNORD115-22-201ENST00000364456 82 ntBASIC1.16□□□□□ -2.22
TRIM50Q86XT4 MIR1285-1-201ENST00000408593 84 ntBASIC1.16□□□□□ -2.22
TRIM50Q86XT4 AC006210.1-201ENST00000424882 111 ntBASIC1.16□□□□□ -2.22
TRIM50Q86XT4 AC018659.1-201ENST00000551083 169 ntBASIC1.16□□□□□ -2.22
TRIM50Q86XT4 RNA5SP517-201ENST00000364724 117 ntBASIC1.15□□□□□ -2.23
TRIM50Q86XT4 RNU6-881P-201ENST00000516813 102 ntBASIC1.15□□□□□ -2.23
TRIM50Q86XT4 MIR4752-201ENST00000579672 72 ntBASIC1.15□□□□□ -2.23
TRIM50Q86XT4 snoU13.18-201ENST00000459483 104 ntBASIC1.14□□□□□ -2.23
TRIM50Q86XT4 RNU6-539P-201ENST00000516665 103 ntBASIC1.14□□□□□ -2.23
TRIM50Q86XT4 MIR373-201ENST00000362273 69 ntBASIC1.13□□□□□ -2.23
TRIM50Q86XT4 RNU4-38P-201ENST00000364472 129 ntBASIC1.13□□□□□ -2.23
TRIM50Q86XT4 RNU6-663P-201ENST00000391105 106 ntBASIC1.13□□□□□ -2.23
TRIM50Q86XT4 SNORD110-201ENST00000408189 75 ntBASIC1.13□□□□□ -2.23
TRIM50Q86XT4 MIR3657-201ENST00000584818 117 ntBASIC1.13□□□□□ -2.23
TRIM50Q86XT4 SNORA25.18-201ENST00000607153 114 ntBASIC1.13□□□□□ -2.23
TRIM50Q86XT4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.13□□□□□ -2.23
TRIM50Q86XT4 AC092634.7-201ENST00000621022 103 ntBASIC1.13□□□□□ -2.23
TRIM50Q86XT4 RNU6-990P-201ENST00000364385 104 ntBASIC1.12□□□□□ -2.23
TRIM50Q86XT4 RNU6-260P-201ENST00000384092 107 ntBASIC1.12□□□□□ -2.23
TRIM50Q86XT4 MIR4473-201ENST00000583731 91 ntBASIC1.12□□□□□ -2.23
TRIM50Q86XT4 MIR3973-201ENST00000579824 107 ntBASIC1.11□□□□□ -2.23
TRIM50Q86XT4 SNORA70.25-201ENST00000612741 95 ntBASIC1.11□□□□□ -2.23
TRIM50Q86XT4 MIR6734-201ENST00000621166 68 ntBASIC1.11□□□□□ -2.23
TRIM50Q86XT4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
TRIM50Q86XT4 SNORD113.1-201ENST00000363280 73 ntBASIC1.1□□□□□ -2.23
TRIM50Q86XT4 SNORD114-4-201ENST00000363962 75 ntBASIC1.1□□□□□ -2.23
TRIM50Q86XT4 RNU6-788P-201ENST00000390967 104 ntBASIC1.1□□□□□ -2.23
TRIM50Q86XT4 MIR548J-201ENST00000408833 112 ntBASIC1.1□□□□□ -2.23
TRIM50Q86XT4 RNA5SP147-201ENST00000516493 109 ntBASIC1.1□□□□□ -2.23
TRIM50Q86XT4 AC069271.1-201ENST00000445577 156 ntBASIC1.09□□□□□ -2.23
TRIM50Q86XT4 RNA5SP220-201ENST00000516298 104 ntBASIC1.09□□□□□ -2.23
TRIM50Q86XT4 MIR6788-201ENST00000618842 66 ntBASIC1.09□□□□□ -2.23
TRIM50Q86XT4 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
TRIM50Q86XT4 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
TRIM50Q86XT4 RNU6-1187P-201ENST00000364771 110 ntBASIC1.08□□□□□ -2.24
TRIM50Q86XT4 Y_RNA.407-201ENST00000383986 113 ntBASIC1.08□□□□□ -2.24
TRIM50Q86XT4 MIR151B-201ENST00000584249 96 ntBASIC1.08□□□□□ -2.24
TRIM50Q86XT4 RNU6-42P-201ENST00000384165 107 ntBASIC1.07□□□□□ -2.24
TRIM50Q86XT4 RNU6-982P-201ENST00000516216 102 ntBASIC1.07□□□□□ -2.24
TRIM50Q86XT4 AC211469.2-201ENST00000605461 205 ntBASIC1.07□□□□□ -2.24
TRIM50Q86XT4 AC022709.1-201ENST00000615967 87 ntBASIC1.07□□□□□ -2.24
TRIM50Q86XT4 U6.111-201ENST00000636093 83 ntBASIC1.07□□□□□ -2.24
TRIM50Q86XT4 RNU6-590P-201ENST00000365039 107 ntBASIC1.06□□□□□ -2.24
TRIM50Q86XT4 MIR7-2-201ENST00000384970 110 ntBASIC1.06□□□□□ -2.24
TRIM50Q86XT4 PSMC1P5-201ENST00000512850 177 ntBASIC1.06□□□□□ -2.24
TRIM50Q86XT4 MIR548AE1-201ENST00000583292 70 ntBASIC1.06□□□□□ -2.24
TRIM50Q86XT4 RNU6-1216P-201ENST00000362590 107 ntBASIC1.05□□□□□ -2.24
TRIM50Q86XT4 MIR532-201ENST00000385025 91 ntBASIC1.05□□□□□ -2.24
TRIM50Q86XT4 SNORA40.8-201ENST00000411034 126 ntBASIC1.05□□□□□ -2.24
TRIM50Q86XT4 MIR4698-201ENST00000577795 80 ntBASIC1.05□□□□□ -2.24
TRIM50Q86XT4 SNORA2.1-201ENST00000363089 137 ntBASIC1.04□□□□□ -2.24
TRIM50Q86XT4 RNU6-110P-201ENST00000384508 104 ntBASIC1.04□□□□□ -2.24
TRIM50Q86XT4 SNORD71-201ENST00000411292 86 ntBASIC1.04□□□□□ -2.24
TRIM50Q86XT4 SNORD118-201ENST00000363593 134 ntBASIC1.03□□□□□ -2.24
TRIM50Q86XT4 MIR652-201ENST00000385278 98 ntBASIC1.03□□□□□ -2.24
TRIM50Q86XT4 SNORA40.17-201ENST00000517256 115 ntBASIC1.03□□□□□ -2.24
TRIM50Q86XT4 RNU6-800P-201ENST00000384473 103 ntBASIC1.02□□□□□ -2.25
TRIM50Q86XT4 RPL39P28-201ENST00000465655 155 ntBASIC1.02□□□□□ -2.25
TRIM50Q86XT4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.02□□□□□ -2.25
TRIM50Q86XT4 RNU6-630P-201ENST00000391258 106 ntBASIC1.01□□□□□ -2.25
TRIM50Q86XT4 RNU4-54P-201ENST00000516428 129 ntBASIC1.01□□□□□ -2.25
TRIM50Q86XT4 AL590095.2-201ENST00000604136 117 ntBASIC1.01□□□□□ -2.25
TRIM50Q86XT4 RNU1-29P-201ENST00000606574 126 ntBASIC1.01□□□□□ -2.25
TRIM50Q86XT4 SNORD116-24-201ENST00000384549 92 ntBASIC1□□□□□ -2.25
TRIM50Q86XT4 snoU13.13-201ENST00000458842 104 ntBASIC1□□□□□ -2.25
TRIM50Q86XT4 RNA5SP436-201ENST00000516020 115 ntBASIC1□□□□□ -2.25
TRIM50Q86XT4 SCARNA17.3-201ENST00000516381 125 ntBASIC1□□□□□ -2.25
TRIM50Q86XT4 AC103810.9-201ENST00000606688 112 ntBASIC1□□□□□ -2.25
TRIM50Q86XT4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.99□□□□□ -2.25
TRIM50Q86XT4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.99□□□□□ -2.25
TRIM50Q86XT4 MTND4LP1-201ENST00000446263 157 ntBASIC0.99□□□□□ -2.25
TRIM50Q86XT4 RNU6-645P-201ENST00000364649 106 ntBASIC0.98□□□□□ -2.25
TRIM50Q86XT4 Y_RNA.443-201ENST00000384135 111 ntBASIC0.98□□□□□ -2.25
TRIM50Q86XT4 MIR518A1-201ENST00000385068 85 ntBASIC0.98□□□□□ -2.25
TRIM50Q86XT4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
TRIM50Q86XT4 HMGN2P22-201ENST00000427588 175 ntBASIC0.98□□□□□ -2.25
TRIM50Q86XT4 CYP3A137P-201ENST00000562436 69 ntBASIC0.98□□□□□ -2.25
TRIM50Q86XT4 MIR6857-201ENST00000613267 93 ntBASIC0.98□□□□□ -2.25
TRIM50Q86XT4 MIR6515-201ENST00000619843 57 ntBASIC0.98□□□□□ -2.25
TRIM50Q86XT4 uc_338.10-201ENST00000621872 182 ntBASIC0.98□□□□□ -2.25
TRIM50Q86XT4 RNU6-229P-201ENST00000516614 102 ntBASIC0.97□□□□□ -2.25
TRIM50Q86XT4 MIR5706-201ENST00000579841 80 ntBASIC0.97□□□□□ -2.25
TRIM50Q86XT4 RNU6-668P-201ENST00000364180 107 ntBASIC0.96□□□□□ -2.26
TRIM50Q86XT4 Y_RNA.340-201ENST00000365330 92 ntBASIC0.96□□□□□ -2.26
TRIM50Q86XT4 SNORA2A-201ENST00000383885 135 ntBASIC0.96□□□□□ -2.26
TRIM50Q86XT4 Y_RNA.386-201ENST00000383913 105 ntBASIC0.96□□□□□ -2.26
TRIM50Q86XT4 AC125388.1-201ENST00000459631 156 ntBASIC0.96□□□□□ -2.26
TRIM50Q86XT4 AC021146.9-201ENST00000512503 156 ntBASIC0.96□□□□□ -2.26
TRIM50Q86XT4 MIR5000-201ENST00000577717 103 ntBASIC0.96□□□□□ -2.26
TRIM50Q86XT4 AC005520.4-201ENST00000604337 90 ntBASIC0.96□□□□□ -2.26
TRIM50Q86XT4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
TRIM50Q86XT4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.94□□□□□ -2.26
TRIM50Q86XT4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
TRIM50Q86XT4 SNORA25.4-201ENST00000363666 124 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms